BLASTX nr result

ID: Bupleurum21_contig00030587 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030587
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282312.1| PREDICTED: rop guanine nucleotide exchange f...    96   6e-39
ref|XP_002312931.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-35
ref|XP_002306208.1| predicted protein [Populus trichocarpa] gi|2...    91   5e-35
ref|XP_004139953.1| PREDICTED: rop guanine nucleotide exchange f...    89   8e-35
gb|AAL07042.1| unknown protein [Arabidopsis thaliana]                  86   2e-34

>ref|XP_002282312.1| PREDICTED: rop guanine nucleotide exchange factor 1 [Vitis
           vinifera] gi|297744497|emb|CBI37759.3| unnamed protein
           product [Vitis vinifera]
          Length = 587

 Score = 95.5 bits (236), Expect(2) = 6e-39
 Identities = 49/68 (72%), Positives = 53/68 (77%), Gaps = 2/68 (2%)
 Frame = -1

Query: 402 SSPLARRVFAGISGFPA--PVMFPVVGGKDVVVWEEKDDKPEADLSEVEMMKERFAKLLL 229
           SSPLA R   G S FP   P+M PV+GG+DVVVW EK +K E DLSE EMMKERFAKLLL
Sbjct: 51  SSPLACRPVVGNSSFPVGPPLMLPVIGGRDVVVWGEKPEKRETDLSEAEMMKERFAKLLL 110

Query: 228 GEDMSGGG 205
           GEDMSGGG
Sbjct: 111 GEDMSGGG 118



 Score = 90.5 bits (223), Expect(2) = 6e-39
 Identities = 41/44 (93%), Positives = 43/44 (97%)
 Frame = -3

Query: 133 CTALAISNAITNLSATVFGELWRLKPLAPQKKTMWCREMEYLLC 2
           CTALAISNAITNLSATVFGELWRL+PLAPQKK MWCREME+LLC
Sbjct: 122 CTALAISNAITNLSATVFGELWRLEPLAPQKKAMWCREMEWLLC 165


>ref|XP_002312931.1| predicted protein [Populus trichocarpa] gi|222849339|gb|EEE86886.1|
           predicted protein [Populus trichocarpa]
          Length = 577

 Score = 90.1 bits (222), Expect(2) = 2e-35
 Identities = 50/67 (74%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
 Frame = -1

Query: 402 SSPLARRVFAGISGFPAPVMFPVVGGKDVVVWEEKDDKP-EADLSEVEMMKERFAKLLLG 226
           SSP   R  AG   FPAPVM PV+GGKDVVVW  K++K  E DLSEVEMMKERFAKLLLG
Sbjct: 56  SSP---RPVAGGFCFPAPVMVPVIGGKDVVVWGSKNEKRRETDLSEVEMMKERFAKLLLG 112

Query: 225 EDMSGGG 205
           EDMSGGG
Sbjct: 113 EDMSGGG 119



 Score = 84.3 bits (207), Expect(2) = 2e-35
 Identities = 39/44 (88%), Positives = 42/44 (95%)
 Frame = -3

Query: 133 CTALAISNAITNLSATVFGELWRLKPLAPQKKTMWCREMEYLLC 2
           CTALAISNAITNLSATVFGELWRL+PL PQKK+MW REME+LLC
Sbjct: 123 CTALAISNAITNLSATVFGELWRLEPLLPQKKSMWKREMEWLLC 166


>ref|XP_002306208.1| predicted protein [Populus trichocarpa] gi|222849172|gb|EEE86719.1|
           predicted protein [Populus trichocarpa]
          Length = 576

 Score = 90.5 bits (223), Expect(2) = 5e-35
 Identities = 44/53 (83%), Positives = 49/53 (92%), Gaps = 1/53 (1%)
 Frame = -1

Query: 360 FPAPVMFPVVGGKDVVVWEEKDDKP-EADLSEVEMMKERFAKLLLGEDMSGGG 205
           FPAPVM PV+GGKDVVVW+ K++K  +ADLSEVEMMKERFAKLLLGEDMSGGG
Sbjct: 67  FPAPVMVPVIGGKDVVVWDSKNEKRGDADLSEVEMMKERFAKLLLGEDMSGGG 119



 Score = 82.4 bits (202), Expect(2) = 5e-35
 Identities = 39/44 (88%), Positives = 42/44 (95%)
 Frame = -3

Query: 133 CTALAISNAITNLSATVFGELWRLKPLAPQKKTMWCREMEYLLC 2
           CTALAISNAITNLSATVFGELWRL+PLA QKK+MW REME+LLC
Sbjct: 123 CTALAISNAITNLSATVFGELWRLEPLALQKKSMWKREMEWLLC 166


>ref|XP_004139953.1| PREDICTED: rop guanine nucleotide exchange factor 1-like [Cucumis
           sativus] gi|449475751|ref|XP_004154542.1| PREDICTED: rop
           guanine nucleotide exchange factor 1-like [Cucumis
           sativus]
          Length = 570

 Score = 89.0 bits (219), Expect(2) = 8e-35
 Identities = 42/52 (80%), Positives = 45/52 (86%)
 Frame = -1

Query: 360 FPAPVMFPVVGGKDVVVWEEKDDKPEADLSEVEMMKERFAKLLLGEDMSGGG 205
           FP PV  PV+GGKDV VW++K  K EADLSEVEMMKERFAKLLLGEDMSGGG
Sbjct: 62  FPPPVSLPVLGGKDVFVWDDKSKKREADLSEVEMMKERFAKLLLGEDMSGGG 113



 Score = 83.2 bits (204), Expect(2) = 8e-35
 Identities = 38/44 (86%), Positives = 42/44 (95%)
 Frame = -3

Query: 133 CTALAISNAITNLSATVFGELWRLKPLAPQKKTMWCREMEYLLC 2
           CTALAISNAITNLSA+VFGELWRL+PLAPQK+ MW REME+LLC
Sbjct: 117 CTALAISNAITNLSASVFGELWRLEPLAPQKRAMWHREMEWLLC 160


>gb|AAL07042.1| unknown protein [Arabidopsis thaliana]
          Length = 548

 Score = 85.9 bits (211), Expect(2) = 2e-34
 Identities = 47/68 (69%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
 Frame = -1

Query: 405 ASSPLARRVFAGISG-FPAPVMFPVVGGKDVVVWEEKDDKPEADLSEVEMMKERFAKLLL 229
           +S P + RV AG    FPAPVM PV+GGKDVV W++K  +P+ DLSE+EMMKERFAKLLL
Sbjct: 47  SSIPSSPRVVAGRGFYFPAPVMLPVIGGKDVV-WDDK--QPDNDLSEIEMMKERFAKLLL 103

Query: 228 GEDMSGGG 205
           GEDMSGGG
Sbjct: 104 GEDMSGGG 111



 Score = 84.7 bits (208), Expect(2) = 2e-34
 Identities = 39/44 (88%), Positives = 42/44 (95%)
 Frame = -3

Query: 133 CTALAISNAITNLSATVFGELWRLKPLAPQKKTMWCREMEYLLC 2
           CTALAISNAITNLSATVFGELWRL+PLAPQKK MW RE+E+LLC
Sbjct: 115 CTALAISNAITNLSATVFGELWRLEPLAPQKKAMWRRELEWLLC 158


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