BLASTX nr result

ID: Bupleurum21_contig00029436 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029436
         (1426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271312.1| PREDICTED: squamosa promoter-binding-like pr...   379   e-103
ref|XP_002514905.1| LIGULELESS1 protein, putative [Ricinus commu...   320   8e-85
emb|CBI27664.3| unnamed protein product [Vitis vinifera]              305   2e-80
emb|CAN77427.1| hypothetical protein VITISV_001736 [Vitis vinifera]   293   8e-77
ref|XP_002267224.2| PREDICTED: LOW QUALITY PROTEIN: promoter-bin...   283   8e-74

>ref|XP_002271312.1| PREDICTED: squamosa promoter-binding-like protein 12-like [Vitis
            vinifera]
          Length = 477

 Score =  379 bits (974), Expect = e-103
 Identities = 222/470 (47%), Positives = 286/470 (60%), Gaps = 31/470 (6%)
 Frame = -1

Query: 1408 MEWNTK----WDWET-----------SKKLEMTDWGVE-EGNIEVGSFHVYGT---NGVP 1286
            MEWN K    WDWE             KKL+ +DW +E EG I+ GSF+  G    +G  
Sbjct: 7    MEWNAKAPVQWDWENLDIFNAKSTEIPKKLQ-SDWEIEGEGGIDTGSFYSSGCGAGSGGS 65

Query: 1285 ASNICHXXXXXXXXXXXXXXXSKESGKASNLTFDPFGGYSLDFSKKNDCGSVNTITASPS 1106
             S++ H               SK   K SN TF+ F  +S DF+KK D        +SP+
Sbjct: 66   GSDLGHAYSSKSSKSASIDSSSKVGIKTSNFTFEAFQDFSQDFNKKRDLERAEPTGSSPN 125

Query: 1105 MDTSVGSAELSIGLKLGKRTYFENCPAENKSKTSSSSNIPVPLASTAKKTRPPCQNVPTP 926
            ++ S+GS E  IGLKLGKRTYFE+  A   +K S  S IP+   +TAK++R  CQN    
Sbjct: 126  LEASIGSGEPLIGLKLGKRTYFEDVSAGANAKGSVFSVIPISSDTTAKRSRLSCQNAHVS 185

Query: 925  RCQVEACNLDLSSVKDYHRKHRVCDSHSKCSKVVIGGLERRFCQQCSRFHSLSEFDGKKR 746
            RCQVE CNLDLS+ KDYHRKHRVC+SH+KC KV++GGLERRFCQQCSRFHSLSEFD KKR
Sbjct: 186  RCQVEGCNLDLSTAKDYHRKHRVCESHTKCPKVIVGGLERRFCQQCSRFHSLSEFDEKKR 245

Query: 745  SCRKRLFDHNARRRKPQHETIHFKSTNMSSIYEGSRQMCF----APISHSRPAGASTWE- 581
            SCR+RL DHNARRRKPQ E I   S  +SS Y G +QM       PI H+RPA   +WE 
Sbjct: 246  SCRRRLSDHNARRRKPQPEGIQSNSARLSSFYGGKQQMSLVLSSVPIVHTRPAVNPSWEG 305

Query: 580  --SISTLATGHLRKADISDGTNVQSHLQGSWLPHAISMPAQNSSRLLQYRGS-SEGCNQG 410
              S  T   G +R  + + G + Q HL GS L + IS    +SSRLL  +G+ +E  NQG
Sbjct: 306  TCSKFTQTKGLVRPGN-TGGIDRQLHLPGSELQNGISTLCHDSSRLLHSKGAIAEVLNQG 364

Query: 409  VTESIFSANLDTASDLHRALSLLSTDSQGSCDQQSVNPNYSMNATYKNISPRMMHAVPQS 230
            + +S+ S+NLDT+ DL RALSLLST+S GSC+ Q +  ++ M+    ++   +MHAV Q 
Sbjct: 365  LGDSMISSNLDTSQDLRRALSLLSTNSWGSCETQPIPSDHPMHVNQTSMPQSIMHAVSQG 424

Query: 229  LPFDSSECWQTENTPTD----ILVPNITCGSNYEEIQLFSAPYGNGFFSG 92
            +   +SE W+TE   TD    IL       ++++E +LF APY +GF SG
Sbjct: 425  MLHSTSEHWRTELPSTDSRVHILPSQGDGNTHFQEFKLFKAPYESGFSSG 474


>ref|XP_002514905.1| LIGULELESS1 protein, putative [Ricinus communis]
            gi|223545956|gb|EEF47459.1| LIGULELESS1 protein, putative
            [Ricinus communis]
          Length = 483

 Score =  320 bits (819), Expect = 8e-85
 Identities = 202/481 (41%), Positives = 265/481 (55%), Gaps = 37/481 (7%)
 Frame = -1

