BLASTX nr result

ID: Bupleurum21_contig00029463 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029463
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522454.1| r2r3-myb transcription factor, putative [Ric...   242   2e-62
gb|AFP65734.1| R2R3 MYB, partial [Iris fulva]                         239   1e-61
ref|XP_003607746.1| Myb-like protein A [Medicago truncatula] gi|...   239   1e-61
gb|ADL36763.1| MYB domain class transcription factor [Malus x do...   239   2e-61
ref|XP_002269342.2| PREDICTED: uncharacterized protein LOC100253...   238   5e-61

>ref|XP_002522454.1| r2r3-myb transcription factor, putative [Ricinus communis]
           gi|223538339|gb|EEF39946.1| r2r3-myb transcription
           factor, putative [Ricinus communis]
          Length = 521

 Score =  242 bits (618), Expect = 2e-62
 Identities = 114/134 (85%), Positives = 122/134 (91%)
 Frame = -2

Query: 404 ASGKMDTDSCGQSKLCSRGHWRPAEDSRLKDLVALYGPQNWNLIAEKLEGRSGKSCRLRW 225
           +SGK    S GQSKLC+RGHWRPAED++LK+LVALYGPQNWNLIAEKLEGRSGKSCRLRW
Sbjct: 154 SSGKETDSSSGQSKLCARGHWRPAEDTKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRW 213

Query: 224 FNQLDPRINRRAFNXXXXERLMAAHRLYGNKWALIARLFPGRTDNAVKNHWHVIMARKYR 45
           FNQLDPRINRRAF     ERLM AHRLYGNKWA+IARLFPGRTDNAVKNHWHVIMARKYR
Sbjct: 214 FNQLDPRINRRAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYR 273

Query: 44  EQSSAYRRRKMGQT 3
           EQSSAYRRRK+ Q+
Sbjct: 274 EQSSAYRRRKLSQS 287


>gb|AFP65734.1| R2R3 MYB, partial [Iris fulva]
          Length = 292

 Score =  239 bits (611), Expect = 1e-61
 Identities = 110/124 (88%), Positives = 119/124 (95%)
 Frame = -2

Query: 377 CGQSKLCSRGHWRPAEDSRLKDLVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRIN 198
           CGQSKLC+RGHWRPAED++LK+LVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRIN
Sbjct: 61  CGQSKLCARGHWRPAEDTKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRIN 120

Query: 197 RRAFNXXXXERLMAAHRLYGNKWALIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRR 18
           RRAF+    E+LMAAHRLYGNKWA+IARLFPGRTDNAVKNHWHVIMARKYREQSSAY+RR
Sbjct: 121 RRAFSEEEEEKLMAAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYKRR 180

Query: 17  KMGQ 6
           K+ Q
Sbjct: 181 KLSQ 184


>ref|XP_003607746.1| Myb-like protein A [Medicago truncatula]
           gi|355508801|gb|AES89943.1| Myb-like protein A [Medicago
           truncatula]
          Length = 420

 Score =  239 bits (611), Expect = 1e-61
 Identities = 115/138 (83%), Positives = 125/138 (90%), Gaps = 1/138 (0%)
 Frame = -2

Query: 413 NGYASGK-MDTDSCGQSKLCSRGHWRPAEDSRLKDLVALYGPQNWNLIAEKLEGRSGKSC 237
           N Y SGK +DT   G SKLC+RGHWRPAEDS+LK+LVALYGPQNWNLIAEKLEGRSGKSC
Sbjct: 80  NSYVSGKEVDT---GHSKLCARGHWRPAEDSKLKELVALYGPQNWNLIAEKLEGRSGKSC 136

Query: 236 RLRWFNQLDPRINRRAFNXXXXERLMAAHRLYGNKWALIARLFPGRTDNAVKNHWHVIMA 57
           RLRWFNQLDPRINRRAF+    ERLM AHR+YGNKWA+IARLFPGRTDNAVKNHWHVIMA
Sbjct: 137 RLRWFNQLDPRINRRAFSDEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMA 196

Query: 56  RKYREQSSAYRRRKMGQT 3
           RKYREQSSAYRRR++ Q+
Sbjct: 197 RKYREQSSAYRRRRLNQS 214


>gb|ADL36763.1| MYB domain class transcription factor [Malus x domestica]
          Length = 360

 Score =  239 bits (610), Expect = 2e-61
 Identities = 114/137 (83%), Positives = 124/137 (90%)
 Frame = -2

Query: 413 NGYASGKMDTDSCGQSKLCSRGHWRPAEDSRLKDLVALYGPQNWNLIAEKLEGRSGKSCR 234
           +G    + +T+S GQSKLC+RGHWRPAEDS+LK+LVALYGPQNWNLIAEKLEGRSGKSCR
Sbjct: 18  SGGKVSEKETES-GQSKLCARGHWRPAEDSKLKELVALYGPQNWNLIAEKLEGRSGKSCR 76

Query: 233 LRWFNQLDPRINRRAFNXXXXERLMAAHRLYGNKWALIARLFPGRTDNAVKNHWHVIMAR 54
           LRWFNQLDPRINRRAF     ERLM AHR+YGNKWA+IARLFPGRTDNAVKNHWHVIMAR
Sbjct: 77  LRWFNQLDPRINRRAFTEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMAR 136

Query: 53  KYREQSSAYRRRKMGQT 3
           KYREQSSAYRRRK+ QT
Sbjct: 137 KYREQSSAYRRRKLNQT 153


>ref|XP_002269342.2| PREDICTED: uncharacterized protein LOC100253313 [Vitis vinifera]
          Length = 432

 Score =  238 bits (606), Expect = 5e-61
 Identities = 115/133 (86%), Positives = 124/133 (93%)
 Frame = -2

Query: 401 SGKMDTDSCGQSKLCSRGHWRPAEDSRLKDLVALYGPQNWNLIAEKLEGRSGKSCRLRWF 222
           SGK +TDS G SKLC+RGHWRPAED++LK+LVALYGPQNWNLIAEKLEGRSGKSCRLRWF
Sbjct: 124 SGK-ETDS-GHSKLCARGHWRPAEDTKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWF 181

Query: 221 NQLDPRINRRAFNXXXXERLMAAHRLYGNKWALIARLFPGRTDNAVKNHWHVIMARKYRE 42
           NQLDPRINRRAF+    ERLM AHRLYGNKWA+IARLFPGRTDNAVKNHWHVIMARKYRE
Sbjct: 182 NQLDPRINRRAFSEEEEERLMDAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYRE 241

Query: 41  QSSAYRRRKMGQT 3
           QSSAYRRRK+ Q+
Sbjct: 242 QSSAYRRRKLSQS 254


Top