BLASTX nr result

ID: Bupleurum21_contig00029500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029500
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528447.1| PREDICTED: protein Brevis radix-like 2-like ...   168   4e-40
ref|XP_002276168.1| PREDICTED: protein Brevis radix-like 2 isofo...   166   2e-39
ref|XP_003549025.1| PREDICTED: protein Brevis radix-like 2-like ...   165   3e-39
ref|XP_002521348.1| Ran GTPase binding protein, putative [Ricinu...   164   9e-39
ref|XP_004141066.1| PREDICTED: protein Brevis radix-like 4-like ...   163   2e-38

>ref|XP_003528447.1| PREDICTED: protein Brevis radix-like 2-like [Glycine max]
          Length = 368

 Score =  168 bits (426), Expect = 4e-40
 Identities = 79/98 (80%), Positives = 85/98 (86%)
 Frame = +1

Query: 1   VSGRTDSVVMXXXXXXXXWVAQVEPGVLVTFASLPNGGNDLKRIRFSRDVFNKWQAQRWW 180
           VSGRT+SVV         W+AQVEPGVL+TF SLP GGNDLKRIRFSR++FNKWQAQRWW
Sbjct: 121 VSGRTESVVFMEEDEPKEWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWW 180

Query: 181 AENYDKVMELYNVQRFNRQAAALPTPPRSEDESSKIES 294
           AENYDKVMELYNVQRFN+QA  LPTPPRSEDESSKIES
Sbjct: 181 AENYDKVMELYNVQRFNQQAVPLPTPPRSEDESSKIES 218



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 25/53 (47%), Positives = 35/53 (66%)
 Frame = +1

Query: 55  WVAQVEPGVLVTFASLPNGGNDLKRIRFSRDVFNKWQAQRWWAENYDKVMELY 213
           WV Q EPGV +T  +LP G  +L+R+RFSR+ F +  A+ WW EN  ++ E Y
Sbjct: 315 WVEQDEPGVYITIRALPGGTRELRRVRFSRERFGEMHARLWWEENRARIQEQY 367


>ref|XP_002276168.1| PREDICTED: protein Brevis radix-like 2 isoform 2 [Vitis vinifera]
           gi|297743026|emb|CBI35893.3| unnamed protein product
           [Vitis vinifera]
          Length = 371

 Score =  166 bits (419), Expect = 2e-39
 Identities = 76/98 (77%), Positives = 84/98 (85%)
 Frame = +1

Query: 1   VSGRTDSVVMXXXXXXXXWVAQVEPGVLVTFASLPNGGNDLKRIRFSRDVFNKWQAQRWW 180
           VSGR +SVV         W+AQVEPGVL+TF S+P GGNDLKRIRFSR++FNKWQAQRWW
Sbjct: 122 VSGRAESVVFMEEDEPKEWIAQVEPGVLITFVSMPQGGNDLKRIRFSREIFNKWQAQRWW 181

Query: 181 AENYDKVMELYNVQRFNRQAAALPTPPRSEDESSKIES 294
           AENYDKVMELYNVQRFNRQA  LPTPPRSEDESS++ES
Sbjct: 182 AENYDKVMELYNVQRFNRQAVPLPTPPRSEDESSRMES 219



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 25/53 (47%), Positives = 36/53 (67%)
 Frame = +1

Query: 55  WVAQVEPGVLVTFASLPNGGNDLKRIRFSRDVFNKWQAQRWWAENYDKVMELY 213
           WV Q EPGV +T  +LP+G  +L+R+RFSR+ F +  A+ WW EN  ++ E Y
Sbjct: 318 WVEQDEPGVYITIRALPDGTRELRRVRFSRERFGEMHARLWWEENRARIQEQY 370


>ref|XP_003549025.1| PREDICTED: protein Brevis radix-like 2-like [Glycine max]
          Length = 371

 Score =  165 bits (418), Expect = 3e-39
 Identities = 78/98 (79%), Positives = 84/98 (85%)
 Frame = +1

