BLASTX nr result

ID: Bupleurum21_contig00031252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031252
         (1004 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27547.3| unnamed protein product [Vitis vinifera]              400   e-109
ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3...   400   e-109
ref|XP_002315633.1| multidrug resistance protein ABC transporter...   393   e-107
ref|XP_002515003.1| multidrug resistance-associated protein 2, 6...   390   e-106
ref|XP_002312645.1| multidrug resistance protein ABC transporter...   377   e-102

>emb|CBI27547.3| unnamed protein product [Vitis vinifera]
          Length = 1363

 Score =  400 bits (1027), Expect = e-109
 Identities = 203/239 (84%), Positives = 223/239 (93%)
 Frame = -1

Query: 1004 NLHVQYTPSLPRVLKGITCTFQGQKKIGVVGRTGSGKSTLIQALFRVVEPTEGQILIDGV 825
            NLHV+YTP+LP VLKGITCTF G++KIGVVGRTGSGKSTLIQALFRVVEP+EGQILIDGV
Sbjct: 1121 NLHVRYTPTLPMVLKGITCTFPGERKIGVVGRTGSGKSTLIQALFRVVEPSEGQILIDGV 1180

Query: 824  NISSMGLQDLRSRLSIIPQDPTLFQGTMRSNLDLLQQHSDHEIWEVLNKCQLAEGVRQDQ 645
            +IS MGL+DLRSRLSIIPQDPTLFQGTMR+NLD L +HSD EIWEVLNKC+LAE + QD+
Sbjct: 1181 DISKMGLKDLRSRLSIIPQDPTLFQGTMRTNLDPLGEHSDQEIWEVLNKCRLAEIIGQDK 1240

Query: 644  RRLDAPVAEDGENWSVGQRQLVCLARVLLQKRRILVLDEATASVDTATDNVIQKTIRKET 465
              L+A VAEDGENWSVGQRQLVCLARVLLQ+R+ILVLDEATASVDTATDN+IQKTIR+ET
Sbjct: 1241 GLLNARVAEDGENWSVGQRQLVCLARVLLQRRKILVLDEATASVDTATDNLIQKTIREET 1300

Query: 464  SECTVITVAHRIPTVIDNDLVLVLDEGKILEYDSPAQLLTDSSSAFSNLVAEFMRRSSK 288
            S+CTVITVAHRIPTVIDNDLVLVLDEGK++EYDSP QLL DSSSAFS LV EF RRSSK
Sbjct: 1301 SKCTVITVAHRIPTVIDNDLVLVLDEGKVVEYDSPPQLLKDSSSAFSKLVMEFRRRSSK 1359


>ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1462

 Score =  400 bits (1027), Expect = e-109
 Identities = 203/239 (84%), Positives = 223/239 (93%)
 Frame = -1

Query: 1004 NLHVQYTPSLPRVLKGITCTFQGQKKIGVVGRTGSGKSTLIQALFRVVEPTEGQILIDGV 825
            NLHV+YTP+LP VLKGITCTF G++KIGVVGRTGSGKSTLIQALFRVVEP+EGQILIDGV
Sbjct: 1220 NLHVRYTPTLPMVLKGITCTFPGERKIGVVGRTGSGKSTLIQALFRVVEPSEGQILIDGV 1279

Query: 824  NISSMGLQDLRSRLSIIPQDPTLFQGTMRSNLDLLQQHSDHEIWEVLNKCQLAEGVRQDQ 645
            +IS MGL+DLRSRLSIIPQDPTLFQGTMR+NLD L +HSD EIWEVLNKC+LAE + QD+
Sbjct: 1280 DISKMGLKDLRSRLSIIPQDPTLFQGTMRTNLDPLGEHSDQEIWEVLNKCRLAEIIGQDK 1339

Query: 644  RRLDAPVAEDGENWSVGQRQLVCLARVLLQKRRILVLDEATASVDTATDNVIQKTIRKET 465
              L+A VAEDGENWSVGQRQLVCLARVLLQ+R+ILVLDEATASVDTATDN+IQKTIR+ET
Sbjct: 1340 GLLNARVAEDGENWSVGQRQLVCLARVLLQRRKILVLDEATASVDTATDNLIQKTIREET 1399

