BLASTX nr result

ID: Bupleurum21_contig00029324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029324
         (1444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31761.3| unnamed protein product [Vitis vinifera]              447   e-123
ref|XP_002279871.1| PREDICTED: uncharacterized protein LOC100242...   447   e-123
emb|CAN65314.1| hypothetical protein VITISV_041340 [Vitis vinifera]   443   e-122
ref|XP_002520382.1| conserved hypothetical protein [Ricinus comm...   431   e-118
ref|XP_002302619.1| predicted protein [Populus trichocarpa] gi|2...   426   e-116

>emb|CBI31761.3| unnamed protein product [Vitis vinifera]
          Length = 312

 Score =  447 bits (1149), Expect = e-123
 Identities = 208/292 (71%), Positives = 253/292 (86%), Gaps = 1/292 (0%)
 Frame = +3

Query: 453  KSFDKSVHFQPTVERKNGTELIWQIPDAPKAILFLAHGCNGRAANFWDRTDSCPHCVGLP 632
            +S D  V F PT+E +NGT++IWQIPD+PKA+LFLAHGCNG+A NFWDR+ SCP CVGLP
Sbjct: 20   QSSDPLVQFHPTIEFRNGTDVIWQIPDSPKAVLFLAHGCNGQAVNFWDRSPSCPDCVGLP 79

Query: 633  EERLIALHALYQKFAVLTVSSAGRCWSFGSERLAVAGIIKWWIKKQKLEKLPIVALGASS 812
            EERLI LH+L +KFAVLT+SSAG+CWSFG E L V GII+WWI+K KLEKLP+VALGASS
Sbjct: 80   EERLIVLHSLNRKFAVLTISSAGKCWSFGKESLIVKGIIQWWIEKNKLEKLPLVALGASS 139

Query: 813  GGYFVSALATDIRFSSITIMIAEGLFSRMNIPKDYPPTLFVHMPKDEARKLRVDENIKVL 992
            GGYFVS LAT++RFSS+T+MIAEGLF +++I KDYPPTLFVHMPKD+ARK R+ EN+++L
Sbjct: 140  GGYFVSVLATNLRFSSVTLMIAEGLFHKIDIMKDYPPTLFVHMPKDQARKQRIAENMEIL 199

Query: 993  KKMGVDVAEIKCMEFQLSPNFLADRIQGLDLTTSVKIFRLFQEKGFIDKNGFMRNDGRAT 1172
            +  G+DVAE+KCMEF LSP FLADRI G+D   S K+F L ++KGFI+ NG+MRNDGRAT
Sbjct: 200  RNKGIDVAEVKCMEFPLSPYFLADRIPGVDKNISAKLFGLLRDKGFINVNGYMRNDGRAT 259

Query: 1173 HWKAVLREKNILLPDKNL-VNHIQEELNLAFAYHEMTSLQNEQIFHWFESHV 1325
            +WK VL E NI+ PD ++ V+HIQEELNLAFAYHEMTSLQ+EQIF+WFESH+
Sbjct: 260  NWKKVLSESNIIFPDWDIFVHHIQEELNLAFAYHEMTSLQSEQIFNWFESHM 311


>ref|XP_002279871.1| PREDICTED: uncharacterized protein LOC100242074 [Vitis vinifera]
          Length = 346

 Score =  447 bits (1149), Expect = e-123
 Identities = 208/292 (71%), Positives = 253/292 (86%), Gaps = 1/292 (0%)
 Frame = +3

Query: 453  KSFDKSVHFQPTVERKNGTELIWQIPDAPKAILFLAHGCNGRAANFWDRTDSCPHCVGLP 632
            +S D  V F PT+E +NGT++IWQIPD+PKA+LFLAHGCNG+A NFWDR+ SCP CVGLP
Sbjct: 54   QSSDPLVQFHPTIEFRNGTDVIWQIPDSPKAVLFLAHGCNGQAVNFWDRSPSCPDCVGLP 113

Query: 633  EERLIALHALYQKFAVLTVSSAGRCWSFGSERLAVAGIIKWWIKKQKLEKLPIVALGASS 812
            EERLI LH+L +KFAVLT+SSAG+CWSFG E L V GII+WWI+K KLEKLP+VALGASS
Sbjct: 114  EERLIVLHSLNRKFAVLTISSAGKCWSFGKESLIVKGIIQWWIEKNKLEKLPLVALGASS 173

