BLASTX nr result

ID: Bupleurum21_contig00029395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029395
         (825 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634326.1| PREDICTED: probable cyclic nucleotide-gated ...   115   2e-23
emb|CBI35308.3| unnamed protein product [Vitis vinifera]              115   2e-23
ref|XP_003534112.1| PREDICTED: probable cyclic nucleotide-gated ...   114   2e-23
emb|CBI35306.3| unnamed protein product [Vitis vinifera]              114   3e-23
ref|XP_002270141.2| PREDICTED: probable cyclic nucleotide-gated ...   113   6e-23

>ref|XP_003634326.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Vitis vinifera]
          Length = 783

 Score =  115 bits (287), Expect = 2e-23
 Identities = 71/210 (33%), Positives = 111/210 (52%), Gaps = 15/210 (7%)
 Frame = +3

Query: 240 WAKISFSSLYRYIPGVMDPRSKSVQICSKXXXXXXXXXXXXXXXXXXRWQSNQDNNCLTT 419
           WA+  FSSL  Y+PG+M+P +K VQ  ++                       Q+N C+  
Sbjct: 187 WARRFFSSLQSYVPGIMNPHTKVVQQWNRFFVISCLLAIFVDPLFFLLLSVQQENKCIII 246

Query: 420 LVTVWSDLI---DLTDIIFFLHIVFKFRVAYVDRESRV-----LVYDQKRVALNYLSGYF 575
            +++   ++    +TD I+ L+++ +FR+AYV  ESRV     LV   K++A++YL GYF
Sbjct: 247 DLSLTKTIVAFRSMTDFIYLLNMLLQFRLAYVAPESRVVGAGDLVDHPKKIAIHYLHGYF 306

Query: 576 IIDLIIVLPLT----LTLWKIFFQQISFYYPAEAI---FFLQFLAVLCRLVSMVADLSTS 734
           +IDL IVLPL     L +  +        Y    +     +Q++  L R +  +A  S+S
Sbjct: 307 LIDLFIVLPLPQIMILLVLPMSLGSSGANYAKNLLRTAVLVQYIPRLYRFLPFLAGQSSS 366

Query: 735 AFVYESWLSKFVVNLLAFFLVSHVVGTSWY 824
            F++ES  + FV+NLL F L  HVVG+ WY
Sbjct: 367 GFIFESAWTNFVINLLTFVLSGHVVGSCWY 396


>emb|CBI35308.3| unnamed protein product [Vitis vinifera]
          Length = 775

 Score =  115 bits (287), Expect = 2e-23
 Identities = 71/210 (33%), Positives = 111/210 (52%), Gaps = 15/210 (7%)
 Frame = +3

Query: 240 WAKISFSSLYRYIPGVMDPRSKSVQICSKXXXXXXXXXXXXXXXXXXRWQSNQDNNCLTT 419
           WA+  FSSL  Y+PG+M+P +K VQ  ++                       Q+N C+  
Sbjct: 179 WARRFFSSLQSYVPGIMNPHTKVVQQWNRFFVISCLLAIFVDPLFFLLLSVQQENKCIII 238

Query: 420 LVTVWSDLI---DLTDIIFFLHIVFKFRVAYVDRESRV-----LVYDQKRVALNYLSGYF 575
            +++   ++    +TD I+ L+++ +FR+AYV  ESRV     LV   K++A++YL GYF
Sbjct: 239 DLSLTKTIVAFRSMTDFIYLLNMLLQFRLAYVAPESRVVGAGDLVDHPKKIAIHYLHGYF 298

Query: 576 IIDLIIVLPLT----LTLWKIFFQQISFYYPAEAI---FFLQFLAVLCRLVSMVADLSTS 734
           +IDL IVLPL     L +  +        Y    +     +Q++  L R +  +A  S+S
Sbjct: 299 LIDLFIVLPLPQIMILLVLPMSLGSSGANYAKNLLRTAVLVQYIPRLYRFLPFLAGQSSS 358

Query: 735 AFVYESWLSKFVVNLLAFFLVSHVVGTSWY 824
            F++ES  + FV+NLL F L  HVVG+ WY
Sbjct: 359 GFIFESAWTNFVINLLTFVLSGHVVGSCWY 388


>ref|XP_003534112.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Glycine max]
          Length = 766

 Score =  114 bits (286), Expect = 2e-23
 Identities = 77/228 (33%), Positives = 112/228 (49%), Gaps = 25/228 (10%)
 Frame = +3

Query: 216 PTNHSQSYWAKISF-----SSLYRYIPGVMDPRSKSVQICSKXXXXXXXXXXXXXXXXXX 380
           P  H+  Y    SF     S  Y Y+PGVM+P +K VQ  +K                  
Sbjct: 165 PKFHNALYGDAKSFVRKLLSFCYSYVPGVMNPHAKVVQKWNKFLAIFCLIAIFVDPLFFF 224

