BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029464
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB48347.1| reverse transcriptase, partial [Arabidopsis thali...    56   3e-06
gb|ABA96650.1| retrotransposon protein, putative, unclassified [...    56   3e-06
gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Ja...    56   3e-06
gb|ABB46931.2| retrotransposon protein, putative, unclassified [...    56   3e-06
pir||S65819 RNA-directed DNA polymerase (EC 2.7.7.49) (clone N2)...    56   3e-06

>gb|AAB48347.1| reverse transcriptase, partial [Arabidopsis thaliana]
          Length = 199

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/59 (44%), Positives = 36/59 (61%)
 Frame = -2

Query: 320 FLETWDVVSDDFCKGIQSFFDLNVLPRAFQATALALITKTVVPTVMADIKPISLCIVVY 144
           F   W++V       +Q FF++ VLP  +  T L LI KT+ PT M D++PISLC V+Y
Sbjct: 12  FQRYWNIVGVQVISEVQRFFEMGVLPVEWNFTHLCLIPKTIHPTEMVDLRPISLCSVLY 70


>gb|ABA96650.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1100

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/59 (40%), Positives = 34/59 (57%)
 Frame = -2

Query: 320 FLETWDVVSDDFCKGIQSFFDLNVLPRAFQATALALITKTVVPTVMADIKPISLCIVVY 144
           F   W+V+ +D CK ++ FFD  V+P     TA+ LI K      + D +PISLC V+Y
Sbjct: 573 FQRNWEVLKNDVCKAVKLFFDQKVMPEGVNTTAIVLIPKKKESKELKDFRPISLCNVIY 631


>gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1888

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/59 (40%), Positives = 33/59 (55%)
 Frame = -2

Query: 320  FLETWDVVSDDFCKGIQSFFDLNVLPRAFQATALALITKTVVPTVMADIKPISLCIVVY 144
            +   W ++ DD  + +Q FF L  +P     TA+ LI KT  P  + D +PISLC VVY
Sbjct: 1027 YQRNWAILKDDIVRAVQEFFSLGTMPSGVNETAIVLIPKTEQPQELKDFRPISLCNVVY 1085


>gb|ABB46931.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1853

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/59 (40%), Positives = 33/59 (55%)
 Frame = -2

Query: 320  FLETWDVVSDDFCKGIQSFFDLNVLPRAFQATALALITKTVVPTVMADIKPISLCIVVY 144
            +   W ++ DD  + +Q FF L  +P     TA+ LI KT  P  + D +PISLC VVY
Sbjct: 992  YQRNWAILKDDIVRAVQEFFSLGTMPSGVNETAIVLIPKTEQPQELKDFRPISLCNVVY 1050


>pir||S65819 RNA-directed DNA polymerase (EC 2.7.7.49) (clone N2) - Arabidopsis
           thaliana retrotransposon Ta24 (fragment)
          Length = 184

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/59 (44%), Positives = 36/59 (61%)
 Frame = -2

Query: 320 FLETWDVVSDDFCKGIQSFFDLNVLPRAFQATALALITKTVVPTVMADIKPISLCIVVY 144
           F   W++V       +Q FF++ VLP  +  T L LI KT+ PT M D++PISLC V+Y
Sbjct: 6   FQRYWNIVGVQVISEVQRFFEMGVLPVEWNFTHLCLIPKTIHPTEMVDLRPISLCSVLY 64