BLASTX nr result

ID: Bupleurum21_contig00029327 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029327
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_175242.7| calcium-dependent lipid-binding-like protein [A...   130   1e-28
ref|XP_002311365.1| predicted protein [Populus trichocarpa] gi|2...   125   5e-27
ref|XP_002519289.1| vacuolar protein sorting-associated protein,...   122   4e-26
emb|CBI25975.3| unnamed protein product [Vitis vinifera]              120   2e-25
ref|XP_004147663.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   118   6e-25

>ref|NP_175242.7| calcium-dependent lipid-binding-like protein [Arabidopsis thaliana]
           gi|332194125|gb|AEE32246.1| calcium-dependent
           lipid-binding-like protein [Arabidopsis thaliana]
          Length = 4146

 Score =  130 bits (327), Expect = 1e-28
 Identities = 66/123 (53%), Positives = 83/123 (67%), Gaps = 2/123 (1%)
 Frame = -1

Query: 367 DQVQFLCHLRRRYIQLYASSLQKISNVNIKEIRDIEKDLDPKVILLWRFLAHXXXXXXXX 188
           D +  LC LRRRYIQLYA+ LQ+ S+VN  E+R+IEKDLD KVILLWR LAH        
Sbjct: 406 DSIHHLCQLRRRYIQLYANFLQQSSDVNYPEMREIEKDLDSKVILLWRLLAHAKVESVKS 465

Query: 187 XXXXXXRMSRKNSWFSFTWHSPAEDAPVEET--SDSQTLEERLTKEEWQAINNLLSYQPD 14
                 R  +K  WFSF W + AED P  ++    S+ +EERLTK+EW+AIN LLS+QPD
Sbjct: 466 KEAAEQRKLKKGGWFSFNWRTEAEDDPEVDSVAGGSKLMEERLTKDEWKAINKLLSHQPD 525

Query: 13  EDL 5
           E++
Sbjct: 526 EEM 528


>ref|XP_002311365.1| predicted protein [Populus trichocarpa] gi|222851185|gb|EEE88732.1|
           predicted protein [Populus trichocarpa]
          Length = 4264

 Score =  125 bits (313), Expect = 5e-27
 Identities = 64/122 (52%), Positives = 81/122 (66%), Gaps = 1/122 (0%)
 Frame = -1

Query: 367 DQVQFLCHLRRRYIQLYASSLQKISNVNIKEIRDIEKDLDPKVILLWRFLAHXXXXXXXX 188
           D++Q LC LRR Y+QLYA+ LQ+ SN +  E+R++EKDLD KVILLWR LAH        
Sbjct: 365 DRIQHLCQLRRHYVQLYAAMLQQSSNASTSELREMEKDLDSKVILLWRLLAHAKAESLKT 424

Query: 187 XXXXXXRMSRKNSWFSFTWHSPAEDAPVEETSD-SQTLEERLTKEEWQAINNLLSYQPDE 11
                 R  +K  WFSF W + +EDA   + S+ SQ  EE+LT+EEW AIN LLSYQ DE
Sbjct: 425 KEAAEQRRLKKKGWFSFGWRTNSEDASDGDASEASQLREEKLTQEEWLAINKLLSYQSDE 484

Query: 10  DL 5
           +L
Sbjct: 485 EL 486


>ref|XP_002519289.1| vacuolar protein sorting-associated protein, putative [Ricinus
           communis] gi|223541604|gb|EEF43153.1| vacuolar protein
           sorting-associated protein, putative [Ricinus communis]
          Length = 4423

 Score =  122 bits (305), Expect = 4e-26
 Identities = 64/112 (57%), Positives = 76/112 (67%), Gaps = 1/112 (0%)
 Frame = -1

Query: 337 RRYIQLYASSLQKISNVNIKEIRDIEKDLDPKVILLWRFLAHXXXXXXXXXXXXXXRMSR 158
           RR   LYASSLQ+ SN  + E+R++EKDLD KVILLWR LAH              R  +
Sbjct: 382 RRVFILYASSLQQSSNAYMSELREMEKDLDSKVILLWRLLAHAKVESVKTKEAAEQRRLK 441

Query: 157 KNSWFSFTWHSPAEDAP-VEETSDSQTLEERLTKEEWQAINNLLSYQPDEDL 5
           + SWFSF WH+ +ED+  V  +  SQ  EERLTKEEWQAINNLLSYQPDE+L
Sbjct: 442 RKSWFSFRWHTDSEDSSNVGASEGSQLTEERLTKEEWQAINNLLSYQPDEEL 493


>emb|CBI25975.3| unnamed protein product [Vitis vinifera]
          Length = 4328

 Score =  120 bits (300), Expect = 2e-25
 Identities = 66/121 (54%), Positives = 78/121 (64%), Gaps = 1/121 (0%)
 Frame = -1

Query: 364 QVQFLCHLRRRYIQLYASSLQKISNVNIKEIRDIEKDLDPKVILLWRFLAHXXXXXXXXX 185
           +++  CHLRRRY+QLYA  LQ+ S  +  E+R IEKDLD KVILLWR LAH         
Sbjct: 420 RIRHFCHLRRRYVQLYAGFLQQ-SLSDSSELRKIEKDLDSKVILLWRLLAHAKVESVKSK 478

Query: 184 XXXXXRMSRKNSWFSFTWHSPAEDAPVEETSDSQTLEE-RLTKEEWQAINNLLSYQPDED 8
                R  +K SWFSF   SP+ D  V + S+   L E RLTKEEWQAIN LLSYQPDE+
Sbjct: 479 EAAERRRLKKRSWFSFRGSSPSGDVSVTDASEEPQLTEGRLTKEEWQAINKLLSYQPDEE 538

Query: 7   L 5
           L
Sbjct: 539 L 539


>ref|XP_004147663.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101213129 [Cucumis sativus]
          Length = 4194

 Score =  118 bits (295), Expect = 6e-25
 Identities = 62/111 (55%), Positives = 74/111 (66%), Gaps = 1/111 (0%)
 Frame = -1

Query: 337 RRYIQLYASSLQKISNVNIKEIRDIEKDLDPKVILLWRFLAHXXXXXXXXXXXXXXRMSR 158
           RRYIQLYA SLQ++SN +  EIR+IEKDLD KVILLWR LAH              +  +
Sbjct: 391 RRYIQLYAGSLQRMSNTSNNEIREIEKDLDSKVILLWRLLAHAKIESVKSKEAAEQKRLK 450

Query: 157 KNSWFSFTWHSPAEDAPVEETSDSQTL-EERLTKEEWQAINNLLSYQPDED 8
           K+SWFSF W + +ED    + S+   L  E+LTKEEWQAIN LLSYQ DED
Sbjct: 451 KSSWFSFRWRANSEDTSDGDASEGSYLGVEQLTKEEWQAINKLLSYQQDED 501


Top