BLASTX nr result

ID: Bupleurum21_contig00029474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029474
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141281.1| PREDICTED: uncharacterized protein LOC101219...    69   3e-10
ref|XP_003589113.1| hypothetical protein MTR_1g018620 [Medicago ...    64   1e-08
ref|XP_003544481.1| PREDICTED: uncharacterized protein LOC100792...    63   2e-08
ref|XP_002285118.1| PREDICTED: uncharacterized protein LOC100252...    62   4e-08
ref|XP_003550314.1| PREDICTED: uncharacterized protein LOC100800...    60   1e-07

>ref|XP_004141281.1| PREDICTED: uncharacterized protein LOC101219963 [Cucumis sativus]
           gi|449511692|ref|XP_004164028.1| PREDICTED:
           uncharacterized LOC101219963 [Cucumis sativus]
          Length = 466

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/60 (53%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
 Frame = -1

Query: 217 RKRVNHVVL-PEFLGEKSGGVRPVETLAPLREGPDTEESMDGRDSKWGQWMRAPLPRAPS 41
           R+R NH +  PE + E+SG +RP E L+PL+EGPD  ES + ++ KWG WMR  L RAPS
Sbjct: 41  RRRKNHQMSQPELVIERSGSLRPEEALSPLKEGPDGNESRESKEGKWGSWMRGQLCRAPS 100


>ref|XP_003589113.1| hypothetical protein MTR_1g018620 [Medicago truncatula]
           gi|87241418|gb|ABD33276.1| Protein of unknown function
           DUF620 [Medicago truncatula] gi|355478161|gb|AES59364.1|
           hypothetical protein MTR_1g018620 [Medicago truncatula]
          Length = 470

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
 Frame = -1

Query: 217 RKRVNHVVLPEFLGEKSGGVRPVETLAPLREGPDTEESMD--GRDSKWGQWMRAPLPRAP 44
           R+R N  V PE    +SG +RP+E L+PL+EGPD  +  D   R+ KWG WM+  L RAP
Sbjct: 42  RRRKNQGVPPELFMTRSGSLRPLEALSPLKEGPDGTDGEDVGNREGKWGHWMKGQLARAP 101

Query: 43  S 41
           S
Sbjct: 102 S 102


>ref|XP_003544481.1| PREDICTED: uncharacterized protein LOC100792748 [Glycine max]
          Length = 473

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/62 (48%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
 Frame = -1

Query: 217 RKRVNHVVLPEFLGEKSGGVRPVETLAPLREGPD-TEESMDGR--DSKWGQWMRAPLPRA 47
           R+R +H   PE    +SG +RP E L+PL+EGPD T+   D    + +WGQWM+ PL RA
Sbjct: 42  RRRKHHAPPPELFIARSGSLRPAEALSPLKEGPDGTDGGQDSSRGEGRWGQWMKGPLARA 101

Query: 46  PS 41
           PS
Sbjct: 102 PS 103


>ref|XP_002285118.1| PREDICTED: uncharacterized protein LOC100252320 [Vitis vinifera]
           gi|147838437|emb|CAN63253.1| hypothetical protein
           VITISV_028487 [Vitis vinifera]
          Length = 469

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/62 (54%), Positives = 41/62 (66%), Gaps = 4/62 (6%)
 Frame = -1

Query: 214 KRVNHVVLPEFLGEKSGGVRPVETLAPLREGPDTEESMDGRDSK----WGQWMRAPLPRA 47
           K+ N V  P+ L  +SG +RPVETL+PL EGPD E S  G DS+    WGQWM+  L RA
Sbjct: 40  KKQNQVPQPDLLIGRSGNLRPVETLSPLMEGPDPEGSECG-DSRVEGGWGQWMKGQLSRA 98

Query: 46  PS 41
           PS
Sbjct: 99  PS 100


>ref|XP_003550314.1| PREDICTED: uncharacterized protein LOC100800721 [Glycine max]
          Length = 476

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
 Frame = -1

Query: 217 RKRVNHVVLPEFLGEKSGGVRPVETLAPLREGPDTEESMDGRDS-----KWGQWMRAPLP 53
           R+R ++   PE    +SG +RP E L+PL+EGPD  +   G DS     +WGQWM+ PL 
Sbjct: 42  RRRKHYAPPPELFIARSGSLRPAEALSPLKEGPDGTDD-GGHDSTRGEGRWGQWMKGPLA 100

Query: 52  RAPS 41
           RAPS
Sbjct: 101 RAPS 104


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