BLASTX nr result

ID: Bupleurum21_contig00029360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029360
         (1198 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280452.1| PREDICTED: putative fasciclin-like arabinoga...   276   7e-72
ref|XP_004165687.1| PREDICTED: putative fasciclin-like arabinoga...   242   1e-61
ref|XP_003592555.1| Fasciclin-like arabinogalactan protein [Medi...   240   6e-61
ref|XP_002312431.1| predicted protein [Populus trichocarpa] gi|2...   239   1e-60
ref|XP_002534506.1| hypothetical protein RCOM_0377590 [Ricinus c...   232   2e-58

>ref|XP_002280452.1| PREDICTED: putative fasciclin-like arabinogalactan protein 20-like
            [Vitis vinifera]
          Length = 339

 Score =  276 bits (706), Expect = 7e-72
 Identities = 153/322 (47%), Positives = 200/322 (62%), Gaps = 1/322 (0%)
 Frame = +2

Query: 110  IMNAVETLSNAGYIVMSLTLQVTSEAVLTSQVRSTTIFAXXXXXXXXXXXXXXXLLRFHF 289
            I++A E LS++GY+ MSLTL++ S+ +L     S T+FA               LL+FH 
Sbjct: 26   ILDAAEILSDSGYVSMSLTLELVSQTLLPKSP-SATLFAASDAAFIESGQPPLSLLQFHS 84

Query: 290  SPLAFSVERLRSLPYGTKIPTMFSGKSLTVTSSPSDDRISLNNVKLGRWPIYDDGSLVIF 469
            SPLA S E LRSLP G KIPTMF+  SL VTS+ SD +ISLNNV +   P++DDGSL+IF
Sbjct: 85   SPLALSFESLRSLPVGAKIPTMFANHSLIVTSAASDSQISLNNVNITSSPLFDDGSLIIF 144

Query: 470  GIESFFDPEFTSSVQIRNPSFDLGCAVVKNQPETSSKAFMFGDASETLRARSYSVMASFL 649
            G++ FFD  F +    R+PS + GC    +    SS    F +AS  LR+R Y VMASFL
Sbjct: 145  GVDKFFDLNFPALGLTRSPSPNTGCT---DDAIASSGGDSFDEASGVLRSRGYFVMASFL 201

Query: 650  DLQLLGFIGQPKLTVFAPIDEALVKKAGDIPQY-SSLFLRHVVPCKLSWIDLVNINQGTE 826
            DLQLLGF    K+TV AP DE ++ + G+     SS+FLRHV+PCK+SW DLVN + G+ 
Sbjct: 202  DLQLLGFRDGTKMTVLAPADEVMMDRVGNFSDISSSIFLRHVLPCKVSWSDLVNFDDGSM 261

Query: 827  LQTYLEGFTMNVTKDNDLFMVNGAQITFPDMYYSDWLVVHGLHEILPLPDTPEHDGSEPS 1006
            L T LEGFT+N+T+  D   +N   + FPDMY+SDWLVVHGL E+L L   PE    + +
Sbjct: 262  LPTSLEGFTINITRSGDTLKLNEVSVAFPDMYHSDWLVVHGLGEVLTLLVGPE----QAA 317

Query: 1007 DDDSRENDHSSGSSTAPDTPKF 1072
            D  S      +   TA    +F
Sbjct: 318  DSSSETGGSKTNEQTALGNSEF 339


>ref|XP_004165687.1| PREDICTED: putative fasciclin-like arabinogalactan protein 20-like
            [Cucumis sativus]
          Length = 328

 Score =  242 bits (618), Expect = 1e-61
 Identities = 136/310 (43%), Positives = 187/310 (60%), Gaps = 2/310 (0%)
 Frame = +2

Query: 110  IMNAVETLSNAGYIVMSLTLQVTSEAVLTSQVRSTTIFAXXXXXXXXXXXXXXXLLRFHF 289
            +++A E LSN G++ M+LTL++ ++++L SQ  S TIF+               LLRFHF
Sbjct: 27   VLDAAEILSNNGFVSMALTLELIADSLL-SQSNSITIFSPPDTSFVQSGQPSLSLLRFHF 85

Query: 290  SPLAFSVERLRSLPYGTKIPTMFSGKSLTVTSSPSDDRISLNNVKLGRWPIYDDGSLVIF 469
             PL  S   LRS  +GTKIPTM   +SLTVT+  SD  ISLN VK+   P YDDG LV++
Sbjct: 86   LPLYLSSGSLRSFAFGTKIPTMLPSQSLTVTTPQSDSVISLNRVKVSSSPFYDDGLLVVY 145