Query: 813  GGYFVSALATDIRFSSITIMIAEGLFSRMNIPKDYPPTLFVHMPKDEARKLRVDENIKVL 992
            GGYFVS LAT++RFSS+T+MIAEGLF +++I KDYPPTLFVHMPKD+ARK R+ EN+++L
Sbjct: 174  GGYFVSVLATNLRFSSVTLMIAEGLFHKIDIMKDYPPTLFVHMPKDQARKQRIAENMEIL 233

Query: 993  KKMGVDVAEIKCMEFQLSPNFLADRIQGLDLTTSVKIFRLFQEKGFIDKNGFMRNDGRAT 1172
            +  G+DVAE+KCMEF LSP FLADRI G+D   S K+F L ++KGFI+ NG+MRNDGRAT
Sbjct: 234  RNKGIDVAEVKCMEFPLSPYFLADRIPGVDKNISAKLFGLLRDKGFINVNGYMRNDGRAT 293

Query: 1173 HWKAVLREKNILLPDKNL-VNHIQEELNLAFAYHEMTSLQNEQIFHWFESHV 1325
            +WK VL E NI+ PD ++ V+HIQEELNLAFAYHEMTSLQ+EQIF+WFESH+
Sbjct: 294  NWKKVLSESNIIFPDWDIFVHHIQEELNLAFAYHEMTSLQSEQIFNWFESHM 345


>emb|CAN65314.1| hypothetical protein VITISV_041340 [Vitis vinifera]
          Length = 346

 Score =  443 bits (1140), Expect = e-122
 Identities = 208/292 (71%), Positives = 252/292 (86%), Gaps = 1/292 (0%)
 Frame = +3

Query: 453  KSFDKSVHFQPTVERKNGTELIWQIPDAPKAILFLAHGCNGRAANFWDRTDSCPHCVGLP 632
            +S D  V F PT+E +NGT++IWQIPD+PKA+LFLAHGCNG+A NFWDR+ SC  CVGLP
Sbjct: 54   QSSDPLVQFHPTIEFRNGTDVIWQIPDSPKAVLFLAHGCNGQAVNFWDRSPSCLDCVGLP 113

Query: 633  EERLIALHALYQKFAVLTVSSAGRCWSFGSERLAVAGIIKWWIKKQKLEKLPIVALGASS 812
            EERLI LH+L +KFAVLT+SSAG+CWSFG E L V GII+WWI+K KLEKLP+VALGASS
Sbjct: 114  EERLIVLHSLNRKFAVLTISSAGKCWSFGKESLIVKGIIQWWIEKNKLEKLPLVALGASS 173

Query: 813  GGYFVSALATDIRFSSITIMIAEGLFSRMNIPKDYPPTLFVHMPKDEARKLRVDENIKVL 992
            GGYFVS LAT++RFSSIT+MIAEGLF +++I KDYPPTLFVHMPKD+ARK R+ EN+++L
Sbjct: 174  GGYFVSVLATNLRFSSITLMIAEGLFHKIDIMKDYPPTLFVHMPKDQARKQRIAENMEIL 233

Query: 993  KKMGVDVAEIKCMEFQLSPNFLADRIQGLDLTTSVKIFRLFQEKGFIDKNGFMRNDGRAT 1172
            +  G+DVAE+KCMEF LSP FLADRI G+D   S K+F L ++KGFI+ NG+MRNDGRAT
Sbjct: 234  RNKGIDVAEVKCMEFPLSPYFLADRIPGVDKNISAKLFGLLRDKGFINVNGYMRNDGRAT 293

Query: 1173 HWKAVLREKNILLPDKNL-VNHIQEELNLAFAYHEMTSLQNEQIFHWFESHV 1325
            +WK VL E NI+ PD ++ V+HIQEELNLAFAYHEMTSLQ+EQIF+WFESH+
Sbjct: 294  NWKKVLSESNIIFPDWDIFVHHIQEELNLAFAYHEMTSLQSEQIFNWFESHM 345


>ref|XP_002520382.1| conserved hypothetical protein [Ricinus communis]
            gi|223540429|gb|EEF41998.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 347

 Score =  431 bits (1109), Expect = e-118
 Identities = 199/307 (64%), Positives = 252/307 (82%)
 Frame = +3

Query: 408  GANDHSLSTLKIEKFKSFDKSVHFQPTVERKNGTELIWQIPDAPKAILFLAHGCNGRAAN 587
            G   +S     ++++ +F+ SV F PT+E +NGT++IWQIPD+PKA+LFLAHGCNGRA N
Sbjct: 42   GRRSYSSPGSTMQRWNTFE-SVEFHPTIEFRNGTDVIWQIPDSPKAVLFLAHGCNGRAVN 100

