BLASTX nr result

ID: Bupleurum21_contig00029480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029480
         (790 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325460.1| predicted protein [Populus trichocarpa] gi|2...   416   e-114
ref|XP_002319892.1| predicted protein [Populus trichocarpa] gi|2...   415   e-114
ref|XP_002520018.1| chromosome region maintenance protein 1/expo...   413   e-113
ref|XP_003633992.1| PREDICTED: exportin-1 isoform 3 [Vitis vinif...   412   e-113
ref|XP_002275630.1| PREDICTED: exportin-1 isoform 1 [Vitis vinif...   412   e-113

>ref|XP_002325460.1| predicted protein [Populus trichocarpa] gi|222862335|gb|EEE99841.1|
           predicted protein [Populus trichocarpa]
          Length = 1076

 Score =  416 bits (1069), Expect = e-114
 Identities = 208/268 (77%), Positives = 234/268 (87%), Gaps = 6/268 (2%)
 Frame = -3

Query: 788 LNSEFQLIHELCLYVLSASQRAELIKVTLATLHAFLSWIPLGYIFESPLLETLLKFFPFP 609
           LNSEFQLIHELCLYVLSASQR ELI+ TL+TLHAFLSWIPLGYIFESPLLETLLKFFP P
Sbjct: 189 LNSEFQLIHELCLYVLSASQRTELIQATLSTLHAFLSWIPLGYIFESPLLETLLKFFPMP 248

Query: 608 SYQNLTLQCLTEVTALNFGDFYGDQYAKLFAVFILQLQAIVPDSSKIPQAYANGSSEEQA 429
           SY+NLTLQCLTEV ALNFGDFY  QY K++  F++QLQAI+P ++KIP+AYANGSSEEQA
Sbjct: 249 SYRNLTLQCLTEVAALNFGDFYNMQYIKMYNFFMVQLQAILPSTTKIPEAYANGSSEEQA 308

Query: 428 FIQNLALFFTSFFKCHIRVLESTQGNTSILLVGLDYLIDISYVDDNEVFKVCLDYWNTLV 249
           FIQNLALFFTSF+K HIRVLES+Q N S LL+GL+YLI+IS+VDD EVFKVCLDYWN+LV
Sbjct: 309 FIQNLALFFTSFYKSHIRVLESSQENISALLMGLEYLINISFVDDTEVFKVCLDYWNSLV 368

Query: 248 SEVFEAKRSLS------NMMGLQMPLFNPVASSLGFDVLQRRQLYAMPLSKLRLLMICRM 87
            E+FE   +L       NMMGLQMPL + +   LG  +LQRRQLYA P+SKLR+LMICRM
Sbjct: 369 LELFEPHHNLDTPAATVNMMGLQMPLLHGMVDGLGSQILQRRQLYAAPMSKLRMLMICRM 428

Query: 86  AKPEEVIIVEDENGNIVRETMKDNDVLV 3
           AKPEEV+IVEDENGNIVRETMKDNDVLV
Sbjct: 429 AKPEEVLIVEDENGNIVRETMKDNDVLV 456


>ref|XP_002319892.1| predicted protein [Populus trichocarpa] gi|222858268|gb|EEE95815.1|
           predicted protein [Populus trichocarpa]
          Length = 1076

 Score =  415 bits (1066), Expect = e-114
 Identities = 207/268 (77%), Positives = 234/268 (87%), Gaps = 6/268 (2%)
 Frame = -3

Query: 788 LNSEFQLIHELCLYVLSASQRAELIKVTLATLHAFLSWIPLGYIFESPLLETLLKFFPFP 609
           LNSEFQLIHELCLYVLSASQR ELI+ TL+TLHAFLSWIPLGYIFESPLLETLLKFFP P
Sbjct: 189 LNSEFQLIHELCLYVLSASQRTELIRATLSTLHAFLSWIPLGYIFESPLLETLLKFFPMP 248

Query: 608 SYQNLTLQCLTEVTALNFGDFYGDQYAKLFAVFILQLQAIVPDSSKIPQAYANGSSEEQA 429
           SY+NLTLQCLTEV ALNFGDFY  QY K++  F++QLQAI+P ++ IP+AYANGSSEEQA
Sbjct: 249 SYRNLTLQCLTEVAALNFGDFYNIQYVKMYNFFMVQLQAILPLTTNIPEAYANGSSEEQA 308