Query: 470  GIESFFDPEFTSSVQIRNPSFDLGCAVVKNQPETSSKAFMFGDASETLRARSYSVMASFL 649
            GIE FFD +F S     N  F      ++N          FG+A ETLR+  YS MA FL
Sbjct: 146  GIEKFFDLKFHSP----NMKFRCDLLTIRNP---------FGEAIETLRSHGYSSMALFL 192

Query: 650  DLQLLGFI-GQPKL-TVFAPIDEALVKKAGDIPQYSSLFLRHVVPCKLSWIDLVNINQGT 823
            + Q+LGF  GQ  + TVFAP D+AL  +      Y SL+ R + PC++SW DLV++  GT
Sbjct: 193  ESQILGFSNGQSSMMTVFAPSDDALETRVDKFTDYPSLYFRQISPCRISWNDLVDLEDGT 252

Query: 824  ELQTYLEGFTMNVTKDNDLFMVNGAQITFPDMYYSDWLVVHGLHEILPLPDTPEHDGSEP 1003
            EL TY EG+T+ VTK + +  +NG  + +P+MY ++WLVVHGL ++ P+    E   +  
Sbjct: 253  ELSTYSEGYTIYVTKSSGMLRINGVAVFYPNMYLNEWLVVHGLLDVFPV---AERISTVE 309

Query: 1004 SDDDSRENDH 1033
            SD + R N+H
Sbjct: 310  SDSEMRSNNH 319


>ref|XP_003592555.1| Fasciclin-like arabinogalactan protein [Medicago truncatula]
           gi|355481603|gb|AES62806.1| Fasciclin-like
           arabinogalactan protein [Medicago truncatula]
          Length = 340

 Score =  240 bits (612), Expect = 6e-61
 Identities = 127/286 (44%), Positives = 180/286 (62%), Gaps = 1/286 (0%)
 Frame = +2

Query: 110 IMNAVETLSNAGYIVMSLTLQVTSEAVLTSQVRSTTIFAXXXXXXXXXXXXXXXLLRFHF 289
           I +A + L ++G++ MSLTL++ +E++L  Q  S T+FA               LLRFHF
Sbjct: 28  IFDAADILLDSGFVSMSLTLEIVAESLL-EQSHSATVFAPSDSAFKKSGQPSLDLLRFHF 86

Query: 290 SPLAFSVERLRSLPYGTKIPTMFSGKSLTVTSSPSDDRISLNNVKLGRWPIYDDGSLVIF 469
             L    + LR LP G K+PTM +G+SLTVT+S SD   S+NN+K+   PIYDDG L+++
Sbjct: 87  VMLPLPQQSLRRLPAGAKLPTMLTGQSLTVTTSFSDRVTSVNNIKINGTPIYDDGVLLVY 146

Query: 470 GIESFFDPEFTSSVQIRNP-SFDLGCAVVKNQPETSSKAFMFGDASETLRARSYSVMASF 646
           GI+ FFDP F  +   R P S+        N+   SS +F    A +TL+   YSVMASF
Sbjct: 147 GIDRFFDPNFQYTGPSRKPNSYSNSSCSALNRTVNSSGSFE--QAVKTLKTSGYSVMASF 204

Query: 647 LDLQLLGFIGQPKLTVFAPIDEALVKKAGDIPQYSSLFLRHVVPCKLSWIDLVNINQGTE 826
           L +QL G I Q  +TVFAP DE ++ + GD   Y S F RHVVPCK  W DLV+   GT+
Sbjct: 205 LGMQLSGNINQNGITVFAPTDEMVMNRIGDFEDYPSFFRRHVVPCKFLWNDLVDFGDGTQ 264

Query: 827 LQTYLEGFTMNVTKDNDLFMVNGAQITFPDMYYSDWLVVHGLHEIL 964
           L T+LEGF++N+T+   + ++NG  + FPD++++D LVVHG+ ++L
Sbjct: 265 LPTFLEGFSINITRSGGVLILNGVPVFFPDVFFNDRLVVHGVTDVL 310


>ref|XP_002312431.1| predicted protein [Populus trichocarpa] gi|222852251|gb|EEE89798.1|
           predicted protein [Populus trichocarpa]
          Length = 348

 Score =  239 bits (610), Expect = 1e-60
 Identities = 127/282 (45%), Positives = 175/282 (62%), Gaps = 1/282 (0%)
 Frame = +2

