BLASTX nr result

ID: Bupleurum21_contig00029453 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029453
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36169.1| unknown [Lotus japonicus]                               67   1e-09
emb|CBI15151.3| unnamed protein product [Vitis vinifera]               67   1e-09
ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor...    67   1e-09
ref|XP_002522713.1| ATP-dependent RNA helicase, putative [Ricinu...    66   3e-09
ref|XP_003532351.1| PREDICTED: LOW QUALITY PROTEIN: putative pre...    65   4e-09

>gb|AFK36169.1| unknown [Lotus japonicus]
          Length = 194

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/36 (86%), Positives = 34/36 (94%)
 Frame = -1

Query: 110 LNHPQTVHIHPSLGLAQVVLPRWVVYHELVLTTKEY 3
           + HPQTVHIHPSLGLAQ+ LPRWVVY+ELVLTTKEY
Sbjct: 119 VKHPQTVHIHPSLGLAQI-LPRWVVYYELVLTTKEY 153


>emb|CBI15151.3| unnamed protein product [Vitis vinifera]
          Length = 954

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/36 (86%), Positives = 33/36 (91%)
 Frame = -1

Query: 110 LNHPQTVHIHPSLGLAQVVLPRWVVYHELVLTTKEY 3
           + HPQTVHIHPS GLAQV LPRWV+YHELVLTTKEY
Sbjct: 877 VKHPQTVHIHPSSGLAQV-LPRWVIYHELVLTTKEY 911


>ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
            helicase DHX16-like [Vitis vinifera]
          Length = 1056

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/36 (86%), Positives = 33/36 (91%)
 Frame = -1

Query: 110  LNHPQTVHIHPSLGLAQVVLPRWVVYHELVLTTKEY 3
            + HPQTVHIHPS GLAQV LPRWV+YHELVLTTKEY
Sbjct: 979  VKHPQTVHIHPSSGLAQV-LPRWVIYHELVLTTKEY 1013


>ref|XP_002522713.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223538063|gb|EEF39675.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 756

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 30/36 (83%), Positives = 33/36 (91%)
 Frame = -1

Query: 110 LNHPQTVHIHPSLGLAQVVLPRWVVYHELVLTTKEY 3
           + HPQTVHIHPS GL+QV LPRWV+YHELVLTTKEY
Sbjct: 702 VKHPQTVHIHPSSGLSQV-LPRWVIYHELVLTTKEY 736


>ref|XP_003532351.1| PREDICTED: LOW QUALITY PROTEIN: putative pre-mRNA-splicing factor
           ATP-dependent RNA helicase DHX16-like [Glycine max]
          Length = 704

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 31/36 (86%), Positives = 33/36 (91%)
 Frame = -1

Query: 110 LNHPQTVHIHPSLGLAQVVLPRWVVYHELVLTTKEY 3
           + H QTVHIHPSLGLAQV LPRWVVYHELVL+TKEY
Sbjct: 629 VKHSQTVHIHPSLGLAQV-LPRWVVYHELVLSTKEY 663


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