Query: 464  SECTVITVAHRIPTVIDNDLVLVLDEGKILEYDSPAQLLTDSSSAFSNLVAEFMRRSSK 288
            S+CTVITVAHRIPTVIDNDLVLVLDEGK++EYDSP QLL DSSSAFS LV EF RRSSK
Sbjct: 1400 SKCTVITVAHRIPTVIDNDLVLVLDEGKVVEYDSPPQLLKDSSSAFSKLVMEFRRRSSK 1458



 Score = 73.2 bits (178), Expect = 9e-11
 Identities = 59/200 (29%), Positives = 102/200 (51%), Gaps = 1/200 (0%)
 Frame = -1

Query: 929  KIGVVGRTGSGKSTLIQALFRVVEPTEGQILIDGVNISSMGLQDLRSRLSIIPQDPTLFQ 750
            K+ V G  GSGKS+L+ ++        G+I      IS  G +   S+ + +PQ   +  
Sbjct: 632  KVAVCGSVGSGKSSLLCSIL-------GEI----PRISGTGSKVYGSK-AYVPQSAWIQT 679

Query: 749  GTMRSNLDLLQQHSDHEIWEVLNKCQLAEGVRQDQRRLDAPVAEDGENWSVGQRQLVCLA 570
            GT+R N+   ++ +     +VL  C L   ++       + V E G N S GQ+Q + LA
Sbjct: 680  GTIRDNVLFGKEINKAFYEDVLEACALDRDIQLWYNGDLSVVGERGMNLSGGQKQRIQLA 739

Query: 569  RVLLQKRRILVLDEATASVDTATD-NVIQKTIRKETSECTVITVAHRIPTVIDNDLVLVL 393
            R +  +  +  LD+  ++VD  T  ++ QK + +  S+ TVI V H++  +  +DLVLV+
Sbjct: 740  RAIYSESDVYFLDDPFSAVDAHTGAHLFQKCLMQILSQKTVIYVTHQLEFLDASDLVLVM 799

Query: 392  DEGKILEYDSPAQLLTDSSS 333
             +G I++      L+ D +S
Sbjct: 800  KDGIIVQSGKYEDLIADPNS 819


>ref|XP_002315633.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222864673|gb|EEF01804.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1044

 Score =  393 bits (1009), Expect = e-107
 Identities = 195/237 (82%), Positives = 220/237 (92%)
 Frame = -1

Query: 1004 NLHVQYTPSLPRVLKGITCTFQGQKKIGVVGRTGSGKSTLIQALFRVVEPTEGQILIDGV 825
            +LHVQY PSLP VLKGITCTF G KKIGVVGRTGSGKSTLIQALFRV+EP+ GQILIDG+
Sbjct: 805  SLHVQYGPSLPMVLKGITCTFPGGKKIGVVGRTGSGKSTLIQALFRVIEPSGGQILIDGL 864

Query: 824  NISSMGLQDLRSRLSIIPQDPTLFQGTMRSNLDLLQQHSDHEIWEVLNKCQLAEGVRQDQ 645
            +IS +GLQDLRSRL IIPQDPTLFQGT+R+NLD L+QHSD EIWEVLNKC+LA+ V+QD+
Sbjct: 865  DISKIGLQDLRSRLGIIPQDPTLFQGTVRTNLDPLEQHSDQEIWEVLNKCRLADTVKQDK 924

Query: 644  RRLDAPVAEDGENWSVGQRQLVCLARVLLQKRRILVLDEATASVDTATDNVIQKTIRKET 465
            R LDAPVAEDGENWSVGQRQLVCLARV+L+KRRILVLDEATAS+DTATDN+IQ TIR+ET
Sbjct: 925  RLLDAPVAEDGENWSVGQRQLVCLARVMLKKRRILVLDEATASIDTATDNIIQGTIREET 984

Query: 464  SECTVITVAHRIPTVIDNDLVLVLDEGKILEYDSPAQLLTDSSSAFSNLVAEFMRRS 294
            S CTVITVAHRIPTVIDNDLVLVLD+GK++EYDSP +LL D+SS+FS LV EF+RRS
Sbjct: 985  STCTVITVAHRIPTVIDNDLVLVLDDGKVVEYDSPVKLLEDNSSSFSKLVTEFLRRS 1041



 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 59/197 (29%), Positives = 98/197 (49%), Gaps = 1/197 (0%)
 Frame = -1

Query: 929 KIGVVGRTGSGKSTLIQALFRVVEPTEGQILIDGVNISSMGLQDLRSRLSIIPQDPTLFQ 750
           K+ V G  GSGKS+L+ ++        G+I      IS  G++ +    + +PQ   +  
Sbjct: 249 KVAVCGSVGSGKSSLLCSII-------GEI----PRISGAGIK-VHGTKAYVPQRAWIQT 296