Query: 110 IMNAVETLSNAGYIVMSLTLQVTSEAVLTSQVRSTTIFAXXXXXXXXXXXXXXXLLRFHF 289
           I++A + LSN+GY+ M+L L+  S+  L    +S TIF+               LL FHF
Sbjct: 27  ILDATQILSNSGYVAMALILEFGSQTDLIPPSQSLTIFSPSDTAFSLSGQPSLDLLHFHF 86

Query: 290 SPLAFSVERLRSLPYGTKIPTMFSGKSLTVTSSPSDDRISLNNVKLGRWPIYDDGSLVIF 469
           +P +FS+  L+SLP G +IPT+FS  SL ++S+ +D + S+N VK+    +YDDG LVIF
Sbjct: 87  TPRSFSLNSLKSLPPGYQIPTLFSNHSLVISSN-ADSQTSVNGVKINGSALYDDGFLVIF 145

Query: 470 GIESFFDPEFTSSVQIRNPSFDL-GCAVVKNQPETSSKAFMFGDASETLRARSYSVMASF 646
           G+++F DP+FT S  I   +  + GC V     + S     F +AS  L++R YSVMASF
Sbjct: 146 GVDNFLDPDFTVSGSINGSTGGIRGCYVTSGDDDCS-----FEEASGVLKSRGYSVMASF 200

Query: 647 LDLQLLGFIGQPKLTVFAPIDEALVKKAGDIPQYSSLFLRHVVPCKLSWIDLVNINQGTE 826
           LDLQL  F    +LT+ AP+DE L    GD   Y S+FLRHVVPCK+SW DLV+++ G  
Sbjct: 201 LDLQLAKFKDHTRLTILAPVDEVLKGFMGDFSDYRSIFLRHVVPCKISWRDLVSLDDGVV 260

Query: 827 LQTYLEGFTMNVTKDNDLFMVNGAQITFPDMYYSDWLVVHGL 952
           L TYL GF +NVT  +   M NG Q+  P++Y + WL VHGL
Sbjct: 261 LPTYLRGFKINVTVSSTFLMFNGVQVIVPEIYSNSWLTVHGL 302


>ref|XP_002534506.1| hypothetical protein RCOM_0377590 [Ricinus communis]
           gi|223525155|gb|EEF27876.1| hypothetical protein
           RCOM_0377590 [Ricinus communis]
          Length = 339

 Score =  232 bits (591), Expect = 2e-58
 Identities = 126/297 (42%), Positives = 181/297 (60%), Gaps = 8/297 (2%)
 Frame = +2

Query: 110 IMNAVETLSNAGYIVMSLTLQVTSEAVLTSQVRSTTIFAXXXXXXXXXXXXXXXLLRFHF 289
           ++ A E LSN+GY+ MSLTLQ+ S   +     S TIF+               LL+FH 
Sbjct: 32  LVRAAEMLSNSGYLSMSLTLQLISSTWIIPHSPSLTIFSPSDSAFAQSGQPSLSLLQFHL 91

Query: 290 SPLAFSVERLRSLPYGTKIPTMFSGKSLTVTSSPSDDRISLNNVKLGRWPIYDDGSLVIF 469
            PL+F +  LR+LP+G+KIPT+ S  S+T+ +   +  + LN VK+   P YDDGSLV+ 
Sbjct: 92  CPLSFHLNSLRALPFGSKIPTLSSNLSITIVND-DNGTVFLNGVKILGCP-YDDGSLVVL 149

Query: 470 GIESFFDPEFTSSVQ-----IRNPSFDLGCAVVKNQPETSSKAFMFGDASETLRARSYSV 634
           G++ F DP+F  S+      +  PS +L C       +  +  ++F +A+  LR+   SV
Sbjct: 150 GVDKFLDPDFVVSLASPPSPVPVPSANLACG-----SDFKNGVYLFKEATNVLRSNGCSV 204

Query: 635 MASFLDLQLLGFIGQ---PKLTVFAPIDEALVKKAGDIPQYSSLFLRHVVPCKLSWIDLV 805
           MASFLDLQL+    +   P LTVFAP+DE +    GD+ QYS +FLRHVVPCK++W DLV
Sbjct: 205 MASFLDLQLMSGFKEKQRPLLTVFAPLDEVMKGFIGDVDQYSLIFLRHVVPCKITWKDLV 264

Query: 806 NINQGTELQTYLEGFTMNVTKDNDLFMVNGAQITFPDMYYSDWLVVHGLHEILPLPD 976
           + + G    T+LEGF + V++  D+ M+N   ++FPDMY ++WLVVHGL  +L  PD
Sbjct: 265 DFDDGMVFDTFLEGFGITVSRSGDILMLNEVPVSFPDMYRNEWLVVHGLRGMLDGPD 321


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