BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029488
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817...    88   8e-16
gb|AAT40486.1| putative polyprotein [Solanum demissum]                 86   4e-15
dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis t...    84   9e-15
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi...    84   9e-15
ref|NP_063999.1| orf100a gene product (mitochondrion) [Beta vulg...    84   2e-14

>ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817175 [Glycine max]
          Length = 2045

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 43/115 (37%), Positives = 67/115 (58%)
 Frame = +3

Query: 84   SQSYASWIIDTGASDHMSFDLTLFIHTHSVDQPIQITLPDGTLKFVSLVGTINLTPQIIL 263
            S S  SWI+D+GA+DH++  L   +H+H    PI + LP+G     +  GT+ L+  I L
Sbjct: 737  SASLTSWILDSGATDHVTCSLHN-LHSHKRINPITVKLPNGQYVHATHSGTVQLSSNITL 795

Query: 264  HNVLYVPDFKHNLLSVGRLLDQNSLVAIFDTSSCVFQDSTTKTVLAIAQRNAGLY 428
            H+VLY+P F  NL+S+ +L+   +   IF ++SCV Q+      + I +   GLY
Sbjct: 796  HDVLYIPSFTFNLISISKLVSSINCELIFSSTSCVLQEMNNHMKIGIVEAKHGLY 850


>gb|AAT40486.1| putative polyprotein [Solanum demissum]
          Length = 1065

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 47/113 (41%), Positives = 68/113 (60%)
 Frame = +3

Query: 102 WIIDTGASDHMSFDLTLFIHTHSVDQPIQITLPDGTLKFVSLVGTINLTPQIILHNVLYV 281
           WI+DTGAS HMS D  LF     V  P  ++LP+G+    S+   I LT ++ LH+VLYV
Sbjct: 334 WIVDTGASHHMSGDAQLFNDLCDVP-PYLVSLPNGSTTIASMEIVI-LTDKMKLHHVLYV 391

Query: 282 PDFKHNLLSVGRLLDQNSLVAIFDTSSCVFQDSTTKTVLAIAQRNAGLYTFSS 440
           P  K NL+ V +L  +N+ + IF    CV QD T +TV+ + ++  G+Y F +
Sbjct: 392 PQLKCNLIVVSKLTIENNCLVIFSDKLCVIQDRTLRTVIGVGEQCDGVYYFKA 444


>dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1098

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 45/111 (40%), Positives = 64/111 (57%)
 Frame = +3

Query: 105 IIDTGASDHMSFDLTLFIHTHSVDQPIQITLPDGTLKFVSLVGTINLTPQIILHNVLYVP 284
           IIDTGAS HM+ D+TL  +   +  P  +T PDGT    +  GT+ L    +L +VL+VP
Sbjct: 376 IIDTGASHHMTGDITLLTNVEDII-PSPVTKPDGTASRATKRGTLALHNAYVLPDVLFVP 434

Query: 285 DFKHNLLSVGRLLDQNSLVAIFDTSSCVFQDSTTKTVLAIAQRNAGLYTFS 437
           DF   L+SV +LL     VAIF  + C  QD  T+T++   +   G+Y F+
Sbjct: 435 DFNCTLISVAKLLKHTGCVAIFTDTLCFLQDRFTRTLIGAGEEREGVYYFT 485


>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1454

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 2/130 (1%)
 Frame = +3

Query: 45  TLSAFSIDTDIHNSQSYASWIIDTGASDHMSFDLTLFIHTHSVDQPI--QITLPDGTLKF 218
           T S   I T   ++ S A+W+ID+GA+ H+S D +LF    S+D  +   + LP G    
Sbjct: 412 TYSFIGILTVARHTLSSATWVIDSGATHHVSHDRSLF---SSLDTSVLSAVNLPTGPTVK 468

Query: 219 VSLVGTINLTPQIILHNVLYVPDFKHNLLSVGRLLDQNSLVAIFDTSSCVFQDSTTKTVL 398
           +S VGT+ L   I+L NVL++P+F+ NL+S+  L D      IFD +SC  QD     +L
Sbjct: 469 ISGVGTLKLNDDILLKNVLFIPEFRLNLISISSLTDDIGSRVIFDKNSCEIQDLIKGRML 528

Query: 399 AIAQRNAGLY 428
              +R A LY
Sbjct: 529 GQGRRVANLY 538


>ref|NP_063999.1| orf100a gene product (mitochondrion) [Beta vulgaris subsp.
           vulgaris] gi|323435156|ref|YP_004222374.1| hypothetical
           protein BevumaM_p141 [Beta vulgaris subsp. maritima]
           gi|346683248|ref|YP_004842180.1| hypothetical protein
           BemaM_p136 [Beta macrocarpa] gi|9049301|dbj|BAA99311.1|
           orf100a [Beta vulgaris subsp. vulgaris]
           gi|317905607|emb|CBJ14013.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439889|emb|CBJ17589.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148044|emb|CBJ20707.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500166|emb|CBX24985.1|
           hypothetical protein [Beta macrocarpa]
           gi|384977908|emb|CBL54132.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 100

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 37/86 (43%), Positives = 61/86 (70%)
 Frame = +3

Query: 96  ASWIIDTGASDHMSFDLTLFIHTHSVDQPIQITLPDGTLKFVSLVGTINLTPQIILHNVL 275
           ++W+ID+GASDH + +  +  +  ++ + I++ LPDG++K V+ VG + ++P + L  VL
Sbjct: 10  SAWLIDSGASDHFTGNKEIMSNVRTLRKEIRVGLPDGSVKTVNEVGNVKISPNVTLTGVL 69

Query: 276 YVPDFKHNLLSVGRLLDQNSLVAIFD 353
           YV DFKHNLLSV +LL+  +L  +FD
Sbjct: 70  YVNDFKHNLLSVSKLLESRNLRLLFD 95