BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029468
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]   101   6e-20
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   100   2e-19
gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptas...    96   3e-18
ref|XP_002522452.1| nucleic acid binding protein, putative [Rici...    95   7e-18
emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]    93   3e-17

>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score =  101 bits (252), Expect = 6e-20
 Identities = 54/125 (43%), Positives = 68/125 (54%)
 Frame = -3

Query: 376  IMKARYFPNTDFLNAELGKNPSYVWRSILSAQEAIKMGCRRKIGNGQSTLVWEVPWLPDP 197
            I +ARYF N+ FLNAELG NPSY+WRSIL+AQ+ +KMGC   I +G    VW   WLP+ 
Sbjct: 1439 IFQARYFRNSSFLNAELGSNPSYMWRSILAAQDLLKMGCYWSIASGTKVQVWGDSWLPNS 1498

Query: 196  DNGFMTTNCPLQLQGTTVANLMTDDGNGWDVDALHDICNSRDVELIKRIPIPKREVDDSW 17
             N  + T       G  V  L+T     W  D + D    RD +LI  IP+P    +D  
Sbjct: 1499 SNRLIITPHVADFDGIKVDELITK--GLWHEDFIRDKFMGRDADLILSIPLPMSSREDQI 1556

Query: 16   LWLKD 2
             W  D
Sbjct: 1557 SWSFD 1561


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  100 bits (248), Expect = 2e-19
 Identities = 54/125 (43%), Positives = 68/125 (54%)
 Frame = -3

Query: 376 IMKARYFPNTDFLNAELGKNPSYVWRSILSAQEAIKMGCRRKIGNGQSTLVWEVPWLPDP 197
           I +ARYF N+ FLNAELG NPSY+WRSIL+AQ  +K GC   I +G    VW   WLPD 
Sbjct: 352 IFQARYFRNSSFLNAELGSNPSYMWRSILAAQGLLKRGCYWSIASGTKVQVWGDSWLPDS 411

Query: 196 DNGFMTTNCPLQLQGTTVANLMTDDGNGWDVDALHDICNSRDVELIKRIPIPKREVDDSW 17
            N  + T       G  V  L+T+    W  D + D   +RD +LI  IP+P    +D  
Sbjct: 412 SNRLIITPPVAGFDGIKVDELITE--GLWREDFIRDKFMARDADLILSIPLPMSSREDQI 469

Query: 16  LWLKD 2
            W  D
Sbjct: 470 SWSFD 474


>gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 573

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 47/122 (38%), Positives = 68/122 (55%)
 Frame = -3

Query: 376 IMKARYFPNTDFLNAELGKNPSYVWRSILSAQEAIKMGCRRKIGNGQSTLVWEVPWLPDP 197
           I+KA+YFP  DFL+A LG NPSY WRS+ S Q  + +G R KIG+G    VW +PW+ + 
Sbjct: 416 ILKAKYFPRRDFLDATLGHNPSYTWRSLWSTQSLLTLGHRWKIGDGSKINVWSMPWIRNL 475

Query: 196 DNGFMTTNCPLQLQGTTVANLMTDDGNGWDVDALHDICNSRDVELIKRIPIPKREVDDSW 17
            +   +T+ PL     TV +L++ D N WD   +  + N  +   I   P+  R   D  
Sbjct: 476 LSLKPSTSPPLHQHDLTVNSLLSADFNSWDTTLVQSLFNDAEAAAILSTPLFARSGSDVR 535

Query: 16  LW 11
           +W
Sbjct: 536 IW 537


>ref|XP_002522452.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223538337|gb|EEF39944.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 483

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 48/125 (38%), Positives = 68/125 (54%)
 Frame = -3

Query: 376 IMKARYFPNTDFLNAELGKNPSYVWRSILSAQEAIKMGCRRKIGNGQSTLVWEVPWLPDP 197
           + KARY+PN DFL++ LG NPSY+W S+   ++ I  G + KIG G    +    WL D 
Sbjct: 31  LYKARYYPNGDFLSSLLGTNPSYIWASLQQVRDLICKGVQWKIGKGTEVSIGLHEWLLDA 90

Query: 196 DNGFMTTNCPLQLQGTTVANLMTDDGNGWDVDALHDICNSRDVELIKRIPIPKREVDDSW 17
            NGF+ TN P +L+   V +L+      WD + L+D+ + RD  LI  I +      D  
Sbjct: 91  SNGFIETNLPDELRLQPVCSLLKPGTCDWDQEILNDLFSERDKNLINSIVLSPTVGTDQL 150

Query: 16  LWLKD 2
            W KD
Sbjct: 151 FWFKD 155


>emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]
          Length = 1413

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 52/125 (41%), Positives = 67/125 (53%)
 Frame = -3

Query: 376  IMKARYFPNTDFLNAELGKNPSYVWRSILSAQEAIKMGCRRKIGNGQSTLVWEVPWLPDP 197
            I +ARYF N+ FLNAELG NPSY+WRSIL+AQ+ +K G    I +G    VW   WLPD 
Sbjct: 1082 IFQARYFINSSFLNAELGSNPSYMWRSILAAQDLLKRGYYWSIASGTKVQVWGDSWLPDN 1141

Query: 196  DNGFMTTNCPLQLQGTTVANLMTDDGNGWDVDALHDICNSRDVELIKRIPIPKREVDDSW 17
             N  + T          V  L+T+    W  D + D   +RD +LI  IP+P    +D  
Sbjct: 1142 SNRLIITPPIAGFDEIKVDELITE--GLWREDFIRDKFMARDADLILYIPLPMSSREDQI 1199

Query: 16   LWLKD 2
             W  D
Sbjct: 1200 SWSFD 1204