BLASTX nr result

ID: Bupleurum21_contig00029399 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029399
         (640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631625.1| PREDICTED: probable E3 ubiquitin-protein lig...   207   2e-51
ref|XP_002284665.1| PREDICTED: probable E3 ubiquitin-protein lig...   207   2e-51
emb|CAN75679.1| hypothetical protein VITISV_033054 [Vitis vinifera]   207   2e-51
ref|XP_002519105.1| Protein ariadne-1, putative [Ricinus communi...   192   3e-47
ref|XP_004145339.1| PREDICTED: probable E3 ubiquitin-protein lig...   187   1e-45

>ref|XP_003631625.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI1 isoform 2
           [Vitis vinifera]
          Length = 573

 Score =  207 bits (526), Expect = 2e-51
 Identities = 113/196 (57%), Positives = 136/196 (69%), Gaps = 2/196 (1%)
 Frame = -1

Query: 640 KAHKDSYTQESKLXXXXXXXXXXXXXRFSNY-DFSWVTNGLYRLFRSRCALTYSYPFAFY 464
           KAH DS+  ESKL             + S   DFSWVTNGLYRLFRSR  L+YSYPFAFY
Sbjct: 339 KAHTDSFKLESKLKDTIKVKVSNSEEKESTLRDFSWVTNGLYRLFRSRRVLSYSYPFAFY 398

Query: 463 MFGDYLFNYDMTKEERERKXXXXXXXXXXXEANVERLSQFIEEPFHEFDEEHLMKSRMQI 284
           MFGD LFN +MTKEERE K           EANVE+LS+FIEEPF +++E+ +   RMQ+
Sbjct: 399 MFGDDLFNDEMTKEEREIKQHLFEDQQQQLEANVEKLSKFIEEPFDQYEEDKVRDIRMQV 458

Query: 283 INLCVLTDNLCKSMYECIENDLLGSLQSGIHSIAPYNSKGIVKATELFVCPTAEASIANE 104
           INL V+TD LCK MYECIENDLLGSLQ GIH+IAPY SKGI +A+EL  C + +AS  N 
Sbjct: 459 INLSVITDTLCKKMYECIENDLLGSLQHGIHNIAPYKSKGIERASELITCQSNKAS--NA 516

Query: 103 DDEPNNDH-IDGKVVE 59
           D+ P++++  DG   E
Sbjct: 517 DNCPSSENGTDGGTAE 532


>ref|XP_002284665.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI1 isoform 1
           [Vitis vinifera] gi|297741410|emb|CBI32541.3| unnamed
           protein product [Vitis vinifera]
          Length = 589

 Score =  207 bits (526), Expect = 2e-51
 Identities = 113/196 (57%), Positives = 136/196 (69%), Gaps = 2/196 (1%)
 Frame = -1

Query: 640 KAHKDSYTQESKLXXXXXXXXXXXXXRFSNY-DFSWVTNGLYRLFRSRCALTYSYPFAFY 464
           KAH DS+  ESKL             + S   DFSWVTNGLYRLFRSR  L+YSYPFAFY
Sbjct: 355 KAHTDSFKLESKLKDTIKVKVSNSEEKESTLRDFSWVTNGLYRLFRSRRVLSYSYPFAFY 414

Query: 463 MFGDYLFNYDMTKEERERKXXXXXXXXXXXEANVERLSQFIEEPFHEFDEEHLMKSRMQI 284
           MFGD LFN +MTKEERE K           EANVE+LS+FIEEPF +++E+ +   RMQ+
Sbjct: 415 MFGDDLFNDEMTKEEREIKQHLFEDQQQQLEANVEKLSKFIEEPFDQYEEDKVRDIRMQV 474

Query: 283 INLCVLTDNLCKSMYECIENDLLGSLQSGIHSIAPYNSKGIVKATELFVCPTAEASIANE 104
           INL V+TD LCK MYECIENDLLGSLQ GIH+IAPY SKGI +A+EL  C + +AS  N 
Sbjct: 475 INLSVITDTLCKKMYECIENDLLGSLQHGIHNIAPYKSKGIERASELITCQSNKAS--NA 532

Query: 103 DDEPNNDH-IDGKVVE 59
           D+ P++++  DG   E
Sbjct: 533 DNCPSSENGTDGGTAE 548


>emb|CAN75679.1| hypothetical protein VITISV_033054 [Vitis vinifera]
          Length = 788

 Score =  207 bits (526), Expect = 2e-51
 Identities = 114/196 (58%), Positives = 137/196 (69%), Gaps = 2/196 (1%)
 Frame = -1

Query: 640  KAHKDSYTQESKLXXXXXXXXXXXXXRFSNY-DFSWVTNGLYRLFRSRCALTYSYPFAFY 464
            KAH DS+  ESKL             + S   DFSWVTNGLYRLFRSR  L+YSYPFAFY
Sbjct: 554  KAHTDSFKLESKLKDTIKXKVSNSEEKESTLRDFSWVTNGLYRLFRSRRVLSYSYPFAFY 613

