BLASTX nr result
ID: Bupleurum21_contig00029382
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00029382
(1881 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding... 701 0.0
ref|XP_002326828.1| chromatin remodeling complex subunit [Populu... 669 0.0
ref|XP_004140512.1| PREDICTED: chromodomain-helicase-DNA-binding... 648 0.0
ref|XP_002511628.1| helicase, putative [Ricinus communis] gi|223... 642 0.0
ref|XP_004166129.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain... 640 0.0
>ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Vitis
vinifera]
Length = 876
Score = 701 bits (1809), Expect = 0.0
Identities = 364/571 (63%), Positives = 424/571 (74%), Gaps = 6/571 (1%)
Frame = +2
Query: 2 KELPRLLALSSGTPS-PSLQNIVIQLRKACSHPYLFPGIEPEPYAEGEHLVQASGXXXXX 178
KELP+LLA SSG SLQNIVIQLRKACSHPYLFPGIEPEPY EGEHLVQASG
Sbjct: 311 KELPKLLAFSSGPSGHQSLQNIVIQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLIIL 370
Query: 179 XXXXXXXXESGHRVLLFAQMTHTLDILQDFLELRRYSYERLDGSIRAEERFAAIRSFSRQ 358
SGHRVLLFAQMTHTLDILQDF+ELR+YSYERLDGS+RAEERF+AIRSFSRQ
Sbjct: 371 DQLLQKLYNSGHRVLLFAQMTHTLDILQDFMELRKYSYERLDGSVRAEERFSAIRSFSRQ 430
Query: 359 AAKGGPDAKAEASNSDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDRQALQRAHR 538
+G ++ S AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVD+QALQRAHR
Sbjct: 431 IVEGS--LNSQDVQSSAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHR 488
Query: 539 IGQMNHVLSINLVTARTIEEVIMRRAERKFQLSHNVVGEDVTDYDGKQNTGGEVGDLRAV 718
IGQMNHVLSINLVT RT+EE+IMRRAERK QLSHNVVGE D +GK+ G E GDLR+V
Sbjct: 489 IGQMNHVLSINLVTGRTVEEIIMRRAERKLQLSHNVVGEVDIDREGKEMAGAEAGDLRSV 548
Query: 719 ILGLHMFDLTEISDENSDQPSKIEMDAAVEKVLAFRDGQR-SNDDRKQEINPRGISDGHD 895
I GL M D +EI+++ S +P+ E+DA +KV+A R Q+ DDRK E+NP + GHD
Sbjct: 549 IFGLRMIDPSEINNDESSEPNMSELDAMADKVVAIRHEQQLGKDDRKFEVNPMDLLKGHD 608
Query: 896 LVPS----SVTYDPGLDEASYLSWVQKFNNESQAINDHATELVNRRKLPXXXXXXXXXXX 1063
L+ SV +DPGLDEASYL WV+KF SQ+ +D ++ NRRKLP
Sbjct: 609 LIMDRSSVSVDFDPGLDEASYLVWVEKFKEASQSSDDPIIQVGNRRKLPEEKLLKLEAAR 668
Query: 1064 XXXXXXXXXXWEALGYRSLAVKDHVSHAALDITPDTGTINFVYGDCTQPSKVCLSEPTII 1243
WEA GY SL+VKD SH +D+ D+G+++FVYGDCT PSKVC SE TII
Sbjct: 669 KKAEEEKLAKWEAHGYNSLSVKDPPSHVDVDMISDSGSVDFVYGDCTLPSKVCPSEATII 728
Query: 1244 FSCVDDSGNWGRGGLFDALAKLSESIPKAYEQASEFXXXXXXXXXXXEITETIVTESNNC 1423
FSC+DDSG WG GG+FDALA+LS S+P AY++ASEF +I E + +C
