BLASTX nr result

ID: Bupleurum21_contig00029402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029402
         (643 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP45157.2| hypothetical protein SBB1_21t00001 [Solanum bulbo...   241   1e-61
gb|AAP45172.2| hypothetical protein SBB1_14t00021 [Solanum bulbo...   237   2e-60
ref|XP_002270427.2| PREDICTED: uncharacterized protein LOC100259...   208   6e-52
emb|CBI26466.3| unnamed protein product [Vitis vinifera]              208   6e-52
ref|XP_004151910.1| PREDICTED: growth-regulating factor 3-like [...   196   4e-48

>gb|AAP45157.2| hypothetical protein SBB1_21t00001 [Solanum bulbocastanum]
          Length = 445

 Score =  241 bits (614), Expect = 1e-61
 Identities = 111/145 (76%), Positives = 120/145 (82%)
 Frame = +3

Query: 207 GFRPPFTAVQWQELEHQALIYKYLMAGLPVPPELVVPIRRSLEALPSRFFHHSALGYCSY 386
           G+RPPFTAVQWQELEHQA+IYKYL+AGLPVPP+LVVPIRRS EA+ +RFFHH +LGYCSY
Sbjct: 26  GYRPPFTAVQWQELEHQAMIYKYLVAGLPVPPDLVVPIRRSFEAISARFFHHPSLGYCSY 85

Query: 387 YGKKFDPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVEXXXXXXXXXXX 566
           YGKKFDPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVE           
Sbjct: 86  YGKKFDPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVESQSTSQSLSTS 145

Query: 567 XXXKFCGSSATGESFQSRGSGSFQN 641
                 GSS T E FQ+  SG+FQN
Sbjct: 146 MSQITTGSSNTKERFQNSSSGTFQN 170


>gb|AAP45172.2| hypothetical protein SBB1_14t00021 [Solanum bulbocastanum]
          Length = 552

 Score =  237 bits (604), Expect = 2e-60
 Identities = 110/145 (75%), Positives = 119/145 (82%)
 Frame = +3

Query: 207 GFRPPFTAVQWQELEHQALIYKYLMAGLPVPPELVVPIRRSLEALPSRFFHHSALGYCSY 386
           G+RPPFTAVQWQELEHQA+IYKYL+AGLPVPP+LVVPIRRS EA+ +RFFHH +LGYCSY
Sbjct: 26  GYRPPFTAVQWQELEHQAMIYKYLVAGLPVPPDLVVPIRRSFEAISARFFHHPSLGYCSY 85

Query: 387 YGKKFDPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVEXXXXXXXXXXX 566
           YGKKFDPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVE           
Sbjct: 86  YGKKFDPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVESQSTSQSLSTS 145

Query: 567 XXXKFCGSSATGESFQSRGSGSFQN 641
                 GSS T  SFQ+  S +FQN
Sbjct: 146 MSQITTGSSNTKGSFQNSSSRTFQN 170


>ref|XP_002270427.2| PREDICTED: uncharacterized protein LOC100259737 [Vitis vinifera]
          Length = 330

 Score =  208 bits (530), Expect = 6e-52
 Identities = 96/141 (68%), Positives = 108/141 (76%)
 Frame = +3

Query: 219 PFTAVQWQELEHQALIYKYLMAGLPVPPELVVPIRRSLEALPSRFFHHSALGYCSYYGKK 398
           PFT  QWQELEHQALI+KYLMAGLPVPP+LV+PI++S E++ SRFFHH  +GYCS+YGKK
Sbjct: 23  PFTVSQWQELEHQALIFKYLMAGLPVPPDLVLPIQKSFESMSSRFFHHPTMGYCSFYGKK 82

Query: 399 FDPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVEXXXXXXXXXXXXXXK 578
            DPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVE               
Sbjct: 83  VDPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVESQTTTQSSSTVTSLT 142

Query: 579 FCGSSATGESFQSRGSGSFQN 641
             G S +       G+G+FQN
Sbjct: 143 VTGGSGS-------GAGTFQN 156


>emb|CBI26466.3| unnamed protein product [Vitis vinifera]
          Length = 373

 Score =  208 bits (530), Expect = 6e-52
 Identities = 96/141 (68%), Positives = 108/141 (76%)
 Frame = +3

Query: 219 PFTAVQWQELEHQALIYKYLMAGLPVPPELVVPIRRSLEALPSRFFHHSALGYCSYYGKK 398
           PFT  QWQELEHQALI+KYLMAGLPVPP+LV+PI++S E++ SRFFHH  +GYCS+YGKK
Sbjct: 66  PFTVSQWQELEHQALIFKYLMAGLPVPPDLVLPIQKSFESMSSRFFHHPTMGYCSFYGKK 125

Query: 399 FDPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVEXXXXXXXXXXXXXXK 578
            DPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVE               
Sbjct: 126 VDPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVESQTTTQSSSTVTSLT 185

Query: 579 FCGSSATGESFQSRGSGSFQN 641
             G S +       G+G+FQN
Sbjct: 186 VTGGSGS-------GAGTFQN 199


>ref|XP_004151910.1| PREDICTED: growth-regulating factor 3-like [Cucumis sativus]
           gi|449484096|ref|XP_004156783.1| PREDICTED:
           growth-regulating factor 3-like [Cucumis sativus]
          Length = 336

 Score =  196 bits (497), Expect = 4e-48
 Identities = 89/130 (68%), Positives = 101/130 (77%)
 Frame = +3

Query: 213 RPPFTAVQWQELEHQALIYKYLMAGLPVPPELVVPIRRSLEALPSRFFHHSALGYCSYYG 392
           R PFT +QWQELE QALI+K++MAG PVPPELV+ I++S E++  RFFHH  + YCS+YG
Sbjct: 29  RSPFTVLQWQELELQALIFKFMMAGQPVPPELVLLIQKSFESISHRFFHHPTMAYCSFYG 88

Query: 393 KKFDPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVEXXXXXXXXXXXXX 572
           KK DPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVE             
Sbjct: 89  KKVDPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVESQTMTQSSSTVTS 148

Query: 573 XKFCGSSATG 602
               GSS+TG
Sbjct: 149 LTATGSSSTG 158


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