Query: 1426 MNPSATMEWNTK----WDWET----------SKKLEMTDWGVE-EGNIEVGSFHVYGT-- 1298
            M+  + MEWNTK    WDWE            KKL +T+W ++ E  I+ GS +  G+  
Sbjct: 1    MSSLSLMEWNTKPPIQWDWENLIMFNTTTENPKKLRVTEWEIDGEKGIDSGSIYSSGSGS 60

Query: 1297 ---NGVPASNICHXXXXXXXXXXXXXXXSKESGKASNLTFDPFGGYSLDFSKKNDCGSVN 1127
               +G   S++                 S    K SN TF+       DF+ K    +  
Sbjct: 61   GSGSGGSGSDLGLASLSKSSKSASINSSSIGEVKTSNFTFEASEATE-DFNNKKAFTAKP 119

Query: 1126 TITASPSMDTSVGSAELSIGLKLGKRTYFEN-CPAENKSKTSSSSNIPVPLASTAKKTRP 950
            T T+S +++ SVGS E  +GLKLGKRTYFE+ C   N   +S SS IP    S  K+++ 
Sbjct: 120  TGTSS-TIEASVGSGEPLLGLKLGKRTYFEDVCAGSNIKSSSFSSAIPGSSISPPKRSKS 178

Query: 949  PCQNVPTPRCQVEACNLDLSSVKDYHRKHRVCDSHSKCSKVVIGGLERRFCQQCSRFHSL 770
              Q   TPRCQVE CNLDLSS KDYHRKHRVC++HSKC KV++ GLERRFCQQCSRFH L
Sbjct: 179  SSQASSTPRCQVEGCNLDLSSAKDYHRKHRVCENHSKCPKVIVAGLERRFCQQCSRFHGL 238

Query: 769  SEFDGKKRSCRKRLFDHNARRRKPQHETIHFKSTNM-SSIYEGSRQMCF----APISHSR 605
            SEFD KKRSCR+RL DHNARRRKPQ E+I   S  + SS Y+    M      AP+ H+R
Sbjct: 239  SEFDEKKRSCRRRLSDHNARRRKPQPESIQMNSARLSSSSYDERPHMSLVWNRAPLVHAR 298

Query: 604  PAGASTWESIS----TLATGHLRKADISDGTNVQSHLQGSWLPHAISMPAQNSSRLLQYR 437
                  WE  S    T+   ++ K     G + Q HL  + L  +I +   N   LL  +
Sbjct: 299  ANANLAWEGTSSSKFTITKEYVLKPAKIGGIDGQLHLPANELTTSIPLHPHNCKSLLPSK 358

Query: 436  GS---SEGCNQGVTESIFSANLDTASDLHRALSLLSTDSQGSCDQQSVNPNYSMNATYKN 266
                 +E  NQ + ESI S+N+D   DLHRALSLLST+S GSC+ +S +       ++  
Sbjct: 359  AKVPIAEVLNQDLEESIISSNVDATQDLHRALSLLSTNSWGSCEPKSFSHERPAQLSHTG 418

Query: 265  ISPRMMHAVPQSLPFDSSECWQTENTPTDILVPNIT----CGSNYEEIQLFSAPYGNGFF 98
            +   ++HAVPQ LP  SS+ W+ E   T+  V  +T      S ++E QL  APY N F+
Sbjct: 419  MPQSVLHAVPQGLPLTSSDYWRAEQHITNSRVHTLTSQNDSSSYFQEFQLLRAPYDNDFY 478

Query: 97   S 95
            S
Sbjct: 479  S 479


>emb|CBI27664.3| unnamed protein product [Vitis vinifera]
          Length = 418

 Score =  305 bits (781), Expect = 2e-80
 Identities = 199/467 (42%), Positives = 258/467 (55%), Gaps = 28/467 (5%)
 Frame = -1

Query: 1408 MEWNTK----WDWET-----------SKKLEMTDWGVE-EGNIEVGSFHVYGTNGVPASN 1277
            MEWN K    WDWE             KKL+ +DW +E EG I+ GSF+  G        
Sbjct: 7    MEWNAKAPVQWDWENLDIFNAKSTEIPKKLQ-SDWEIEGEGGIDTGSFYSSGCGA----- 60

Query: 1276 ICHXXXXXXXXXXXXXXXSKESGKASNLTFDPFGGYSLDFSKKNDCGSVNTITASPSMDT 1097
                                  G  S+L       YS   SK            S S+D+
Sbjct: 61   -------------------GSGGSGSDLGH----AYSSKSSK------------SASIDS 85