Query: 588  FWDRTDSCPHCVGLPEERLIALHALYQKFAVLTVSSAGRCWSFGSERLAVAGIIKWWIKK 767
            FWDR+  CP+C+GLPEERL+ LHAL  KFAVLT+SSAGRCW+FG E L V  IIK W+++
Sbjct: 101  FWDRSHYCPNCIGLPEERLLVLHALANKFAVLTISSAGRCWTFGEEMLVVKNIIKSWVRR 160

Query: 768  QKLEKLPIVALGASSGGYFVSALATDIRFSSITIMIAEGLFSRMNIPKDYPPTLFVHMPK 947
             KLE +P+VALGASSGGYFVSALAT +RFSSIT+MIAEG+F+++++ ++YPPTLFVHMPK
Sbjct: 161  HKLENIPLVALGASSGGYFVSALATILRFSSITVMIAEGVFNQIDVAQNYPPTLFVHMPK 220

Query: 948  DEARKLRVDENIKVLKKMGVDVAEIKCMEFQLSPNFLADRIQGLDLTTSVKIFRLFQEKG 1127
            D  R+ ++ E++K LK  G+DVAE++C+EF LSP+FL DRI GLD T S K+F LFQ +G
Sbjct: 221  DLPRQQKISESVKFLKNKGIDVAEVECIEFPLSPSFLGDRIPGLDQTISAKLFELFQNRG 280

Query: 1128 FIDKNGFMRNDGRATHWKAVLREKNILLPDKNLVNHIQEELNLAFAYHEMTSLQNEQIFH 1307
            FIDKN +M+ DGRAT WKA LRE    + DKNLV H+QEELNLAFAYHEMTSLQ+EQIF 
Sbjct: 281  FIDKNRYMKKDGRATRWKAALRETKDFVLDKNLVQHVQEELNLAFAYHEMTSLQSEQIFK 340

Query: 1308 WFESHVK 1328
            WFESH++
Sbjct: 341  WFESHME 347


>ref|XP_002302619.1| predicted protein [Populus trichocarpa] gi|222844345|gb|EEE81892.1|
            predicted protein [Populus trichocarpa]
          Length = 321

 Score =  426 bits (1094), Expect = e-116
 Identities = 199/307 (64%), Positives = 249/307 (81%)
 Frame = +3

Query: 405  DGANDHSLSTLKIEKFKSFDKSVHFQPTVERKNGTELIWQIPDAPKAILFLAHGCNGRAA 584
            +G +  S     I+K+ SF+ SV F PT+E +NGT++IWQIP  PKA+LF+AHGC+GRAA
Sbjct: 15   NGKSPDSSFGYPIKKWNSFE-SVQFNPTIELRNGTDVIWQIPSLPKAVLFVAHGCDGRAA 73

Query: 585  NFWDRTDSCPHCVGLPEERLIALHALYQKFAVLTVSSAGRCWSFGSERLAVAGIIKWWIK 764
            NFWDR+ SCP+C+GLPEERL+ LHAL +KFAV+T+SSAGRCW+FG ERL V  II+WW +
Sbjct: 74   NFWDRSSSCPNCIGLPEERLLVLHALARKFAVITISSAGRCWTFGEERLIVKNIIQWWAQ 133

Query: 765  KQKLEKLPIVALGASSGGYFVSALATDIRFSSITIMIAEGLFSRMNIPKDYPPTLFVHMP 944
               LE LP+VALGASSGGYFVSA+AT++RFSSIT+MIAEG F +M+I  +YPPTLFVHMP
Sbjct: 134  THNLESLPLVALGASSGGYFVSAVATNLRFSSITLMIAEGKFDQMDITVNYPPTLFVHMP 193

Query: 945  KDEARKLRVDENIKVLKKMGVDVAEIKCMEFQLSPNFLADRIQGLDLTTSVKIFRLFQEK 1124
            KD  R+ ++ E I+VLK  G+D AE++CMEF LSP+FLADRI G++ T S K+F LFQ K
Sbjct: 194  KDSYRQQKISEFIEVLKNKGIDAAEVECMEFPLSPSFLADRIPGMNQTVSAKLFELFQVK 253

Query: 1125 GFIDKNGFMRNDGRATHWKAVLREKNILLPDKNLVNHIQEELNLAFAYHEMTSLQNEQIF 1304
             F+D NG+M+ DGRAT WK  LRE   L+ DK++V H+QEELNLAFAYHEMTSLQ+EQIF
Sbjct: 254  SFVDGNGYMKKDGRATRWKEALRECKNLVLDKSMVQHVQEELNLAFAYHEMTSLQSEQIF 313

Query: 1305 HWFESHV 1325
             WFESH+
Sbjct: 314  KWFESHL 320


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