BLASTX nr result

ID: Bupleurum21_contig00029470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029470
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331216.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
ref|XP_002533240.1| conserved hypothetical protein [Ricinus comm...   144   7e-33
ref|XP_004141823.1| PREDICTED: uncharacterized protein LOC101214...   106   2e-21
gb|ADE76149.1| unknown [Picea sitchensis]                              94   9e-18
ref|XP_002979044.1| hypothetical protein SELMODRAFT_418701 [Sela...    73   3e-11

>ref|XP_002331216.1| predicted protein [Populus trichocarpa] gi|222873337|gb|EEF10468.1|
           predicted protein [Populus trichocarpa]
          Length = 249

 Score =  150 bits (378), Expect = 1e-34
 Identities = 82/147 (55%), Positives = 108/147 (73%), Gaps = 5/147 (3%)
 Frame = +1

Query: 76  GTLTLVVFFVLKPQKPIFSLQTVDLDSYKLDVYSNSTLFVSSVVSLCLNAQNPNKVGIKY 255
           G   LVV F+LKPQ+P FSL+T+ +DSYKL+ YSNSTL +SSVVSL LNAQN NKVGIKY
Sbjct: 41  GIAALVVVFILKPQEPRFSLETIRVDSYKLNAYSNSTLLISSVVSLLLNAQNHNKVGIKY 100

Query: 256 SRSRLHIFNEDIRIGLIRVPEFYQPAHSTNVSVPTRILFHCVNISQIL-SGVSVVSSH-T 429
           S SRLHIF++ I IGLIRVP+FYQPAHS NV +  +I    +N+++I   GVS   +   
Sbjct: 101 SPSRLHIFHQGIPIGLIRVPQFYQPAHSDNVGLTAQISLPRLNVTRIFDQGVSKEKARKN 160

Query: 430 LSKIRIVGDIKAHLQVFHIT---VKVA 501
           + +++I+GD + HL +  +T   +KVA
Sbjct: 161 VLQMKILGDARLHLLLSRLTLPKIKVA 187


>ref|XP_002533240.1| conserved hypothetical protein [Ricinus communis]
           gi|223526938|gb|EEF29141.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 219

 Score =  144 bits (363), Expect = 7e-33
 Identities = 69/141 (48%), Positives = 105/141 (74%), Gaps = 2/141 (1%)
 Frame = +1

Query: 76  GTLTLVVFFVLKPQKPIFSLQTVDLDSYKLDVYSNSTLFVSSVVSLCLNAQNPNKVGIKY 255
           G L L  F +LKPQ+P FSL T+++DSY+L VYS S+LF+SS VSL LNA N NKVGI+Y
Sbjct: 24  GILALAFFLILKPQEPKFSLSTIEVDSYRLSVYSGSSLFISSNVSLILNAINHNKVGIRY 83

Query: 256 SRSRLHIFNEDIRIGLIRVPEFYQPAHSTNVSVPTRILFHCVNISQILSG--VSVVSSHT 429
           S S L+++   I+IG++++P FYQPA+S NV V T+I  HC+N+SQI++   +   +S  
Sbjct: 84  SPSCLNLYYHGIQIGVVKIPGFYQPANSDNVGVITKISLHCINVSQIINEGFLQKKASKK 143

Query: 430 LSKIRIVGDIKAHLQVFHITV 492
           + +++++GDI+  L++ H+T+
Sbjct: 144 VVQMKLIGDIRVQLRLLHLTM 164


>ref|XP_004141823.1| PREDICTED: uncharacterized protein LOC101214000 [Cucumis sativus]
           gi|449492552|ref|XP_004159031.1| PREDICTED:
           uncharacterized LOC101214000 [Cucumis sativus]
          Length = 231

 Score =  106 bits (264), Expect = 2e-21
 Identities = 64/161 (39%), Positives = 94/161 (58%), Gaps = 1/161 (0%)
 Frame = +1