Query: 463  MFGDYLFNYDMTKEERERKXXXXXXXXXXXEANVERLSQFIEEPFHEFDEEHLMKSRMQI 284
            MFGD LFN +MTKEERE K           EANVE+LS+FIEEPF +++E+ +   RMQ+
Sbjct: 614  MFGDDLFNDEMTKEEREIKQHLFEDQQQQLEANVEKLSKFIEEPFDQYEEDKVRDIRMQV 673

Query: 283  INLCVLTDNLCKSMYECIENDLLGSLQSGIHSIAPYNSKGIVKATELFVCPTAEASIANE 104
            INL V+TD LCK MYECIENDLLGSLQ GIH+IAPY SKGI +A+EL  C + +AS  N 
Sbjct: 674  INLSVITDTLCKKMYECIENDLLGSLQHGIHNIAPYKSKGIERASELITCQSNKAS--NA 731

Query: 103  DDEPNNDH-IDGKVVE 59
            D+ P++++  DG   E
Sbjct: 732  DNCPSSENGTDGGTAE 747


>ref|XP_002519105.1| Protein ariadne-1, putative [Ricinus communis]
           gi|223541768|gb|EEF43316.1| Protein ariadne-1, putative
           [Ricinus communis]
          Length = 592

 Score =  192 bits (489), Expect = 3e-47
 Identities = 100/170 (58%), Positives = 119/170 (70%), Gaps = 1/170 (0%)
 Frame = -1

Query: 640 KAHKDSYTQESKLXXXXXXXXXXXXXRFSNY-DFSWVTNGLYRLFRSRCALTYSYPFAFY 464
           KAH DS+  E+KL             + S   DFSWVTNGL RLFRSR  L+YSYPFAFY
Sbjct: 358 KAHTDSFKLETKLKETILEKVSISEEKESRLRDFSWVTNGLCRLFRSRRVLSYSYPFAFY 417

Query: 463 MFGDYLFNYDMTKEERERKXXXXXXXXXXXEANVERLSQFIEEPFHEFDEEHLMKSRMQI 284
           MFGD LFN +MT EERE K           E+NVE+LS+F+EEPF ++ ++ +M+ RMQ+
Sbjct: 418 MFGDELFNDEMTVEEREIKQNLFEDQQQQLESNVEKLSKFLEEPFEQYTDDKVMEIRMQV 477

Query: 283 INLCVLTDNLCKSMYECIENDLLGSLQSGIHSIAPYNSKGIVKATELFVC 134
           INLC +TD LCK MYECIENDLLGSLQ G H+IAPY SKGI KA+EL  C
Sbjct: 478 INLCAITDTLCKKMYECIENDLLGSLQLGTHNIAPYKSKGIEKASELSSC 527


>ref|XP_004145339.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI1-like [Cucumis
           sativus] gi|449471519|ref|XP_004153333.1| PREDICTED:
           probable E3 ubiquitin-protein ligase ARI1-like [Cucumis
           sativus] gi|449502370|ref|XP_004161621.1| PREDICTED:
           probable E3 ubiquitin-protein ligase ARI1-like [Cucumis
           sativus]
          Length = 589

 Score =  187 bits (475), Expect = 1e-45
 Identities = 100/180 (55%), Positives = 124/180 (68%), Gaps = 1/180 (0%)
 Frame = -1

Query: 640 KAHKDSYTQESKLXXXXXXXXXXXXXRFSNY-DFSWVTNGLYRLFRSRCALTYSYPFAFY 464
           KAH DS+  ESKL             R S   DFSWV NGL RLFRSR  L+YSYPFAFY
Sbjct: 354 KAHTDSFKLESKLKESIQEKISISEERESMLRDFSWVNNGLSRLFRSRRVLSYSYPFAFY 413

Query: 463 MFGDYLFNYDMTKEERERKXXXXXXXXXXXEANVERLSQFIEEPFHEFDEEHLMKSRMQI 284
           MFGD LF  +MT+ ERE K           EANVE+LS+F+EEPF ++ ++ +M+ RMQ+
Sbjct: 414 MFGDELFKDEMTEAEREIKQHLFEDQQQQLEANVEKLSKFLEEPFDQYTKDKVMEIRMQV 473

Query: 283 INLCVLTDNLCKSMYECIENDLLGSLQSGIHSIAPYNSKGIVKATELFVCPTAEASIANE 104
           INL V+TD LCK MY+CIENDLLGSL+ GIH+IAPY SKGI KA EL  C  ++A+ +++
Sbjct: 474 INLSVITDTLCKKMYDCIENDLLGSLELGIHNIAPYKSKGIEKALELSACWNSKANTSDK 533


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