Sbjct: 729 FSCIDDSGIWGHGGMFDALARLSSSVPDAYQRASEFKDLHLGDLHFIKINEDCEEQRMDC 788
Query: 1424 TTPQWVALAVVQSYSTRRKIPRSNISMSELEQCLSKASSTAAQNSASIHMPRIGYQDGSD 1603
PQWVALAVVQSY+ RRK+PRSNIS+ +LE CLSKAS AAQ SASIHMPRIGYQ D
Sbjct: 789 NAPQWVALAVVQSYNPRRKVPRSNISVPDLECCLSKASFLAAQKSASIHMPRIGYQ---D 845
Query: 1604 RSEWYAVERILHKYAAMYGIKIYVYYYKHSA 1696
RSEWY VER+L KYA++YGIKI+VYY++ S+
Sbjct: 846 RSEWYTVERLLRKYASLYGIKIFVYYFRRSS 876
>ref|XP_002326828.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222835143|gb|EEE73578.1| chromatin remodeling complex
subunit [Populus trichocarpa]
Length = 866
Score = 669 bits (1726), Expect = 0.0
Identities = 349/564 (61%), Positives = 414/564 (73%), Gaps = 6/564 (1%)
Frame = +2
Query: 2 KELPRLLALSSGTPS-PSLQNIVIQLRKACSHPYLFPGIEPEPYAEGEHLVQASGXXXXX 178
KELP+LLALSS + SLQN+VIQLRKACSHPYLFPGIEPEPY EGEHLV+ASG
Sbjct: 307 KELPKLLALSSSASNHQSLQNMVIQLRKACSHPYLFPGIEPEPYEEGEHLVKASGKLIIL 366
Query: 179 XXXXXXXXESGHRVLLFAQMTHTLDILQDFLELRRYSYERLDGSIRAEERFAAIRSFSRQ 358
+SGHRVLLFAQMTHTLDILQDFLELR+YSYERLDGS+RAEERFAAIRSFS Q
Sbjct: 367 DQLLEKLHDSGHRVLLFAQMTHTLDILQDFLELRKYSYERLDGSVRAEERFAAIRSFSGQ 426
Query: 359 AAKGGPDAKAEASNSDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDRQALQRAHR 538
+ + G +E+ + +FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVD+QALQRAHR
Sbjct: 427 SGRSG----SESDQNSSFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHR 482
Query: 539 IGQMNHVLSINLVTARTIEEVIMRRAERKFQLSHNVVGEDVTDYDGKQNTGGEVGDLRAV 718
IGQMNHVLSINLVT ++EEVIM+RA+RK QLSH+VVG+DV + D K+ G E GDLR++
Sbjct: 483 IGQMNHVLSINLVTRHSVEEVIMQRAKRKLQLSHDVVGDDVMEEDRKETGGIETGDLRSI 542
Query: 719 ILGLHMFDLTEISDENSDQPSKIEMDAAVEKVLAFRDGQ-RSNDDRKQEINPRGISDGHD 895
I GLH FD +E++ E S++ + E+ A +KV+A R Q DDRK E+NP G G D
Sbjct: 543 IFGLHRFDPSEVNSEKSNELNASELKALAQKVIALRCDQILDKDDRKFEVNPIGQEKGLD 602
Query: 896 LVPSS----VTYDPGLDEASYLSWVQKFNNESQAINDHATELVNRRKLPXXXXXXXXXXX 1063
V +YDPGLDEASYLSWV+KF SQ+ + +L NRR LP
Sbjct: 603 FVSGGESALASYDPGLDEASYLSWVEKFKETSQSNENLVMDLGNRRNLPDNKYLNLEAAK 662
Query: 1064 XXXXXXXXXXWEALGYRSLAVKDHVSHAALDITPDTGTINFVYGDCTQPSKVCLSEPTII 1243
WEALGY SL+V D + D D+G ++FV GDCT P K+C SEP++I
Sbjct: 663 KKAEEKKLSKWEALGYHSLSVGDPIYPVDGDALSDSGFVHFVVGDCTHPDKLCSSEPSVI 722
Query: 1244 FSCVDDSGNWGRGGLFDALAKLSESIPKAYEQASEFXXXXXXXXXXXEITETIVTESNNC 1423
FSCVD+SGNWG GG+FDALAKLS SIP AY+QASEF +I E ++
Sbjct: 723 FSCVDESGNWGHGGMFDALAKLSSSIPAAYQQASEFRDLHLGDVHLVKIIENTDGQNMEG 782
