BLASTX nr result

ID: Bupleurum21_contig00029380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029380
         (770 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    80   6e-13
ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|2...    80   6e-13
ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2...    79   8e-13
ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220...    79   1e-12
ref|XP_002299084.1| predicted protein [Populus trichocarpa] gi|2...    78   2e-12

>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
           predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 79.7 bits (195), Expect = 6e-13
 Identities = 44/134 (32%), Positives = 62/134 (46%), Gaps = 2/134 (1%)
 Frame = +1

Query: 13  WFFGKKPMVVHDWGANND--PGSVTSMPLWVKLSNVPDCYWTKEGLSYLVSMIGKPICAD 186
           W    +P+V+  W  N       +  +P+WV+L NVP  YWT +GLS + S +G P+ AD
Sbjct: 214 WHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHAD 273

Query: 187 RLTAQLDILPFAKVCVQYTVGSALPDSFKAAVIDPHTRKKSMVDVGVSYVSKPIVCSNCN 366
             T     L +A+VCV+      L   +     D        + +   Y   P  CSNCN
Sbjct: 274 HTTLLRKRLSYARVCVEIDASKTLVKEY-----DLRCPNGLFITISAEYEWIPSKCSNCN 328

Query: 367 SLGHYTLLCSKPKI 408
             GH T LC+   I
Sbjct: 329 VFGHTTALCATNNI 342


>ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|222836432|gb|EEE74839.1|
           predicted protein [Populus trichocarpa]
          Length = 1166

 Score = 79.7 bits (195), Expect = 6e-13
 Identities = 44/134 (32%), Positives = 62/134 (46%), Gaps = 2/134 (1%)
 Frame = +1

Query: 13  WFFGKKPMVVHDWGANND--PGSVTSMPLWVKLSNVPDCYWTKEGLSYLVSMIGKPICAD 186
           W    +P+V+  W  N       +  +P+WV+L NVP  YWT +GLS + S +G P+ AD
Sbjct: 214 WHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHAD 273

Query: 187 RLTAQLDILPFAKVCVQYTVGSALPDSFKAAVIDPHTRKKSMVDVGVSYVSKPIVCSNCN 366
             T     L +A+VCV+      L   +     D        + +   Y   P  CSNCN
Sbjct: 274 HTTLLRKRLSYARVCVEIDASKTLVKEY-----DLRCPNGLFITISAEYEWIPSKCSNCN 328

Query: 367 SLGHYTLLCSKPKI 408
             GH T LC+   I
Sbjct: 329 VFGHTTALCATNNI 342



 Score = 79.7 bits (195), Expect = 6e-13
 Identities = 44/134 (32%), Positives = 62/134 (46%), Gaps = 2/134 (1%)
 Frame = +1

Query: 13   WFFGKKPMVVHDWGANND--PGSVTSMPLWVKLSNVPDCYWTKEGLSYLVSMIGKPICAD 186
            W    +P+V+  W  N       +  +P+WV+L NVP  YWT +GLS + S +G P+ AD
Sbjct: 1007 WHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHAD 1066

Query: 187  RLTAQLDILPFAKVCVQYTVGSALPDSFKAAVIDPHTRKKSMVDVGVSYVSKPIVCSNCN 366
              T     L +A+VCV+      L   +     D        + +   Y   P  CSNCN
Sbjct: 1067 HTTLLRKRLSYARVCVEIDASKTLVKEY-----DLRCPNGLFITISAEYEWIPSKCSNCN 1121

Query: 367  SLGHYTLLCSKPKI 408
              GH T LC+   I
Sbjct: 1122 VFGHTTALCATNNI 1135


>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
           predicted protein [Populus trichocarpa]
          Length = 809

 Score = 79.3 bits (194), Expect = 8e-13
 Identities = 45/134 (33%), Positives = 61/134 (45%), Gaps = 2/134 (1%)
 Frame = +1