Query: 1096 SVGSAELSIGLKLGKRTYFENCPAENKSKTSSSSNIPVPLASTAKKTRPPCQNVPTPRCQ 917
            S   +++  GL+               +K S  S IP+   +TAK++R  CQN    RCQ
Sbjct: 86   S---SKIWRGLRAN-------------AKGSVFSVIPISSDTTAKRSRLSCQNAHVSRCQ 129

Query: 916  VEACNLDLSSVKDYHRKHRVCDSHSKCSKVVIGGLERRFCQQCSRFHSLSEFDGKKRSCR 737
            VE CNLDLS+ KDYHRKHRVC+SH+KC KV++GGLERRFCQQCSRFHSLSEFD KKRSCR
Sbjct: 130  VEGCNLDLSTAKDYHRKHRVCESHTKCPKVIVGGLERRFCQQCSRFHSLSEFDEKKRSCR 189

Query: 736  KRLFDHNARRRKPQHETIHFKSTNMSSIYEGSRQMCF----APISHSRPAGASTWE---S 578
            +RL DHNARRRKPQ E I   S  +SS Y G +QM       PI H+RPA   +WE   S
Sbjct: 190  RRLSDHNARRRKPQPEGIQSNSARLSSFYGGKQQMSLVLSSVPIVHTRPAVNPSWEGTCS 249

Query: 577  ISTLATGHLRKADISDGTNVQSHLQGSWLPHAISMPAQNSSRLLQYRGS-SEGCNQGVTE 401
              T   G +R  + + G + Q HL GS L + IS    +SSRLL  +G+ +E  NQG+ +
Sbjct: 250  KFTQTKGLVRPGN-TGGIDRQLHLPGSELQNGISTLCHDSSRLLHSKGAIAEVLNQGLGD 308

Query: 400  SIFSANLDTASDLHRALSLLSTDSQGSCDQQSVNPNYSMNATYKNISPRMMHAVPQSLPF 221
            S+ S+NLDT+ DL RALSLLST+S GSC+ Q +  ++ M+    ++   +MHAV Q +  
Sbjct: 309  SMISSNLDTSQDLRRALSLLSTNSWGSCETQPIPSDHPMHVNQTSMPQSIMHAVSQGMLH 368

Query: 220  DSSECWQTENTPTD----ILVPNITCGSNYEEIQLFSAPYGNGFFSG 92
             +SE W+TE   TD    IL       ++++E +LF APY +GF SG
Sbjct: 369  STSEHWRTELPSTDSRVHILPSQGDGNTHFQEFKLFKAPYESGFSSG 415


>emb|CAN77427.1| hypothetical protein VITISV_001736 [Vitis vinifera]
          Length = 496

 Score =  293 bits (750), Expect = 8e-77
 Identities = 190/455 (41%), Positives = 242/455 (53%), Gaps = 22/455 (4%)
 Frame = -1

Query: 1390 WDWET-----------SKKLEMTDWGVE-EGNIEVGSFHVYGT---NGVPASNICHXXXX 1256
            WDWE             KKL+ +DW +E EG I+ GSF+  G    +G   S++ H    
Sbjct: 74   WDWENLDIFNAKSTEIPKKLQ-SDWEIEGEGGIDTGSFYSSGCGAGSGGSGSDLGHAYSS 132

Query: 1255 XXXXXXXXXXXSKESGKASNLTFDPFGGYSLDFSKKNDCGSVNTITASPSMDTSVGSAEL 1076
                       SK   K SN TF+ F  +S DF+KK D        +SP+++ S+GS E 
Sbjct: 133  KSSKSASIDSSSKVGIKTSNFTFEAFQDFSQDFNKKRDLERAEPTGSSPNLEASIGSGEP 192

Query: 1075 SIGLKLGKRTYFENCPAENKSKTSSSSNIPVPLASTAKKTRPPCQNVPTPRCQVEACNLD 896
             IGLKLGKRTYFE+  A   +K S  S IP+   +TAK++R  CQN    RCQVE CNLD
Sbjct: 193  LIGLKLGKRTYFEDVSAGGNAKGSVFSVIPISSDTTAKRSRLSCQNAHVSRCQVEGCNLD 252

Query: 895  LSSVKDYHRKHRVCDSHSKCSKVVIGGLERRFCQQCSRFHSLSEFDGKKRSCRKRLFDHN 716
            LS+ KDYHRKHRVC+SH+KC KV++GGLERRFCQQCSRFHSLSEFD KKRSCR+RL DHN
Sbjct: 253  LSTAKDYHRKHRVCESHTKCPKVIVGGLERRFCQQCSRFHSLSEFDEKKRSCRRRLSDHN 312