Query: 1424 TTPQWVALAVVQSYSTRRKIPRSNISMSELEQCLSKASSTAAQNSASIHMPRIGYQDGSD 1603
TP+WVALAVVQSY+ RRK+PRS IS+ +LE CLSKAS AAQNSASIHMPRIGYQDG+D
Sbjct: 783 DTPRWVALAVVQSYNPRRKVPRSEISIPDLEACLSKASFAAAQNSASIHMPRIGYQDGTD 842
Query: 1604 RSEWYAVERILHKYAAMYGIKIYV 1675
RS+WY VER+L KYA+++GIKI+V
Sbjct: 843 RSQWYTVERLLRKYASVFGIKIHV 866
>ref|XP_004140512.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Cucumis
sativus]
Length = 868
Score = 648 bits (1672), Expect = 0.0
Identities = 340/569 (59%), Positives = 410/569 (72%), Gaps = 4/569 (0%)
Frame = +2
Query: 2 KELPRLLALSSGTPS-PSLQNIVIQLRKACSHPYLFPGIEPEPYAEGEHLVQASGXXXXX 178
KELP+LLA+S+G+ + SLQNIVIQLRKACSHPYLFPGIEPEPY EGEHLVQASG
Sbjct: 309 KELPKLLAVSAGSSNHQSLQNIVIQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLVVL 368
Query: 179 XXXXXXXXESGHRVLLFAQMTHTLDILQDFLELRRYSYERLDGSIRAEERFAAIRSFSRQ 358
ES HRVLLFAQMTHTLDILQDFLELR +SYERLDGSIRAEERFAAIRSFS
Sbjct: 369 DQLLQKLHESQHRVLLFAQMTHTLDILQDFLELRNFSYERLDGSIRAEERFAAIRSFSSN 428
Query: 359 AAKGGPDAKAEASNSDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDRQALQRAHR 538
+ G ++ + +DAFVF+ISTRAGGVGLNLV+ADTVIFYEQDWNPQVD+QALQRAHR
Sbjct: 429 SVGGS----SQTTRNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDKQALQRAHR 484
Query: 539 IGQMNHVLSINLVTARTIEEVIMRRAERKFQLSHNVVGEDVTDYDGKQNTGGEVGDLRAV 718
IGQ+NHVLSINLVT++T+EEVIMRRAERK QLS VVGED D D + E DLR++
Sbjct: 485 IGQINHVLSINLVTSQTVEEVIMRRAERKLQLSQKVVGEDYIDQDAEDIAMNETSDLRSI 544
Query: 719 ILGLHMFDLTEISDENSDQPSKIEMDAAVEKVLAFRDGQRSN-DDRKQEINPRGISDGHD 895
I GLH+FD ++ +E S + + A EKV+A R + SN DD + +NP S+G
Sbjct: 545 IFGLHVFDQDQVDNEKSGEFEVSNVSAMAEKVIALRHKKLSNKDDTRFLVNPTTFSNG-- 602
Query: 896 LVPSSVTYDPGLDEASYLSWVQKFNNESQAINDHATELVNRRKLPXXXXXXXXXXXXXXX 1075
+S+ +DPGLDE SY SW++KF + N EL +R+ L
Sbjct: 603 --TTSLNFDPGLDEVSYRSWIEKFKEATPGAN-QIKELEDRKTLSRDKSLKLQAAKKKAE 659
Query: 1076 XXXXXXWEALGYRSLAVKDHVSHAALDITPDTGTINFVYGDCTQPSKV--CLSEPTIIFS 1249
WEALGY SL+V+D + D+ D G++ FVYGDCT PS C+SEPTIIFS
Sbjct: 660 EKKLSKWEALGYHSLSVEDPILPNDGDLISDAGSVYFVYGDCTHPSATVNCISEPTIIFS 719
Query: 1250 CVDDSGNWGRGGLFDALAKLSESIPKAYEQASEFXXXXXXXXXXXEITETIVTESNNCTT 1429
CVDDSG+WG GG+F ALAKLSES+P AYE+ASEF ++ +S +
Sbjct: 720 CVDDSGSWGHGGMFGALAKLSESVPSAYERASEFGDLHLGDLHLIKLGIISKEQSTSDNA 779
Query: 1430 PQWVALAVVQSYSTRRKIPRSNISMSELEQCLSKASSTAAQNSASIHMPRIGYQDGSDRS 1609
PQWVALAVVQSY+ RRK+PRS IS+ +LE C+SKASS+AA++SASIHMPRIGYQDGSDRS
