BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031334
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]   132   3e-29
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]   132   3e-29
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   129   3e-28
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]        120   9e-26
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   119   3e-25

>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
          Length = 1562

 Score =  132 bits (332), Expect = 3e-29
 Identities = 62/96 (64%), Positives = 75/96 (78%), Gaps = 1/96 (1%)
 Frame = -1

Query: 318  AVNTACHLVNISPSTTIDCKTPHEVWSGKPADYSDLKVFGCPAYYHVRDRKIDPRAKKGV 139
            AVNTA +LVN SPST ID KTP EVWSGKP++YS LK+FGCPAY HV D K++PRA K +
Sbjct: 723  AVNTAAYLVNRSPSTAIDFKTPQEVWSGKPSNYSGLKIFGCPAYAHVSDGKLEPRAMKCI 782

Query: 138  FIGYVDGTKGYRIW-SLDPPQRFVISRDVTFNEKFM 34
            F+GY  G KGYR+W + D   +F+ISRDVTF+E  M
Sbjct: 783  FLGYATGVKGYRLWCTEDRTPKFIISRDVTFDESAM 818


>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score =  132 bits (332), Expect = 3e-29
 Identities = 62/96 (64%), Positives = 75/96 (78%), Gaps = 1/96 (1%)
 Frame = -1

Query: 318  AVNTACHLVNISPSTTIDCKTPHEVWSGKPADYSDLKVFGCPAYYHVRDRKIDPRAKKGV 139
            AVNTA +LVN SPST ID KTP EVWSGKP++YS LK+FGCPAY HV D K++PRA K +
Sbjct: 936  AVNTAAYLVNRSPSTAIDFKTPQEVWSGKPSNYSGLKIFGCPAYAHVSDGKLEPRAMKCI 995

Query: 138  FIGYVDGTKGYRIW-SLDPPQRFVISRDVTFNEKFM 34
            F+GY  G KGYR+W + D   +F+ISRDVTF+E  M
Sbjct: 996  FLGYATGVKGYRLWCTEDRTPKFIISRDVTFDESAM 1031


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  129 bits (323), Expect = 3e-28
 Identities = 59/96 (61%), Positives = 75/96 (78%)
 Frame = -1

Query: 318 AVNTACHLVNISPSTTIDCKTPHEVWSGKPADYSDLKVFGCPAYYHVRDRKIDPRAKKGV 139
           AV+TAC+L+N  P T I CKTP E+WSGK ADYS+LK FGC AYYHV + K++PRAKKGV
Sbjct: 602 AVSTACYLINRGPHTGIQCKTPMEMWSGKAADYSNLKAFGCTAYYHVSEGKLEPRAKKGV 661

Query: 138 FIGYVDGTKGYRIWSLDPPQRFVISRDVTFNEKFML 31
           F+GY DG KG+RIWS    +R ++SR+V F+E  +L
Sbjct: 662 FVGYGDGVKGFRIWS-PAEKRVIMSRNVVFDESPLL 696


>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
          Length = 1334

 Score =  120 bits (302), Expect = 9e-26
 Identities = 55/96 (57%), Positives = 72/96 (75%)
 Frame = -1

Query: 318 AVNTACHLVNISPSTTIDCKTPHEVWSGKPADYSDLKVFGCPAYYHVRDRKIDPRAKKGV 139
           AVNTA +LVN SPS+ I  KTP E+W+GKPA+Y +L+VFGCPAY H+   K++ RA KGV
Sbjct: 614 AVNTASYLVNRSPSSAIGFKTPEELWNGKPANYQNLRVFGCPAYLHINQGKLEARALKGV 673

Query: 138 FIGYVDGTKGYRIWSLDPPQRFVISRDVTFNEKFML 31
           F+GY DG KGY+IW  D   + ++SRDV F+E  +L
Sbjct: 674 FVGYPDGVKGYKIWCKD-QGKCIVSRDVVFHESVLL 708


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  119 bits (297), Expect = 3e-25
 Identities = 59/109 (54%), Positives = 80/109 (73%), Gaps = 3/109 (2%)
 Frame = -1

Query: 318  AVNTACHLVNISPSTTIDCKTPHEVWSGKPADYSDLKVFGCPAYYHVRDRKIDPRAKKGV 139
            AV+TAC+L+N SPS  ID KTP EVWSG PA+YSDL+VFGC AY HV + K++PRA K +
Sbjct: 831  AVSTACYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCI 890

Query: 138  FIGYVDGTKGYRIWSLDPPQRFVISRDVTFNEKFMLDHQ---NISVKSK 1
            F+GY  G KGY++W  +  ++ VISR+V F+E  ML  +   N+ V+S+
Sbjct: 891  FLGYPSGVKGYKLWCPE-TKKVVISRNVVFHESVMLHDKPSTNVPVESQ 938