BLASTX nr result

ID: Bupleurum21_contig00029709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029709
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314205.1| predicted protein [Populus trichocarpa] gi|2...    96   3e-18
ref|XP_002281895.2| PREDICTED: uncharacterized protein LOC100267...    88   8e-16
emb|CBI16241.3| unnamed protein product [Vitis vinifera]               88   8e-16
ref|XP_003597140.1| CCR4-NOT transcription complex subunit [Medi...    80   2e-13
ref|XP_003539741.1| PREDICTED: uncharacterized protein LOC100801...    78   9e-13

>ref|XP_002314205.1| predicted protein [Populus trichocarpa] gi|222850613|gb|EEE88160.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 50/105 (47%), Positives = 71/105 (67%)
 Frame = -3

Query: 317 SFLRNANQSPSTMHIDSTDADIEFIDPAILAVGKGRLAAGLDNSGFDMRSTYPTHMNNYE 138
           SFLRN+ QSP T +  S   +IEF+DPAILAVGKGRL  GL+N G DMRS +P  +++++
Sbjct: 196 SFLRNSFQSPPTGNAGSA-GEIEFMDPAILAVGKGRLQGGLNNLGVDMRSNFPQQLHHFD 254

Query: 137 SEARXXXXXXXXXXXXQNPKYVEMGGNFSSRPDNYGMPSRILEQS 3
           +EAR            QN +Y + G +FSS  D++G+ SR+++QS
Sbjct: 255 NEARLQLLMQRSLPPHQNTRYADTGDSFSSLNDSFGISSRLVDQS 299


>ref|XP_002281895.2| PREDICTED: uncharacterized protein LOC100267264 [Vitis vinifera]
          Length = 1024

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 51/105 (48%), Positives = 66/105 (62%)
 Frame = -3

Query: 317  SFLRNANQSPSTMHIDSTDADIEFIDPAILAVGKGRLAAGLDNSGFDMRSTYPTHMNNYE 138
            S LRN  Q+PS  +I S   DIEFIDPAILAVGKGRL  GL+N   DMRS +   ++ +E
Sbjct: 844  SLLRNPYQTPSG-NIASA-GDIEFIDPAILAVGKGRLPGGLNNPALDMRSNFHPQLSAFE 901

Query: 137  SEARXXXXXXXXXXXXQNPKYVEMGGNFSSRPDNYGMPSRILEQS 3
            +EAR            QN ++ ++G  FS   D YG+PSR++EQS
Sbjct: 902  NEARLQLLMQRSLSPHQNLRFADIGEGFSPLGDAYGIPSRLMEQS 946


>emb|CBI16241.3| unnamed protein product [Vitis vinifera]
          Length = 1022

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 51/105 (48%), Positives = 66/105 (62%)
 Frame = -3

Query: 317  SFLRNANQSPSTMHIDSTDADIEFIDPAILAVGKGRLAAGLDNSGFDMRSTYPTHMNNYE 138
            S LRN  Q+PS  +I S   DIEFIDPAILAVGKGRL  GL+N   DMRS +   ++ +E
Sbjct: 842  SLLRNPYQTPSG-NIASA-GDIEFIDPAILAVGKGRLPGGLNNPALDMRSNFHPQLSAFE 899

Query: 137  SEARXXXXXXXXXXXXQNPKYVEMGGNFSSRPDNYGMPSRILEQS 3
            +EAR            QN ++ ++G  FS   D YG+PSR++EQS
Sbjct: 900  NEARLQLLMQRSLSPHQNLRFADIGEGFSPLGDAYGIPSRLMEQS 944


>ref|XP_003597140.1| CCR4-NOT transcription complex subunit [Medicago truncatula]
            gi|355486188|gb|AES67391.1| CCR4-NOT transcription
            complex subunit [Medicago truncatula]
          Length = 1007

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 47/102 (46%), Positives = 62/102 (60%), Gaps = 1/102 (0%)
 Frame = -3

Query: 317  SFL-RNANQSPSTMHIDSTDADIEFIDPAILAVGKGRLAAGLDNSGFDMRSTYPTHMNNY 141
            SFL RN+ Q+PST +      DIEF+DPAILAVGKGRL   L++   DM+S Y   +N +
Sbjct: 826  SFLWRNSYQTPSTGNFGGA-GDIEFMDPAILAVGKGRLQGSLNSPMLDMQSNYSPQLNYF 884

Query: 140  ESEARXXXXXXXXXXXXQNPKYVEMGGNFSSRPDNYGMPSRI 15
            E+EAR            QN ++ E+G  FS   D+YG+ SRI
Sbjct: 885  ENEARLQLLMQRSLSPQQNHRFSEIGNTFSHLGDSYGISSRI 926


>ref|XP_003539741.1| PREDICTED: uncharacterized protein LOC100801880 [Glycine max]
          Length = 1022

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 45/105 (42%), Positives = 64/105 (60%)
 Frame = -3

Query: 317  SFLRNANQSPSTMHIDSTDADIEFIDPAILAVGKGRLAAGLDNSGFDMRSTYPTHMNNYE 138
            S LRN+ Q+PS  ++ S   DIEF+DPAILAVGKGRL   L++   D+RS +   +N +E
Sbjct: 842  SLLRNSYQTPSAGNLGSA-GDIEFMDPAILAVGKGRLQGALNSPALDIRSNFMPQLNYFE 900

Query: 137  SEARXXXXXXXXXXXXQNPKYVEMGGNFSSRPDNYGMPSRILEQS 3
            ++AR            QN ++ E+G  FS   D+Y + SR L+QS
Sbjct: 901  NDARLQLLMQRSLAPQQNLRFSEIGNTFSQLGDSYAVSSR-LDQS 944


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