BLASTX nr result

ID: Bupleurum21_contig00029389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029389
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304148.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
ref|XP_002285079.1| PREDICTED: uncharacterized protein At1g15400...    76   3e-12
ref|XP_004152209.1| PREDICTED: uncharacterized protein At1g15400...    75   7e-12
emb|CAN63503.1| hypothetical protein VITISV_011678 [Vitis vinifera]    73   2e-11
ref|XP_002299602.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10

>ref|XP_002304148.1| predicted protein [Populus trichocarpa] gi|222841580|gb|EEE79127.1|
           predicted protein [Populus trichocarpa]
          Length = 126

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 46/117 (39%), Positives = 62/117 (52%), Gaps = 22/117 (18%)
 Frame = -3

Query: 411 FRRSGSSGAVWDDQKHVSGELKPIKTKEDGDQEAVNHKHK---RSDHD------------ 277
           FRR GSSG VWDD K +SGEL  +  K++ +++   H  K   + ++D            
Sbjct: 11  FRRQGSSGLVWDD-KLISGELNKVNQKQEHEEQEPQHDQKTDIKLENDVRPTSRSSTTPS 69

Query: 276 -----DQSKDQRKAYRTIEVTSTIDPPSPKVSGCGMC--FGKPAKKTHKRKSAGRRR 127
                 +S   ++ YRT  V+  I+PPSPKVS CG C  FGKPAK   K+   GR R
Sbjct: 70  ITIERSRSNGGQRGYRTGRVSPAIEPPSPKVSACGFCGAFGKPAKNRRKKSGKGRSR 126


>ref|XP_002285079.1| PREDICTED: uncharacterized protein At1g15400 [Vitis vinifera]
          Length = 114

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 45/106 (42%), Positives = 64/106 (60%), Gaps = 10/106 (9%)
 Frame = -3

Query: 411 FRRSGSSGAVWDDQKHVSGELKPIKTKE-DGDQEAVNHKHKRSDH-------DDQSKDQR 256
           FRR GSSG+VWDD K ++G L   K  + + +Q+A   + K S         +    +  
Sbjct: 11  FRRQGSSGSVWDD-KFLAGALNQAKQNDQEEEQKAEAGEAKLSQSPAPISVMERSRSNGG 69

Query: 255 KAYRTIEVTSTIDPPSPKVSGCGMC--FGKPAKKTHKRKSAGRRRS 124
           +AY+T++V   IDPPSP+VSGCG+C  FGKP  K+H R   G+R+S
Sbjct: 70  QAYKTVKVAPAIDPPSPRVSGCGLCGVFGKPV-KSHHRPKRGKRKS 114


>ref|XP_004152209.1| PREDICTED: uncharacterized protein At1g15400-like [Cucumis sativus]
           gi|449484181|ref|XP_004156808.1| PREDICTED:
           uncharacterized protein At1g15400-like [Cucumis sativus]
          Length = 120

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 46/111 (41%), Positives = 62/111 (55%), Gaps = 15/111 (13%)
 Frame = -3

Query: 411 FRRSGSSGAVWDDQKHVSGELKPIKTKEDGDQEAVNHKHKRSDH-------------DDQ 271
           FRR GSSG VWDD + +SGELK   T  + + E    + K +               +  
Sbjct: 11  FRRQGSSGLVWDD-RFLSGELKQTATTSEKESEENQDQGKSTAAAAAAAVEPISITIERS 69

Query: 270 SKDQRKAYRTIEVTSTIDPPSPKVSGCGMC--FGKPAKKTHKRKSAGRRRS 124
             +  + YRT +V+  I+PPSPKVS CG C  FGKPAKK+ + K+ G+RRS
Sbjct: 70  RSNGGRGYRTGKVSPAIEPPSPKVSACGFCSAFGKPAKKSRRTKT-GKRRS 119


>emb|CAN63503.1| hypothetical protein VITISV_011678 [Vitis vinifera]
          Length = 153

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 42/99 (42%), Positives = 59/99 (59%), Gaps = 10/99 (10%)
 Frame = -3

Query: 411 FRRSGSSGAVWDDQKHVSGELKPIKTKE-DGDQEAVNHKHKRSDH-------DDQSKDQR 256
           FRR GSSG+VWDD K ++G L   K  + + +Q+A   + K S         +    +  
Sbjct: 11  FRRQGSSGSVWDD-KFLAGALNQAKQNDQEEEQKAEAGEAKLSQSPAPISVMERSRSNGG 69

Query: 255 KAYRTIEVTSTIDPPSPKVSGCGMC--FGKPAKKTHKRK 145
           +AY+T++V   IDPPSP+VSGCG+C  FGKP K  H+ K
Sbjct: 70  QAYKTVKVAPAIDPPSPRVSGCGLCGVFGKPVKSHHRPK 108


>ref|XP_002299602.1| predicted protein [Populus trichocarpa] gi|222846860|gb|EEE84407.1|
           predicted protein [Populus trichocarpa]
          Length = 125

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 40/116 (34%), Positives = 60/116 (51%), Gaps = 21/116 (18%)
 Frame = -3

Query: 411 FRRSGSSGAVWDDQKHVSGELKPIKTKEDGDQEAVNHKHK--RSDHD------------- 277
           FRR GSSG +WDD +++SGEL  +  K++ +++    +    + ++D             
Sbjct: 11  FRRQGSSGLIWDD-RYISGELNQVNQKQEHEEQPKRDQRTEIKLENDARPSSRSATTPNI 69

Query: 276 ----DQSKDQRKAYRTIEVTSTIDPPSPKVSGCGMC--FGKPAKKTHKRKSAGRRR 127
                +S   ++ YRT  V+  I+PPSPKV  CG C  FGKP K   K+   GR R
Sbjct: 70  TIERSRSNGGQRGYRTGRVSPAIEPPSPKVFTCGFCGAFGKPGKNHRKKAVIGRSR 125


Top