Query: 428 FIQNLALFFTSFFKCHIRVLESTQGNTSILLVGLDYLIDISYVDDNEVFKVCLDYWNTLV 249
           FIQNLALFFTSF+K HI+VLESTQ N + LL+GL+YLI+I YVDD EVFKVCLDYWN+LV
Sbjct: 309 FIQNLALFFTSFYKSHIQVLESTQENITALLMGLEYLINICYVDDTEVFKVCLDYWNSLV 368

Query: 248 SEVFEAKRSLS------NMMGLQMPLFNPVASSLGFDVLQRRQLYAMPLSKLRLLMICRM 87
            E+FEA+ +L       NMMGLQMPL + +   LG  +LQRRQLYA P+SKLR+LMICRM
Sbjct: 369 LELFEARHNLDNPAVAVNMMGLQMPLLHGMVDGLGSQILQRRQLYATPMSKLRMLMICRM 428

Query: 86  AKPEEVIIVEDENGNIVRETMKDNDVLV 3
           AKPEEV+IVEDENGNIVRETMKDNDVLV
Sbjct: 429 AKPEEVLIVEDENGNIVRETMKDNDVLV 456


>ref|XP_002520018.1| chromosome region maintenance protein 1/exportin, putative [Ricinus
           communis] gi|223540782|gb|EEF42342.1| chromosome region
           maintenance protein 1/exportin, putative [Ricinus
           communis]
          Length = 1069

 Score =  413 bits (1062), Expect = e-113
 Identities = 205/268 (76%), Positives = 234/268 (87%), Gaps = 6/268 (2%)
 Frame = -3

Query: 788 LNSEFQLIHELCLYVLSASQRAELIKVTLATLHAFLSWIPLGYIFESPLLETLLKFFPFP 609
           LNSEFQLIHELCLYVLSASQR ELI+ TL+TLHAFLSWIPLGYIFESPLLETLLKFFP P
Sbjct: 194 LNSEFQLIHELCLYVLSASQRTELIRATLSTLHAFLSWIPLGYIFESPLLETLLKFFPMP 253

Query: 608 SYQNLTLQCLTEVTALNFGDFYGDQYAKLFAVFILQLQAIVPDSSKIPQAYANGSSEEQA 429
           SY+NLTLQCLTEV ALNFGDFY  QY K++  F++QLQAI+P ++ IP+AYA+GSSEEQA
Sbjct: 254 SYRNLTLQCLTEVAALNFGDFYNMQYVKMYTFFMVQLQAILPPTTNIPEAYAHGSSEEQA 313

Query: 428 FIQNLALFFTSFFKCHIRVLESTQGNTSILLVGLDYLIDISYVDDNEVFKVCLDYWNTLV 249
           FIQNL+LFFTSF+K HIRVLE+TQ N S LL+GL+YLI+ISYVDD EVFKVCLDYWN+LV
Sbjct: 314 FIQNLSLFFTSFYKSHIRVLETTQENISALLMGLEYLINISYVDDTEVFKVCLDYWNSLV 373

Query: 248 SEVFEAKRSL------SNMMGLQMPLFNPVASSLGFDVLQRRQLYAMPLSKLRLLMICRM 87
            E+FEA  +L      +NMMGLQMPL + +   +G  +LQRRQLY  P+SKLR+LMICRM
Sbjct: 374 LELFEAHHNLDNPAVTANMMGLQMPLLHGMVDGIGSQILQRRQLYTGPMSKLRMLMICRM 433

Query: 86  AKPEEVIIVEDENGNIVRETMKDNDVLV 3
           AKPEEV+IVEDENGNIVRETMKDNDVLV
Sbjct: 434 AKPEEVLIVEDENGNIVRETMKDNDVLV 461


>ref|XP_003633992.1| PREDICTED: exportin-1 isoform 3 [Vitis vinifera]
          Length = 1069

 Score =  412 bits (1058), Expect = e-113
 Identities = 207/268 (77%), Positives = 234/268 (87%), Gaps = 6/268 (2%)
 Frame = -3

Query: 788 LNSEFQLIHELCLYVLSASQRAELIKVTLATLHAFLSWIPLGYIFESPLLETLLKFFPFP 609
           LNSEFQLIHELCLYVLSASQR ELI+ TLATLHAFLSWIPLGYIFESPLLETLLKFFP P
Sbjct: 189 LNSEFQLIHELCLYVLSASQRTELIRATLATLHAFLSWIPLGYIFESPLLETLLKFFPVP 248