Query: 381 RWQSNQDNNCLTTLVTVWSDLI---DLTDIIFFLHIVFKFRVAYVDRESRV-----LVYD 536
                +DN C+     + + L+    +TD ++FL+I+ +FR+AYV RESRV     LV  
Sbjct: 225 LLYVEKDNKCIVINWPLTTALVLFRCVTDFVYFLNILLQFRLAYVSRESRVVGAGDLVDH 284

Query: 537 QKRVALNYLSGYFIIDLIIVLPLTLTLWKIFFQQISFYYP------------AEAIFFLQ 680
            KR+AL+YL GYF+IDL +V PL   +       I F  P              A   +Q
Sbjct: 285 PKRIALHYLKGYFLIDLFVVFPLPQIM-------ILFVLPNSLEGANYAKNLLRAAILVQ 337

Query: 681 FLAVLCRLVSMVADLSTSAFVYESWLSKFVVNLLAFFLVSHVVGTSWY 824
           ++  L R + ++   S + F++ES  + F++NLL F L SHVVG+ WY
Sbjct: 338 YIPKLFRFLPLLIGQSPTGFIFESAWANFIINLLIFMLASHVVGSCWY 385


>emb|CBI35306.3| unnamed protein product [Vitis vinifera]
          Length = 777

 Score =  114 bits (285), Expect = 3e-23
 Identities = 77/235 (32%), Positives = 116/235 (49%), Gaps = 20/235 (8%)
 Frame = +3

Query: 180 PVISLHSNDQMFPTNHSQSY-----WAKISFSSLYRYIPGVMDPRSKSVQICSKXXXXXX 344
           P   + S  Q     HS  Y     WA+  FSSL  Y+PG+M+P +K VQ  ++      
Sbjct: 154 PTHFIDSRQQRNSKFHSAFYGDARGWARRFFSSLQSYVPGIMNPHTKVVQRWNRFFVISC 213

Query: 345 XXXXXXXXXXXXRWQSNQDNNCLTTLVTVWSDLI---DLTDIIFFLHIVFKFRVAYVDRE 515
                            Q+N C+   + +   ++    +TD I+ L+++ +FR+AYV  E
Sbjct: 214 LLAIFVDPLFFLLLSVQQENKCIIIDMPLTKTIVVFRSMTDFIYLLNMLLQFRLAYVAPE 273

Query: 516 SRV-----LVYDQKRVALNYLSGYFIIDLIIVLPLT----LTLWKIFFQQISFYYPAEAI 668
           SRV     LV   K++A++YL GYF+IDL IVLPL     L +  +        Y    +
Sbjct: 274 SRVVGAGDLVDHPKKIAIHYLCGYFLIDLFIVLPLPQIMILLVLPMSLGTSGANYAKNLL 333

Query: 669 ---FFLQFLAVLCRLVSMVADLSTSAFVYESWLSKFVVNLLAFFLVSHVVGTSWY 824
                +Q++  L R +  +A  S S F++ES  + FV+NLL F L  HVVG+ WY
Sbjct: 334 RTAVLVQYIPRLYRFLPFLAGQSPSGFIFESAWANFVINLLTFVLSGHVVGSCWY 388


>ref|XP_002270141.2| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Vitis vinifera]
          Length = 779

 Score =  113 bits (282), Expect = 6e-23
 Identities = 71/210 (33%), Positives = 109/210 (51%), Gaps = 15/210 (7%)
 Frame = +3

Query: 240 WAKISFSSLYRYIPGVMDPRSKSVQICSKXXXXXXXXXXXXXXXXXXRWQSNQDNNCLTT 419
           WA+  FSSL  Y+PG+M+P +K VQ  ++                       Q+N C+  
Sbjct: 181 WARRFFSSLQSYVPGIMNPHTKVVQRWNRFFVISCLLAIFVDPLFFLLLSVQQENKCIII 240

Query: 420 LVTVWSDLI---DLTDIIFFLHIVFKFRVAYVDRESRV-----LVYDQKRVALNYLSGYF 575
            + +   ++    +TD I+ L+++ +FR+AYV  ESRV     LV   K++A++YL GYF
Sbjct: 241 DMPLTKTIVVFRSMTDFIYLLNMLLQFRLAYVAPESRVVGAGDLVDHPKKIAIHYLCGYF 300

Query: 576 IIDLIIVLPLT----LTLWKIFFQQISFYYPAEAI---FFLQFLAVLCRLVSMVADLSTS 734
           +IDL IVLPL     L +  +        Y    +     +Q++  L R +  +A  S S
Sbjct: 301 LIDLFIVLPLPQIMILLVLPMSLGTSGANYAKNLLRTAVLVQYIPRLYRFLPFLAGQSPS 360

Query: 735 AFVYESWLSKFVVNLLAFFLVSHVVGTSWY 824
            F++ES  + FV+NLL F L  HVVG+ WY
Sbjct: 361 GFIFESAWANFVINLLTFVLSGHVVGSCWY 390


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