BLASTX nr result

ID: Bupleurum21_contig00029749 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029749
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ93783.1| predicted protein [Hordeum vulgare subsp. vulgare]    114   1e-23
emb|CBI26708.3| unnamed protein product [Vitis vinifera]              114   1e-23
ref|XP_002276969.1| PREDICTED: transcription initiation factor T...   114   1e-23
ref|XP_002264290.1| PREDICTED: transcription initiation factor T...   114   1e-23
ref|NP_001043168.1| Os01g0510800 [Oryza sativa Japonica Group] g...   114   1e-23

>dbj|BAJ93783.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 547

 Score =  114 bits (284), Expect = 1e-23
 Identities = 61/98 (62%), Positives = 75/98 (76%), Gaps = 1/98 (1%)
 Frame = +2

Query: 122 IVGKESIQVIAQKIGFNNPSSLDEDDDDIFPSLAADVEYRLREIIQEAIKCMRHSKRTIL 301
           IV KE+I+VIAQ IG  +  +      D+  +LA DVEYRLREI+QEAIKCMRH+KRT+L
Sbjct: 3   IVPKETIEVIAQSIGIPSLPA------DVSAALAPDVEYRLREIMQEAIKCMRHAKRTVL 56

Query: 302 TSDDVDKALHLRNLEPIYGFASGD-TKFKKATTDKGLF 412
           T+DDVD AL LRN+EP+YGFASGD  +FK+A   K LF
Sbjct: 57  TADDVDSALSLRNVEPVYGFASGDHLRFKRAVGHKDLF 94


>emb|CBI26708.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score =  114 bits (284), Expect = 1e-23
 Identities = 62/98 (63%), Positives = 74/98 (75%), Gaps = 1/98 (1%)
 Frame = +2

Query: 122 IVGKESIQVIAQKIGFNNPSSLDEDDDDIFPSLAADVEYRLREIIQEAIKCMRHSKRTIL 301
           IV KE+I+VIAQ IG +N S       D+ P+LA DVEYR+REI+QEAIKCMRHSKRTIL
Sbjct: 3   IVPKETIEVIAQSIGISNFSP------DVAPALATDVEYRVREIMQEAIKCMRHSKRTIL 56

Query: 302 TSDDVDKALHLRNLEPIYGFASGDTK-FKKATTDKGLF 412
           T +DVD AL LRN+EP+YGF SG  + FK+A   K LF
Sbjct: 57  TVNDVDSALKLRNVEPLYGFTSGGPRQFKRAAGHKDLF 94


>ref|XP_002276969.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
           [Vitis vinifera]
          Length = 543

 Score =  114 bits (284), Expect = 1e-23
 Identities = 62/98 (63%), Positives = 74/98 (75%), Gaps = 1/98 (1%)
 Frame = +2

Query: 122 IVGKESIQVIAQKIGFNNPSSLDEDDDDIFPSLAADVEYRLREIIQEAIKCMRHSKRTIL 301
           IV KE+I+VIAQ IG +N S       D+ P+LA DVEYR+REI+QEAIKCMRHSKRTIL
Sbjct: 3   IVPKETIEVIAQSIGISNFSP------DVAPALATDVEYRVREIMQEAIKCMRHSKRTIL 56

Query: 302 TSDDVDKALHLRNLEPIYGFASGDTK-FKKATTDKGLF 412
           T +DVD AL LRN+EP+YGF SG  + FK+A   K LF
Sbjct: 57  TVNDVDSALKLRNVEPLYGFTSGGPRQFKRAAGHKDLF 94


>ref|XP_002264290.1| PREDICTED: transcription initiation factor TFIID subunit 6 [Vitis
           vinifera] gi|297739126|emb|CBI28777.3| unnamed protein
           product [Vitis vinifera]
          Length = 543

 Score =  114 bits (284), Expect = 1e-23
 Identities = 61/98 (62%), Positives = 75/98 (76%), Gaps = 1/98 (1%)
 Frame = +2

Query: 122 IVGKESIQVIAQKIGFNNPSSLDEDDDDIFPSLAADVEYRLREIIQEAIKCMRHSKRTIL 301
           IV KE+I+VIAQ IG  N S+      D+  +LA DVEYR+RE++QEAIKCMRHSKRT+L
Sbjct: 3   IVSKETIEVIAQSIGIANLSA------DVALALAPDVEYRMREVMQEAIKCMRHSKRTVL 56

Query: 302 TSDDVDKALHLRNLEPIYGFAS-GDTKFKKATTDKGLF 412
           T+DDVD AL+LRN+EPIYGF S G  +FK+A   K LF
Sbjct: 57  TTDDVDIALNLRNVEPIYGFTSGGPLRFKRAVGHKNLF 94


>ref|NP_001043168.1| Os01g0510800 [Oryza sativa Japonica Group]
           gi|20804496|dbj|BAB92191.1| putative TAF6 [Oryza sativa
           Japonica Group] gi|113532699|dbj|BAF05082.1|
           Os01g0510800 [Oryza sativa Japonica Group]
           gi|215768003|dbj|BAH00232.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222618539|gb|EEE54671.1| hypothetical protein
           OsJ_01969 [Oryza sativa Japonica Group]
          Length = 541

 Score =  114 bits (284), Expect = 1e-23
 Identities = 60/98 (61%), Positives = 74/98 (75%), Gaps = 1/98 (1%)
 Frame = +2

Query: 122 IVGKESIQVIAQKIGFNNPSSLDEDDDDIFPSLAADVEYRLREIIQEAIKCMRHSKRTIL 301
           IV KE+I+VI Q +G  N  +      D+  +LA DVEYRLREI+QEAIKCMRH+KRT+L
Sbjct: 3   IVPKETIEVIGQSVGIANLPA------DVSAALAPDVEYRLREIMQEAIKCMRHAKRTVL 56

Query: 302 TSDDVDKALHLRNLEPIYGFASGD-TKFKKATTDKGLF 412
           T+DDVD AL LRN+EP+YGFASGD  +FK+A   K LF
Sbjct: 57  TADDVDSALSLRNVEPVYGFASGDPLRFKRAVGHKDLF 94


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