Query: 715  ARRRKPQHETIHFKSTNMSSIYEGSRQMCF----APISHSRPAGASTWE---SISTLATG 557
            ARRRKPQ E I   S  +SS Y G +QM       PI H+RPA   +WE   S  T   G
Sbjct: 313  ARRRKPQPEGIQSNSARLSSFYGGKQQMSLVLSSVPIVHTRPAVNPSWEGTCSKFTQTKG 372

Query: 556  HLRKADISDGTNVQSHLQGSWLPHAISMPAQNSSRLLQYRGSSEGCNQGVTESIFSANLD 377
             +R  + + G + Q HL GS L + IS    +SSRLL     S+G    V   +    L 
Sbjct: 373  LVRPGN-TGGIDRQLHLPGSELQNGISTLCHDSSRLLH----SKGAIAEVLNQVSQGMLH 427

Query: 376  TASDLHRALSLLSTDSQGSCDQQSVNPNYSMNATYKNISPRMMHAVPQSLPFDSSECWQT 197
            + S+ H    L STDS+                         +H +P           Q 
Sbjct: 428  STSE-HWRTELPSTDSR-------------------------VHILPS----------QG 451

Query: 196  ENTPTDILVPNITCGSNYEEIQLFSAPYGNGFFSG 92
            +              ++++E +LF APY +GF SG
Sbjct: 452  DG------------NTHFQEFKLFKAPYESGFSSG 474


>ref|XP_002267224.2| PREDICTED: LOW QUALITY PROTEIN: promoter-binding protein SPL10 [Vitis
            vinifera]
          Length = 506

 Score =  283 bits (724), Expect = 8e-74
 Identities = 172/434 (39%), Positives = 240/434 (55%), Gaps = 22/434 (5%)
 Frame = -1

Query: 1414 ATMEWN----TKWDWETSK-----------KLEMTDWGVE-EGNIEVGSFHVYGTNGVPA 1283
            + MEWN    ++WDWET             ++++++  +E +G ++ GS +  G  G   
Sbjct: 5    SVMEWNLRTPSEWDWETLTAFNTKAFEFPGRVQLSNHDIEVDGGVDNGSVYSSGGGGFSG 64

Query: 1282 SNICHXXXXXXXXXXXXXXXSKESGKASNLTFDPFGGYSLDFSKKNDCGSVNTITASPSM 1103
            S++ H                KE  K      D    +  DFS+  +   V +    P++
Sbjct: 65   SDLGHGSSSRSSISVSGDSSLKEGIKKFRNVED----FHKDFSENKELIRVGSSGNCPTV 120

Query: 1102 DTSVGSAELSIGLKLGKRTYFENCPAENKSKTSSSSNIPVPLASTAKKTRPPCQNVPTPR 923
             TS GS E  IGLKLGKRTYFE+  A + +KT++SS  P    S  K+ R   Q+  TPR
Sbjct: 121  GTSDGSGEAMIGLKLGKRTYFEDVCAASTAKTTTSSVNPASSVSATKRFRTSYQSSQTPR 180

Query: 922  CQVEACNLDLSSVKDYHRKHRVCDSHSKCSKVVIGGLERRFCQQCSRFHSLSEFDGKKRS 743
            CQVE CNLDL S KDYHR+HR+C++HSK  KV++ GLERRFCQQCSRFH L+EFD KKRS
Sbjct: 181  CQVEGCNLDLKSAKDYHRRHRICENHSKSPKVIVAGLERRFCQQCSRFHELTEFDDKKRS 240

Query: 742  CRKRLFDHNARRRKPQHETIHFKSTNM-SSIYEGSRQMCFA----PISHSRPAGASTWES 578
            CR+RL DHNARRR+P  E+I F S  + SS+Y+G +Q+  A    PI  + P   +    
Sbjct: 241  CRRRLNDHNARRRRPHPESIQFSSGRLPSSLYDGRQQINLACNRLPIPVATPMWQNPCSF 300

Query: 577  ISTLATGHLRKADISDGTNVQSHLQGSWLPHAISMPAQNSSRLLQYRGSS-EGCNQGVTE 401
              T   G L +   + G + Q HL    +P AISM   NS R+L + GS+    NQG+  
Sbjct: 301  KDTQTGGSLIRPVKAVGIDKQLHLPTDEMPDAISMLHGNSERMLSFDGSTPRVLNQGLEA 360

Query: 400  SIFSANLDTASDLHRALSLLSTDSQGSCDQQSVNPNYSMNATYKNISPRMMHAVPQSLPF 221
            S  ++N + A D  RALSLLST+S G  D    + +  M+    +++   MHA P +   
Sbjct: 361  SAIASNSNVAPDFRRALSLLSTNSWGLNDPGPTSLDQLMHVNQTSMAQPTMHAEPHNWAL 420

Query: 220  DSSECWQTENTPTD 179
             SSE    + TP++
Sbjct: 421  ASSENMHVQQTPSE 434


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