Query: 13  FSLKKSCXXXXXXXXXXXXXXGTLTLVVFFVLKPQKPIFSLQTVDLDSYKLDVYSNSTLF 192
           ++LK+ C                  L V F+LKP++PIFSL +V LD Y + + S S + 
Sbjct: 23  YTLKRFCFFLLFLAIFSIIAIAIAALPVIFLLKPREPIFSLHSVRLDWYNITIRSGSPI- 81

Query: 193 VSSVVSLCLNAQNPNKVGIKYSRSR-LHIFNEDIRIGLIRVPEFYQPAHSTNVSVPTRIL 369
           +SSV +L LN+QNPNK+GIKYS SR L I++E   IG IRVPE +QPA S    V TR+L
Sbjct: 82  LSSVFTLTLNSQNPNKLGIKYSPSRLLLIYDESAVIGTIRVPEVFQPARSGERIVRTRLL 141

Query: 370 FHCVNISQILSGVSVVSSHTLSKIRIVGDIKAHLQVFHITV 492
            H +++  +       ++    +++I+GD+   L V H+ V
Sbjct: 142 LHQLDVDLL------ETTREFVEMKIIGDVGVELFVLHMKV 176


>gb|ADE76149.1| unknown [Picea sitchensis]
          Length = 222

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 8/166 (4%)
 Frame = +1

Query: 13  FSLKKSCXXXXXXXXXXXXXXGTLTLVVFFVLKPQKPIFSLQTVDLDSYKL-----DVYS 177
           FS  + C              G + LVVF VLKP+KP F+LQ+V + S +         +
Sbjct: 25  FSFTRCCCCVFSLIFIVVAIVGVIALVVFMVLKPKKPEFNLQSVTVVSLETYPPLGSALT 84

Query: 178 NSTLFVSSVVSLCLNAQNPNKVGIKYSRSRLHIFNEDIRIGLIRVPEFYQPAHSTNVSVP 357
           +  +F++  +++   A NPNKVGIKYS S  ++  +D+ +G+  VP FYQP+HS N +V 
Sbjct: 85  SMEVFLTLNITMAFTALNPNKVGIKYSGSEFYVMYKDMPLGVAVVPPFYQPSHS-NTTVQ 143

Query: 358 TRILFHCVNISQILSGVSVVSSHTLS---KIRIVGDIKAHLQVFHI 486
           T ++   VNI Q  + + ++   T++    +RI GD+ A ++V  I
Sbjct: 144 TELVVTRVNILQ-AAALDLIRDATVNDRVPLRITGDVGARIRVLQI 188


>ref|XP_002979044.1| hypothetical protein SELMODRAFT_418701 [Selaginella moellendorffii]
           gi|302819695|ref|XP_002991517.1| hypothetical protein
           SELMODRAFT_448445 [Selaginella moellendorffii]
           gi|300140719|gb|EFJ07439.1| hypothetical protein
           SELMODRAFT_448445 [Selaginella moellendorffii]
           gi|300153362|gb|EFJ20001.1| hypothetical protein
           SELMODRAFT_418701 [Selaginella moellendorffii]
          Length = 218

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 48/141 (34%), Positives = 79/141 (56%), Gaps = 6/141 (4%)
 Frame = +1

Query: 82  LTLVVFFVLKPQKPIFSLQTVDLDSYKLD-----VYSNSTLFVSSVVSLCLNAQNPNKVG 246
           + LV+F VL+P++P FSLQ   + S++++       S   + +S  + L L A NPNKVG
Sbjct: 44  VALVLFLVLRPRRPDFSLQDARIVSFRVEQPAPLTTSGMAVLLSMDLELTLAAHNPNKVG 103

Query: 247 IKYSRSRLHIFNEDIRIGLIRVPEFYQPAHSTNVSVPTRILFHCVNISQILS-GVSVVSS 423
           I+YS +R++I+     +GL   P FYQPA S+ + V   I+   VN+ Q  +  +   ++
Sbjct: 104 IRYSATRIYIYYRRNFVGLAVAPAFYQPARSSGL-VRASIVVDRVNVLQATAEDLLQDAA 162

Query: 424 HTLSKIRIVGDIKAHLQVFHI 486
             + K+ + G I A + V  I
Sbjct: 163 SGIVKLDLRGKIPARIVVLGI 183


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