BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030041
         (1019 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG00554.1|AF286475_1 retinitis pigmentosa GTPase regulator-l...    57   7e-06

>gb|AAG00554.1|AF286475_1 retinitis pigmentosa GTPase regulator-like protein, partial [Takifugu
            rubripes]
          Length = 791

 Score = 57.0 bits (136), Expect = 7e-06
 Identities = 62/262 (23%), Positives = 103/262 (39%), Gaps = 3/262 (1%)
 Frame = +3

Query: 237  ESQMSDRNEAKGEAAREGNRDAEENTSSEKKIPN--ESETQEDKENSPSGERMMKNEGKE 410
            ESQ    +E +GE+  EG  + EE    E++  +  ESE++++K+       + + EG+ 
Sbjct: 363  ESQSDVEDEEEGESRSEGQEEEEEEEEEEEERSSTAESESEDEKKGERKERDVEEEEGES 422

Query: 411  VVDKGRNNTEATGENQNGSGFNMTESATFAKNDSA-ILPEGEQNNSSSLLERKDNFNQTT 587
             V++    ++   E +  S     ES    + + A  L E E+ +S S  E  D  ++T 
Sbjct: 423  EVEESEEGSDHESERKKAS-----ESEEEGEEEEADSLSEEEEGDSKSDAEESDAESETE 477

Query: 588  EATQSDEQLTLKGQSADAPGRXXXXXXXXXXXXXXXXXXXXIIPSEDSTHSILEKKGKTE 767
                 +EQ      S +  G                         E+S     E++  TE
Sbjct: 478  GEGAEEEQ-----SSTEKEGESNEEEQSSTEKEESNEEEQSSTEKEESNE---EEQSSTE 529

Query: 768  QMSYGESTGSDLSPTTTENQNSVNGVSTESLNNSESVVVHGQRANFSASNKREDEYQHST 947
            +   GES   + S T  E  N     STE     ES            SN+ E+E + S 
Sbjct: 530  K--EGESNEEEQSSTEKEESNEEEQSSTE--KEEESNEEEQSSTEKEESNEEEEEEEESE 585

Query: 948  SNKHIDTVPNQKYDTRKTLPQE 1013
            SN+      +QK +  +   +E
Sbjct: 586  SNEEESEEEDQKDEEEEETGEE 607