BLASTX nr result

ID: Bupleurum21_contig00030771 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030771
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533281.1| pentatricopeptide repeat-containing protein,...   177   1e-42
ref|XP_002327713.1| predicted protein [Populus trichocarpa] gi|2...   168   4e-40
emb|CBI17585.3| unnamed protein product [Vitis vinifera]              164   5e-39
ref|XP_002269506.1| PREDICTED: pentatricopeptide repeat-containi...   164   5e-39
ref|XP_003538834.1| PREDICTED: pentatricopeptide repeat-containi...   157   8e-37

>ref|XP_002533281.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526906|gb|EEF29113.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 652

 Score =  177 bits (448), Expect = 1e-42
 Identities = 81/107 (75%), Positives = 97/107 (90%)
 Frame = -1

Query: 325 ALDILDEMILCGILPDIQTYSGLMNHFALEGDIKTVQRLFGMVKQTGIEPDAYMFKILIF 146
           A+D+L+EMILCGI PDIQTYSGLM HFAL+GDIKT Q+LF +V+Q+G+EPDAYMFK+LI 
Sbjct: 501 AIDVLEEMILCGISPDIQTYSGLMYHFALQGDIKTAQKLFTIVRQSGVEPDAYMFKVLIL 560

Query: 145 AYCKSERSALALRVFEDMRNSNMLPDATTKDFLVKSLWKEGKLREAA 5
           AYCK ER+ALA RVFEDM+NSN++PD  TKDFL+KSLWKEGK +EAA
Sbjct: 561 AYCKCERAALAWRVFEDMKNSNLMPDTATKDFLIKSLWKEGKRKEAA 607


>ref|XP_002327713.1| predicted protein [Populus trichocarpa] gi|222836798|gb|EEE75191.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  168 bits (426), Expect = 4e-40
 Identities = 77/108 (71%), Positives = 97/108 (89%)
 Frame = -1

Query: 325 ALDILDEMILCGILPDIQTYSGLMNHFALEGDIKTVQRLFGMVKQTGIEPDAYMFKILIF 146
           A+D+L+EMILCGI PDIQT+SGLM HFA +GDIKTVQ+L  +V+Q+ +EPDAYM+K+LI 
Sbjct: 365 AIDVLEEMILCGICPDIQTFSGLMYHFASQGDIKTVQKLLTIVRQSDVEPDAYMYKVLIQ 424

Query: 145 AYCKSERSALALRVFEDMRNSNMLPDATTKDFLVKSLWKEGKLREAAS 2
           AYCK +R+ALA R+FEDM+NSN++PDA TKD LVKSLWKEGKL+EAA+
Sbjct: 425 AYCKCDRAALAWRIFEDMKNSNLIPDAATKDLLVKSLWKEGKLKEAAT 472


>emb|CBI17585.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score =  164 bits (416), Expect = 5e-39
 Identities = 78/108 (72%), Positives = 93/108 (86%)
 Frame = -1

Query: 325 ALDILDEMILCGILPDIQTYSGLMNHFALEGDIKTVQRLFGMVKQTGIEPDAYMFKILIF 146
           ALD+L++M L GI PD+ T+SGLM HFALEGD KTVQ+LF MV+Q+G+EPDAYMFK+LI 
Sbjct: 474 ALDVLEQMFLGGICPDVPTFSGLMYHFALEGDFKTVQKLFMMVRQSGVEPDAYMFKVLIH 533

Query: 145 AYCKSERSALALRVFEDMRNSNMLPDATTKDFLVKSLWKEGKLREAAS 2
            YCK ERSALALRVFEDMR+ N++PDA TK+ LVK LWKEG+ REAAS
Sbjct: 534 GYCKCERSALALRVFEDMRSLNLMPDAATKNLLVKCLWKEGRRREAAS 581


>ref|XP_002269506.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66631-like [Vitis vinifera]
          Length = 660

 Score =  164 bits (416), Expect = 5e-39
 Identities = 78/108 (72%), Positives = 93/108 (86%)
 Frame = -1

Query: 325 ALDILDEMILCGILPDIQTYSGLMNHFALEGDIKTVQRLFGMVKQTGIEPDAYMFKILIF 146
           ALD+L++M L GI PD+ T+SGLM HFALEGD KTVQ+LF MV+Q+G+EPDAYMFK+LI 
Sbjct: 498 ALDVLEQMFLGGICPDVPTFSGLMYHFALEGDFKTVQKLFMMVRQSGVEPDAYMFKVLIH 557

Query: 145 AYCKSERSALALRVFEDMRNSNMLPDATTKDFLVKSLWKEGKLREAAS 2
            YCK ERSALALRVFEDMR+ N++PDA TK+ LVK LWKEG+ REAAS
Sbjct: 558 GYCKCERSALALRVFEDMRSLNLMPDAATKNLLVKCLWKEGRRREAAS 605


>ref|XP_003538834.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66631-like [Glycine max]
          Length = 658

 Score =  157 bits (397), Expect = 8e-37
 Identities = 75/108 (69%), Positives = 94/108 (87%)
 Frame = -1

Query: 325 ALDILDEMILCGILPDIQTYSGLMNHFALEGDIKTVQRLFGMVKQTGIEPDAYMFKILIF 146
           ALD+LD+MIL GI PDIQT+SGLM +F+  GDIKTVQ+LF MV+Q+G+EPDAY+FK LI 
Sbjct: 511 ALDMLDDMILNGICPDIQTFSGLMYYFSQLGDIKTVQKLFAMVRQSGLEPDAYLFKALIQ 570

Query: 145 AYCKSERSALALRVFEDMRNSNMLPDATTKDFLVKSLWKEGKLREAAS 2
            YCKSER+ALA R+FEDM+NS ++PD+ TK+ LVKSLWKEG+ REAA+
Sbjct: 571 GYCKSERAALAWRLFEDMKNSGLVPDSATKELLVKSLWKEGRRREAAA 618


Top