Query: 1   VSGRTDSVVMXXXXXXXXWVAQVEPGVLVTFASLPNGGNDLKRIRFSRDVFNKWQAQRWW 180
           VSGRT+SVV         W+AQVEPGVL+TF SL  GGNDLKRIRFSR++FNKWQAQRWW
Sbjct: 124 VSGRTESVVFMEEDEPKEWIAQVEPGVLITFVSLTQGGNDLKRIRFSREMFNKWQAQRWW 183

Query: 181 AENYDKVMELYNVQRFNRQAAALPTPPRSEDESSKIES 294
           AENYDKVMELYNVQRFN+QA  LPTPPRSEDESSKIES
Sbjct: 184 AENYDKVMELYNVQRFNQQAVPLPTPPRSEDESSKIES 221



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 25/53 (47%), Positives = 35/53 (66%)
 Frame = +1

Query: 55  WVAQVEPGVLVTFASLPNGGNDLKRIRFSRDVFNKWQAQRWWAENYDKVMELY 213
           WV Q EPGV +T  +LP G  +L+R+RFSR+ F +  A+ WW EN  ++ E Y
Sbjct: 318 WVEQDEPGVYITIRALPGGTRELRRVRFSRERFGEMHARLWWEENRARIQEQY 370


>ref|XP_002521348.1| Ran GTPase binding protein, putative [Ricinus communis]
           gi|223539426|gb|EEF41016.1| Ran GTPase binding protein,
           putative [Ricinus communis]
          Length = 372

 Score =  164 bits (414), Expect = 9e-39
 Identities = 78/98 (79%), Positives = 82/98 (83%)
 Frame = +1

Query: 1   VSGRTDSVVMXXXXXXXXWVAQVEPGVLVTFASLPNGGNDLKRIRFSRDVFNKWQAQRWW 180
           VSGR +SVV         WVAQVEPGVL+TF SLP GGNDLKRIRFSR++FNKWQAQRWW
Sbjct: 125 VSGRAESVVFMEEEEPKEWVAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWW 184

Query: 181 AENYDKVMELYNVQRFNRQAAALPTPPRSEDESSKIES 294
           AENYDKVMELYNVQRFN QA  LPTPPRSEDESSK ES
Sbjct: 185 AENYDKVMELYNVQRFNHQAVPLPTPPRSEDESSKPES 222



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 25/53 (47%), Positives = 35/53 (66%)
 Frame = +1

Query: 55  WVAQVEPGVLVTFASLPNGGNDLKRIRFSRDVFNKWQAQRWWAENYDKVMELY 213
           WV Q EPGV +T  +LP G  +L+R+RFSR+ F +  A+ WW EN  ++ E Y
Sbjct: 319 WVEQDEPGVYITIRALPGGTRELRRVRFSRERFGEMHARLWWDENRARIQEQY 371


>ref|XP_004141066.1| PREDICTED: protein Brevis radix-like 4-like [Cucumis sativus]
           gi|449488067|ref|XP_004157931.1| PREDICTED: protein
           Brevis radix-like 4-like [Cucumis sativus]
          Length = 371

 Score =  163 bits (412), Expect = 2e-38
 Identities = 78/95 (82%), Positives = 80/95 (84%)
 Frame = +1

Query: 10  RTDSVVMXXXXXXXXWVAQVEPGVLVTFASLPNGGNDLKRIRFSRDVFNKWQAQRWWAEN 189
           R D VV         WVAQVEPGVL+TF SLP GGNDLKRIRFSRDVFNKWQAQRWWAEN
Sbjct: 125 RVDPVVYVEESEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRWWAEN 184

Query: 190 YDKVMELYNVQRFNRQAAALPTPPRSEDESSKIES 294
           YD+VMELYNVQRFNRQA  LPTPPRSEDESSKIES
Sbjct: 185 YDRVMELYNVQRFNRQAFPLPTPPRSEDESSKIES 219



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 25/53 (47%), Positives = 35/53 (66%)
 Frame = +1

Query: 55  WVAQVEPGVLVTFASLPNGGNDLKRIRFSRDVFNKWQAQRWWAENYDKVMELY 213
           WV Q EPGV +T  +LP G  +L+R+RFSR+ F +  A+ WW EN  ++ E Y
Sbjct: 318 WVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHARLWWEENRARIHEQY 370


Top