Sbjct: 780 PQWVALAVVQSYNPRRKVPRSKISLPDLENCISKASSSAAKHSASIHMPRIGYQDGSDRS 839
Query: 1610 EWYAVERILHKYAAMYGIKIYVYYYKHSA 1696
EWY VER+L KYA++Y +KIYVYYY+ ++
Sbjct: 840 EWYTVERLLRKYASIYNVKIYVYYYRRTS 868
>ref|XP_002511628.1| helicase, putative [Ricinus communis] gi|223548808|gb|EEF50297.1|
helicase, putative [Ricinus communis]
Length = 860
Score = 642 bits (1655), Expect = 0.0
Identities = 341/564 (60%), Positives = 404/564 (71%), Gaps = 6/564 (1%)
Frame = +2
Query: 2 KELPRLLALSSGTPS-PSLQNIVIQLRKACSHPYLFPGIEPEPYAEGEHLVQASGXXXXX 178
KELP+LLALSS + SLQNIVIQLRKACSHPYLFPGIEPEPY EGEHLVQASG
Sbjct: 311 KELPKLLALSSAASNHQSLQNIVIQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLIIL 370
Query: 179 XXXXXXXXESGHRVLLFAQMTHTLDILQDFLELRRYSYERLDGSIRAEERFAAIRSFSRQ 358
SGHRV++FAQMTHTLDILQDFLELR+YSYERLDGSIRAEERFAAIRSFS Q
Sbjct: 371 DQLLKKLHGSGHRVIIFAQMTHTLDILQDFLELRKYSYERLDGSIRAEERFAAIRSFSGQ 430
Query: 359 AAKGGPDAKAEASNSDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDRQALQRAHR 538
A +AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVD+QA+QRAHR
Sbjct: 431 AM-------------NAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQAVQRAHR 477
Query: 539 IGQMNHVLSINLVTARTIEEVIMRRAERKFQLSHNVVGEDVTDYDGKQNTGGEVGDLRAV 718
IGQMNHVLSINLVT T+EEVIMRRAE+K QLS+NV+G+DV + GK+ G E DLR++
Sbjct: 478 IGQMNHVLSINLVTRHTVEEVIMRRAEKKLQLSNNVLGDDVMEQKGKEPVGVETVDLRSI 537
Query: 719 ILGLHMFDLTEISDENSDQPSKIEMDAAVEKVLAFRDGQR-SNDDRKQEINPRGISDGHD 895
I GLH+FD +EI E D+ + E++A + KV+ RD Q + D K +++ G D
Sbjct: 538 IFGLHIFDPSEIITEKPDELNMPELNAMIVKVIGIRDDQGLAKDGGKYKLDQVDQKKGFD 597
Query: 896 LVPSS----VTYDPGLDEASYLSWVQKFNNESQAINDHATELVNRRKLPXXXXXXXXXXX 1063
+V + YDPGLDEASYLSWV++F SQ+ + +L +RR LP
Sbjct: 598 VVTGGNSAFINYDPGLDEASYLSWVERFKEASQSSGNMVLDLGHRRSLPEDKHLKLEAAK 657
Query: 1064 XXXXXXXXXXWEALGYRSLAVKDHVSHAALDITPDTGTINFVYGDCTQPSKVCLSEPTII 1243
WE+LGY SL+VKD + D+ ++G ++FV GDCT+P+KVC SEPT+I
Sbjct: 658 KKAEEKKLNKWESLGYHSLSVKDPEAVDG-DVLSESGFLHFVVGDCTEPAKVCPSEPTVI 716
Query: 1244 FSCVDDSGNWGRGGLFDALAKLSESIPKAYEQASEFXXXXXXXXXXXEITETIVTESNNC 1423
FSCVD+SGNWG GG+F+ALAKLS S+P AYE+ASEF I E T+S
Sbjct: 717 FSCVDNSGNWGHGGMFNALAKLSSSVPNAYERASEFGDLNLGDLHLIRINEDSETQSTEG 776
Query: 1424 TTPQWVALAVVQSYSTRRKIPRSNISMSELEQCLSKASSTAAQNSASIHMPRIGYQDGSD 1603
+PQWVALAVVQSY+ RRK+PRSNIS+ +LE LSK S AAQN ASIHMPRIGY DG D
Sbjct: 777 DSPQWVALAVVQSYNPRRKVPRSNISIPDLEHSLSKVSFVAAQNYASIHMPRIGYGDGLD 836
