BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029457
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containi...   129   2e-28
ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containi...   126   2e-27
ref|XP_003601696.1| Pentatricopeptide repeat-containing protein ...   125   4e-27
ref|XP_002298671.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26
ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   117   8e-25

>ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Vitis vinifera]
          Length = 610

 Score =  129 bits (325), Expect = 2e-28
 Identities = 62/86 (72%), Positives = 74/86 (86%)
 Frame = -3

Query: 258 EPKDNSTCILLSNVYAGAAMWENVSKVRRLMIDMDIKKEPGYSCIDLGKENQVFYAGETN 79
           +P+D ST ILLSN+YA AAMWE+VSKVRRLM  M++KKEPGYSCI LGKE+QVF AGET+
Sbjct: 437 KPEDPSTYILLSNIYASAAMWESVSKVRRLMAAMEVKKEPGYSCIVLGKESQVFLAGETS 496

Query: 78  HIMKDEILVLLTELDAEMRRRGYVPD 1
           H  K+EI  LL ELDAEM++RGY+PD
Sbjct: 497 HPAKEEIFGLLEELDAEMKKRGYIPD 522


>ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Glycine max]
          Length = 611

 Score =  126 bits (317), Expect = 2e-27
 Identities = 58/86 (67%), Positives = 73/86 (84%)
 Frame = -3

Query: 258 EPKDNSTCILLSNVYAGAAMWENVSKVRRLMIDMDIKKEPGYSCIDLGKENQVFYAGETN 79
           +P+D S+ ILLSN+YAGA MWE+VSKVR+LM+ ++ KK PGYSCIDLGK + VFYAGET+
Sbjct: 438 KPEDPSSYILLSNIYAGAGMWEDVSKVRKLMMTLEAKKAPGYSCIDLGKGSHVFYAGETS 497

Query: 78  HIMKDEILVLLTELDAEMRRRGYVPD 1
           H M+DEI+ L+ ELD EMR+RGY PD
Sbjct: 498 HPMRDEIIGLMRELDEEMRKRGYAPD 523


>ref|XP_003601696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355490744|gb|AES71947.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 616

 Score =  125 bits (314), Expect = 4e-27
 Identities = 59/86 (68%), Positives = 73/86 (84%)
 Frame = -3

Query: 258 EPKDNSTCILLSNVYAGAAMWENVSKVRRLMIDMDIKKEPGYSCIDLGKENQVFYAGETN 79
           +P+D S+ ILLSN+YAGA MWENVS VR+LM   ++KK PGYSC+DLG+E QVF+AGE +
Sbjct: 443 KPEDPSSYILLSNIYAGAGMWENVSMVRKLMAVKEVKKVPGYSCVDLGREFQVFHAGEAS 502

Query: 78  HIMKDEILVLLTELDAEMRRRGYVPD 1
             MKDEIL L+T+LD+EMRRRGYVPD
Sbjct: 503 QPMKDEILGLMTKLDSEMRRRGYVPD 528


>ref|XP_002298671.1| predicted protein [Populus trichocarpa] gi|222845929|gb|EEE83476.1|
           predicted protein [Populus trichocarpa]
          Length = 609

 Score =  124 bits (310), Expect = 1e-26
 Identities = 58/81 (71%), Positives = 70/81 (86%)
 Frame = -3

Query: 243 STCILLSNVYAGAAMWENVSKVRRLMIDMDIKKEPGYSCIDLGKENQVFYAGETNHIMKD 64
           ST +LLSNVYAGA  WE +S+VR+LM DM++K++PGYS IDLGKE+QVF+AGET H MKD
Sbjct: 441 STYVLLSNVYAGAGKWEQMSRVRKLMTDMEVKRKPGYSSIDLGKESQVFHAGETCHPMKD 500

Query: 63  EILVLLTELDAEMRRRGYVPD 1
           EI  LL ELDAEMR+RGY+PD
Sbjct: 501 EIFGLLKELDAEMRKRGYIPD 521


>ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g14050, mitochondrial-like [Cucumis sativus]
          Length = 611

 Score =  117 bits (294), Expect = 8e-25
 Identities = 58/87 (66%), Positives = 74/87 (85%), Gaps = 1/87 (1%)
 Frame = -3

Query: 258 EPKDNSTCILLSNVYAGAAMWENVSKVRRLMIDMDIKKEPGYSCIDLGKENQVFYAGET- 82
           +P+D ST ILLSNVYAGA MW +VSKVR+LM  M+++KEPGYS ID GK++QVF+AGE+ 
Sbjct: 437 KPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFGKDSQVFHAGESC 496

Query: 81  NHIMKDEILVLLTELDAEMRRRGYVPD 1
           +H MK+EI  LL +LDAEMR+RGYVP+
Sbjct: 497 DHPMKNEICNLLKDLDAEMRKRGYVPN 523