Query: 749 GTMRSNLDLLQQHSDHEIWE-VLNKCQLAEGVRQDQRRLDAPVAEDGENWSVGQRQLVCL 573
            T+R N+ L  +  + + +E VL  C L + + Q        V E G N S GQ+Q + L
Sbjct: 297 RTVRDNV-LFGKDMNRDFYEDVLKGCALKQDIEQWADGDLTVVGERGVNLSGGQKQRIQL 355

Query: 572 ARVLLQKRRILVLDEATASVDTATDNVIQKTIRKETSECTVITVAHRIPTVIDNDLVLVL 393
           AR L     + +LD+  ++VD  T   + K + +  S+ TVI   H++  + D DLVLV+
Sbjct: 356 ARALYSNSDVYILDDPFSAVDAHTGTHLNKCLMQLLSQKTVIYATHQLEFLEDADLVLVM 415

Query: 392 DEGKILEYDSPAQLLTD 342
            +G I++      L+ D
Sbjct: 416 KDGMIVQSGKYEDLIAD 432


>ref|XP_002515003.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
            gi|223546054|gb|EEF47557.1| multidrug
            resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
          Length = 1464

 Score =  390 bits (1002), Expect = e-106
 Identities = 197/239 (82%), Positives = 217/239 (90%)
 Frame = -1

Query: 1004 NLHVQYTPSLPRVLKGITCTFQGQKKIGVVGRTGSGKSTLIQALFRVVEPTEGQILIDGV 825
            NL VQY+PSLP VLK ITC F G KKIGVVGRTGSGKSTLIQALFRV+EP+EGQILIDG 
Sbjct: 1221 NLCVQYSPSLPMVLKSITCIFPGGKKIGVVGRTGSGKSTLIQALFRVIEPSEGQILIDGQ 1280

Query: 824  NISSMGLQDLRSRLSIIPQDPTLFQGTMRSNLDLLQQHSDHEIWEVLNKCQLAEGVRQDQ 645
            +IS +GL+DLRS L IIPQDPTLFQGT+R+NLD LQ+HSDHEIWEVL KC+LA+ VRQD 
Sbjct: 1281 DISKIGLRDLRSGLGIIPQDPTLFQGTVRTNLDPLQEHSDHEIWEVLKKCRLADIVRQDS 1340

Query: 644  RRLDAPVAEDGENWSVGQRQLVCLARVLLQKRRILVLDEATASVDTATDNVIQKTIRKET 465
            R L+APVAEDGENWSVGQRQLVCLARVLL+KRRILVLDEATAS+DTATDN+IQ  IR+ET
Sbjct: 1341 RLLEAPVAEDGENWSVGQRQLVCLARVLLKKRRILVLDEATASIDTATDNIIQGAIREET 1400

Query: 464  SECTVITVAHRIPTVIDNDLVLVLDEGKILEYDSPAQLLTDSSSAFSNLVAEFMRRSSK 288
            S CTVITVAHRIPTVIDNDLVLVLDEGK++EYD P QLL DSSS+FS LVAEF+RRSSK
Sbjct: 1401 SRCTVITVAHRIPTVIDNDLVLVLDEGKVIEYDCPGQLLKDSSSSFSKLVAEFLRRSSK 1459



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 57/201 (28%), Positives = 101/201 (50%), Gaps = 2/201 (0%)
 Frame = -1

Query: 929  KIGVVGRTGSGKSTLIQALFRVVEPTEGQILIDGVNISSMGLQDLRSRLSIIPQDPTLFQ 750
            K+ V G  GSGKS+L+ ++        G+I      IS  G++ +  + + +PQ   +  
Sbjct: 632  KVAVCGSVGSGKSSLLCSIL-------GEI----PRISGAGIK-VYGKKAYVPQSAWIQT 679

Query: 749  GTMRSNLDLLQQHSDHEIWE-VLNKCQLAEGVRQDQRRLDAPVAEDGENWSVGQRQLVCL 573
            G ++ N+ L  +  D   +E V+  C L + +R         + E G N S GQ+Q + L
Sbjct: 680  GIVKENV-LFGKDMDKAFYEDVMEGCALNQDIRIWTHGDLTVIGERGINLSGGQKQRIQL 738

