BLASTX nr result
ID: Bupleurum21_contig00030771
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00030771 (331 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002533281.1| pentatricopeptide repeat-containing protein,... 177 1e-42 ref|XP_002327713.1| predicted protein [Populus trichocarpa] gi|2... 168 4e-40 emb|CBI17585.3| unnamed protein product [Vitis vinifera] 164 5e-39 ref|XP_002269506.1| PREDICTED: pentatricopeptide repeat-containi... 164 5e-39 ref|XP_003538834.1| PREDICTED: pentatricopeptide repeat-containi... 157 8e-37 >ref|XP_002533281.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223526906|gb|EEF29113.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 652 Score = 177 bits (448), Expect = 1e-42 Identities = 81/107 (75%), Positives = 97/107 (90%) Frame = -1 Query: 325 ALDILDEMILCGILPDIQTYSGLMNHFALEGDIKTVQRLFGMVKQTGIEPDAYMFKILIF 146 A+D+L+EMILCGI PDIQTYSGLM HFAL+GDIKT Q+LF +V+Q+G+EPDAYMFK+LI Sbjct: 501 AIDVLEEMILCGISPDIQTYSGLMYHFALQGDIKTAQKLFTIVRQSGVEPDAYMFKVLIL 560 Query: 145 AYCKSERSALALRVFEDMRNSNMLPDATTKDFLVKSLWKEGKLREAA 5 AYCK ER+ALA RVFEDM+NSN++PD TKDFL+KSLWKEGK +EAA Sbjct: 561 AYCKCERAALAWRVFEDMKNSNLMPDTATKDFLIKSLWKEGKRKEAA 607 >ref|XP_002327713.1| predicted protein [Populus trichocarpa] gi|222836798|gb|EEE75191.1| predicted protein [Populus trichocarpa] Length = 517 Score = 168 bits (426), Expect = 4e-40 Identities = 77/108 (71%), Positives = 97/108 (89%) Frame = -1 Query: 325 ALDILDEMILCGILPDIQTYSGLMNHFALEGDIKTVQRLFGMVKQTGIEPDAYMFKILIF 146 A+D+L+EMILCGI PDIQT+SGLM HFA +GDIKTVQ+L +V+Q+ +EPDAYM+K+LI Sbjct: 365 AIDVLEEMILCGICPDIQTFSGLMYHFASQGDIKTVQKLLTIVRQSDVEPDAYMYKVLIQ 424 Query: 145 AYCKSERSALALRVFEDMRNSNMLPDATTKDFLVKSLWKEGKLREAAS 2 AYCK +R+ALA R+FEDM+NSN++PDA TKD LVKSLWKEGKL+EAA+ Sbjct: 425 AYCKCDRAALAWRIFEDMKNSNLIPDAATKDLLVKSLWKEGKLKEAAT 472 >emb|CBI17585.3| unnamed protein product [Vitis vinifera] Length = 636 Score = 164 bits (416), Expect = 5e-39 Identities = 78/108 (72%), Positives = 93/108 (86%) Frame = -1 Query: 325 ALDILDEMILCGILPDIQTYSGLMNHFALEGDIKTVQRLFGMVKQTGIEPDAYMFKILIF 146 ALD+L++M L GI PD+ T+SGLM HFALEGD KTVQ+LF MV+Q+G+EPDAYMFK+LI Sbjct: 474 ALDVLEQMFLGGICPDVPTFSGLMYHFALEGDFKTVQKLFMMVRQSGVEPDAYMFKVLIH 533 Query: 145 AYCKSERSALALRVFEDMRNSNMLPDATTKDFLVKSLWKEGKLREAAS 2 YCK ERSALALRVFEDMR+ N++PDA TK+ LVK LWKEG+ REAAS Sbjct: 534 GYCKCERSALALRVFEDMRSLNLMPDAATKNLLVKCLWKEGRRREAAS 581 >ref|XP_002269506.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66631-like [Vitis vinifera] Length = 660 Score = 164 bits (416), Expect = 5e-39 Identities = 78/108 (72%), Positives = 93/108 (86%) Frame = -1 Query: 325 ALDILDEMILCGILPDIQTYSGLMNHFALEGDIKTVQRLFGMVKQTGIEPDAYMFKILIF 146 ALD+L++M L GI PD+ T+SGLM HFALEGD KTVQ+LF MV+Q+G+EPDAYMFK+LI Sbjct: 498 ALDVLEQMFLGGICPDVPTFSGLMYHFALEGDFKTVQKLFMMVRQSGVEPDAYMFKVLIH 557 Query: 145 AYCKSERSALALRVFEDMRNSNMLPDATTKDFLVKSLWKEGKLREAAS 2 YCK ERSALALRVFEDMR+ N++PDA TK+ LVK LWKEG+ REAAS Sbjct: 558 GYCKCERSALALRVFEDMRSLNLMPDAATKNLLVKCLWKEGRRREAAS 605 >ref|XP_003538834.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66631-like [Glycine max] Length = 658 Score = 157 bits (397), Expect = 8e-37 Identities = 75/108 (69%), Positives = 94/108 (87%) Frame = -1 Query: 325 ALDILDEMILCGILPDIQTYSGLMNHFALEGDIKTVQRLFGMVKQTGIEPDAYMFKILIF 146 ALD+LD+MIL GI PDIQT+SGLM +F+ GDIKTVQ+LF MV+Q+G+EPDAY+FK LI Sbjct: 511 ALDMLDDMILNGICPDIQTFSGLMYYFSQLGDIKTVQKLFAMVRQSGLEPDAYLFKALIQ 570 Query: 145 AYCKSERSALALRVFEDMRNSNMLPDATTKDFLVKSLWKEGKLREAAS 2 YCKSER+ALA R+FEDM+NS ++PD+ TK+ LVKSLWKEG+ REAA+ Sbjct: 571 GYCKSERAALAWRLFEDMKNSGLVPDSATKELLVKSLWKEGRRREAAA 618