Query: 608 SYQNLTLQCLTEVTALNFGDFYGDQYAKLFAVFILQLQAIVPDSSKIPQAYANGSSEEQA 429
           SY+NLTLQCLTEV ALNFGDFY  QY K++ +F++QLQ+I+P ++ IP+AYA+GSSEEQA
Sbjct: 249 SYRNLTLQCLTEVAALNFGDFYNLQYVKMYNIFMVQLQSILPTTTNIPEAYAHGSSEEQA 308

Query: 428 FIQNLALFFTSFFKCHIRVLESTQGNTSILLVGLDYLIDISYVDDNEVFKVCLDYWNTLV 249
           FIQNLALFFTSF+K HIRVLES+Q N S LL+GL+YLI ISYVDD EVFKVCLDYWN+LV
Sbjct: 309 FIQNLALFFTSFYKSHIRVLESSQENISALLLGLEYLIGISYVDDTEVFKVCLDYWNSLV 368

Query: 248 SEVFEAKRSL------SNMMGLQMPLFNPVASSLGFDVLQRRQLYAMPLSKLRLLMICRM 87
            E+FEA  +L      +NMMGLQ+PL   +   LG  +LQRRQLY+ P+SKLRLLMICRM
Sbjct: 369 LELFEAHHNLDNPAVAANMMGLQIPLIPGMVDGLGSQLLQRRQLYSGPMSKLRLLMICRM 428

Query: 86  AKPEEVIIVEDENGNIVRETMKDNDVLV 3
           AKPEEV+IVEDENGNIVRETMKDNDVLV
Sbjct: 429 AKPEEVLIVEDENGNIVRETMKDNDVLV 456


>ref|XP_002275630.1| PREDICTED: exportin-1 isoform 1 [Vitis vinifera]
           gi|147799770|emb|CAN61845.1| hypothetical protein
           VITISV_008353 [Vitis vinifera]
           gi|297737334|emb|CBI26535.3| unnamed protein product
           [Vitis vinifera]
          Length = 1076

 Score =  412 bits (1058), Expect = e-113
 Identities = 207/268 (77%), Positives = 234/268 (87%), Gaps = 6/268 (2%)
 Frame = -3

Query: 788 LNSEFQLIHELCLYVLSASQRAELIKVTLATLHAFLSWIPLGYIFESPLLETLLKFFPFP 609
           LNSEFQLIHELCLYVLSASQR ELI+ TLATLHAFLSWIPLGYIFESPLLETLLKFFP P
Sbjct: 189 LNSEFQLIHELCLYVLSASQRTELIRATLATLHAFLSWIPLGYIFESPLLETLLKFFPVP 248

Query: 608 SYQNLTLQCLTEVTALNFGDFYGDQYAKLFAVFILQLQAIVPDSSKIPQAYANGSSEEQA 429
           SY+NLTLQCLTEV ALNFGDFY  QY K++ +F++QLQ+I+P ++ IP+AYA+GSSEEQA
Sbjct: 249 SYRNLTLQCLTEVAALNFGDFYNLQYVKMYNIFMVQLQSILPTTTNIPEAYAHGSSEEQA 308

Query: 428 FIQNLALFFTSFFKCHIRVLESTQGNTSILLVGLDYLIDISYVDDNEVFKVCLDYWNTLV 249
           FIQNLALFFTSF+K HIRVLES+Q N S LL+GL+YLI ISYVDD EVFKVCLDYWN+LV
Sbjct: 309 FIQNLALFFTSFYKSHIRVLESSQENISALLLGLEYLIGISYVDDTEVFKVCLDYWNSLV 368

Query: 248 SEVFEAKRSL------SNMMGLQMPLFNPVASSLGFDVLQRRQLYAMPLSKLRLLMICRM 87
            E+FEA  +L      +NMMGLQ+PL   +   LG  +LQRRQLY+ P+SKLRLLMICRM
Sbjct: 369 LELFEAHHNLDNPAVAANMMGLQIPLIPGMVDGLGSQLLQRRQLYSGPMSKLRLLMICRM 428

Query: 86  AKPEEVIIVEDENGNIVRETMKDNDVLV 3
           AKPEEV+IVEDENGNIVRETMKDNDVLV
Sbjct: 429 AKPEEVLIVEDENGNIVRETMKDNDVLV 456


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