Query: 572  ARVLLQKRRILVLDEATASVDTAT-DNVIQKTIRKETSECTVITVAHRIPTVIDNDLVLV 396
            AR +     + +LD+  ++VD  T  ++ +K + +  S+ TVI   H++  V   DLVLV
Sbjct: 739  ARAVYSNSDVYILDDPFSAVDAHTGTHLFKKCLAQLLSQKTVIYATHQLEFVDAADLVLV 798

Query: 395  LDEGKILEYDSPAQLLTDSSS 333
            + +G I++      L+ D +S
Sbjct: 799  MKDGIIVQSGKYEDLIADPTS 819


>ref|XP_002312645.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222852465|gb|EEE90012.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1361

 Score =  377 bits (967), Expect = e-102
 Identities = 185/236 (78%), Positives = 218/236 (92%)
 Frame = -1

Query: 1001 LHVQYTPSLPRVLKGITCTFQGQKKIGVVGRTGSGKSTLIQALFRVVEPTEGQILIDGVN 822
            L VQY+PSLP+VLKGITCTF G KKIGVVGRTGSGKSTLIQALFRV+EP+ GQILIDG++
Sbjct: 1126 LDVQYSPSLPKVLKGITCTFPGGKKIGVVGRTGSGKSTLIQALFRVIEPSGGQILIDGLD 1185

Query: 821  ISSMGLQDLRSRLSIIPQDPTLFQGTMRSNLDLLQQHSDHEIWEVLNKCQLAEGVRQDQR 642
            IS +GL+DLRS+L IIPQDPTLF+GT+R+NLD L++HSD EIWEVLNKC+LA+ V++D+R
Sbjct: 1186 ISKIGLRDLRSKLGIIPQDPTLFRGTVRTNLDPLEKHSDQEIWEVLNKCRLADIVKRDKR 1245

Query: 641  RLDAPVAEDGENWSVGQRQLVCLARVLLQKRRILVLDEATASVDTATDNVIQKTIRKETS 462
             LDAPV+EDGENWSVGQRQLVCLARVLL+KRRILVLDEATAS+D  TDN+IQ TIR+ETS
Sbjct: 1246 LLDAPVSEDGENWSVGQRQLVCLARVLLKKRRILVLDEATASIDIETDNIIQGTIREETS 1305

Query: 461  ECTVITVAHRIPTVIDNDLVLVLDEGKILEYDSPAQLLTDSSSAFSNLVAEFMRRS 294
             CTVITVAHRIPTVIDNDL+LVL++GK++EYDSP +LL D+SS+FS LV EF+RRS
Sbjct: 1306 RCTVITVAHRIPTVIDNDLILVLEDGKVVEYDSPVKLLKDNSSSFSKLVIEFLRRS 1361



 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 61/239 (25%), Positives = 100/239 (41%), Gaps = 29/239 (12%)
 Frame = -1

Query: 929  KIGVVGRTGSGKSTLIQALFRVVEPTEGQI-LIDGVNISSMGLQDLRSRLSIIPQDPTLF 753
            K+ V G  GSGKS+L+ ++        G+I +I G  +   G +      + +PQ   + 
Sbjct: 510  KVAVCGSVGSGKSSLLCSIL-------GEIPMISGAGVKVHGTK------AYVPQSAWIQ 556

Query: 752  QGTMRSNLDLLQQHSDHEIWE-VLNKCQLAEGVRQDQRRLDAPVAEDGENWSVGQRQLVC 576
             GT+R N+ L  +    EI+E VL  C L + +          V E G N S GQ+Q + 
Sbjct: 557  TGTVRDNV-LFGKDMSKEIYEDVLEGCALNQDIEIWADGDLTVVGERGMNLSGGQKQRIQ 615

Query: 575  LARVLLQKRRILVLDEATASVDTATDNVI---------------------------QKTI 477
            LAR +     + +LD+  ++VD  T   +                            K +
Sbjct: 616  LARAVYSNSDVYILDDPFSAVDAHTGTHLFKARIFLIFFCFLFISRATLLPCRYSHLKCL 675

Query: 476  RKETSECTVITVAHRIPTVIDNDLVLVLDEGKILEYDSPAQLLTDSSSAFSNLVAEFMR 300
             +  S+ TVI   H++  +   DLVLV  +G I++      L+ D +      +A   R
Sbjct: 676  MQLLSQKTVIYATHQLEFLDAADLVLVTKDGVIVQSGKYEDLIADPTGELVRQMAAHRR 734


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