Query: 13  WFFGKKPMVVHDWGANND--PGSVTSMPLWVKLSNVPDCYWTKEGLSYLVSMIGKPICAD 186
           W    +P+V+  W  N          +P+WV+L NVP  YWT +GLS + S IG P+ AD
Sbjct: 214 WHMANRPLVLKRWQPNMQFLKDDFARVPVWVRLYNVPLEYWTIKGLSCVASAIGVPLHAD 273

Query: 187 RLTAQLDILPFAKVCVQYTVGSALPDSFKAAVIDPHTRKKSMVDVGVSYVSKPIVCSNCN 366
             T     L +A+VCV+      L   +     D        + +   Y   P  CSNCN
Sbjct: 274 HTTLLRKRLSYARVCVEIDASKTLVKEY-----DLRCPNGLFITISAEYEWIPSKCSNCN 328

Query: 367 SLGHYTLLCSKPKI 408
             GH T LC+   I
Sbjct: 329 VFGHTTALCATNNI 342


>ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220238, partial [Cucumis
           sativus]
          Length = 169

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 2/131 (1%)
 Frame = +1

Query: 13  WFFGKKPMVVHDWGANNDPGSVT--SMPLWVKLSNVPDCYWTKEGLSYLVSMIGKPICAD 186
           W  G KPM++  W     P +    S+P+W+KL  +P   WT  GL  + S IGKP+  D
Sbjct: 25  WHLGGKPMLLRKWTPGIVPETFVFDSVPVWIKLGRIPLELWTDAGLVVVASAIGKPLSVD 84

Query: 187 RLTAQLDILPFAKVCVQYTVGSALPDSFKAAVIDPHTRKKSMVDVGVSYVSKPIVCSNCN 366
             T +   L +A++CV+  V S +P       I  + R +  + V V+Y  KP  C+ C+
Sbjct: 85  LATKERCRLSYARICVELNVDSTMP-----IEITVNLRGEEFI-VPVTYEWKPRKCNLCH 138

Query: 367 SLGHYTLLCSK 399
           S GH    C K
Sbjct: 139 SFGHSQSTCPK 149


>ref|XP_002299084.1| predicted protein [Populus trichocarpa] gi|222846342|gb|EEE83889.1|
           predicted protein [Populus trichocarpa]
          Length = 949

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
 Frame = +1

Query: 13  WFFGKKPMVVHDW--GANNDPGSVTSMPLWVKLSNVPDCYWTKEGLSYLVSMIGKPICAD 186
           W FG K +++  W  G   D   +T +P+W+++ ++P   WTKEGLS + SM+G+P+  D
Sbjct: 8   WMFGGKAIILQKWHSGFVFDMNMITKIPVWIRIYDLPFPLWTKEGLSEVASMVGQPLSCD 67

Query: 187 RLTAQLDILPFAKVCVQYTVGSALPDSFKAAVIDPHTRKKSMVDVGVSYVSKPIVCSNCN 366
            LT     L +A++CV+          FK           ++ +V V+Y  KP  C  C 
Sbjct: 68  ELTLGCKRLDYARLCVEVDASLPFVHKFKLEF------STTIREVHVNYEWKPKRCERCP 121

Query: 367 SLGH 378
             GH
Sbjct: 122 VFGH 125



 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 3/125 (2%)
 Frame = +1

Query: 13  WFFGKKPMVVHDWGANN--DPGSVTSMPLWVKLSNVPDCYWTKEGLSYLVSMIGKPICAD 186
           W FG K +++  W  +   D   ++ +P+W++L  +P   W+K GLS   SM GKP+  D
Sbjct: 457 WMFGGKAIILQQWHPHFVFDKNKISKLPVWIRLHGLPFPLWSKSGLSLAASMAGKPLSCD 516

Query: 187 RLTAQLDILPFAKVCVQYTVGSALPDSFKAAVIDPHTR-KKSMVDVGVSYVSKPIVCSNC 363
             T     L +A VCV+  + ++LP   +    D  ++    +V + V Y  +P  C  C
Sbjct: 517 EQTYNCTHLDYAIVCVE--IDASLPFIHQ---FDMESKLSDELVLIRVEYEWRPPRCEKC 571

Query: 364 NSLGH 378
              GH
Sbjct: 572 CVFGH 576


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