Query: 1604 RSEWYAVERILHKYAAMYGIKIYV 1675
RS+WY VER+L KYA++YGI IYV
Sbjct: 837 RSQWYTVERLLRKYASIYGINIYV 860
>ref|XP_004166129.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 1-like [Cucumis sativus]
Length = 867
Score = 640 bits (1652), Expect = 0.0
Identities = 337/569 (59%), Positives = 406/569 (71%), Gaps = 4/569 (0%)
Frame = +2
Query: 2 KELPRLLALSSGTPS-PSLQNIVIQLRKACSHPYLFPGIEPEPYAEGEHLVQASGXXXXX 178
KELP+LLA+S+G+ + SLQNIVIQLRKACSHPYLFPGIEPEPY EGEHLVQASG
Sbjct: 309 KELPKLLAVSAGSSNHQSLQNIVIQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLVVL 368
Query: 179 XXXXXXXXESGHRVLLFAQMTHTLDILQDFLELRRYSYERLDGSIRAEERFAAIRSFSRQ 358
ES HRVLLFAQMTHTLDILQDFLELR +SYERLDGSIRAEERFAAIRSFS
Sbjct: 369 DQLLQKLHESQHRVLLFAQMTHTLDILQDFLELRNFSYERLDGSIRAEERFAAIRSFSSN 428
Query: 359 AAKGGPDAKAEASNSDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDRQALQRAHR 538
+ G + + + F F+ISTRAGGVGLNLV+ADTVIFYEQDWNPQVD+QALQRAHR
Sbjct: 429 SVGG-----SSQTTRNCFCFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDKQALQRAHR 483
Query: 539 IGQMNHVLSINLVTARTIEEVIMRRAERKFQLSHNVVGEDVTDYDGKQNTGGEVGDLRAV 718
IGQ+NHVLSINLVT++T+EEVIMRRAERK QLS VVGED D D + E DLR++
Sbjct: 484 IGQINHVLSINLVTSQTVEEVIMRRAERKLQLSQKVVGEDYIDQDAEDIAMNETSDLRSI 543
Query: 719 ILGLHMFDLTEISDENSDQPSKIEMDAAVEKVLAFRDGQRSN-DDRKQEINPRGISDGHD 895
I GLH+FD ++ +E S + + A EKV+A R + SN DD + +NP S+G
Sbjct: 544 IFGLHVFDQDQVDNEKSGEFEVSNVSAMAEKVIALRHKKLSNKDDTRFLVNPTTFSNG-- 601
Query: 896 LVPSSVTYDPGLDEASYLSWVQKFNNESQAINDHATELVNRRKLPXXXXXXXXXXXXXXX 1075
+S+ +DPGLDE SY SW++KF + N EL +R+ L
Sbjct: 602 --TTSLNFDPGLDEVSYRSWIEKFKEATPGAN-QIKELEDRKTLSRDKSLKLQAAKKKAE 658
Query: 1076 XXXXXXWEALGYRSLAVKDHVSHAALDITPDTGTINFVYGDCTQPSKV--CLSEPTIIFS 1249
WEALGY SL+V+D + D+ D G++ FVYGDCT PS C+SEPTIIFS
Sbjct: 659 EKKLSKWEALGYHSLSVEDPILPNDGDLISDAGSVYFVYGDCTHPSATVNCISEPTIIFS 718
Query: 1250 CVDDSGNWGRGGLFDALAKLSESIPKAYEQASEFXXXXXXXXXXXEITETIVTESNNCTT 1429
CVDDSG+WG GG+F ALAKLSES+P AYE+ASEF ++ +S +
Sbjct: 719 CVDDSGSWGHGGMFGALAKLSESVPSAYERASEFGDLHLGDLHLIKLGIISKEQSTSDNA 778
Query: 1430 PQWVALAVVQSYSTRRKIPRSNISMSELEQCLSKASSTAAQNSASIHMPRIGYQDGSDRS 1609
PQWVALAVVQSY+ RRK+PRS IS+ +LE C+SKASS+AA++SASIHMPRIGYQDGSDRS
Sbjct: 779 PQWVALAVVQSYNPRRKVPRSKISLPDLENCISKASSSAAKHSASIHMPRIGYQDGSDRS 838
Query: 1610 EWYAVERILHKYAAMYGIKIYVYYYKHSA 1696
EWY VER+L KYA++Y +KIYVYYY+ ++
Sbjct: 839 EWYTVERLLRKYASIYNVKIYVYYYRRTS 867