BLASTX nr result

ID: Bupleurum21_contig00029320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029320
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281557.1| PREDICTED: short-chain dehydrogenase TIC 32,...   189   2e-46
ref|XP_002511352.1| short-chain dehydrogenase, putative [Ricinus...   179   3e-43
ref|XP_004138098.1| PREDICTED: short-chain dehydrogenase TIC 32,...   176   1e-42
ref|XP_002322183.1| predicted protein [Populus trichocarpa] gi|2...   176   2e-42
ref|XP_003601227.1| Retinol dehydrogenase [Medicago truncatula] ...   174   7e-42

>ref|XP_002281557.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Vitis
           vinifera] gi|297733735|emb|CBI14982.3| unnamed protein
           product [Vitis vinifera]
          Length = 330

 Score =  189 bits (481), Expect = 2e-46
 Identities = 99/147 (67%), Positives = 112/147 (76%)
 Frame = -2

Query: 443 LCSFSSIRRFCSMFXXXXXXXXXXXXNAGKFSNKLESSEDKVETTFATNYLGHFXXXXXX 264
           L SF+SI+RFCS F            NAGKFS+KLE SEDK+E +FATNYLGHF      
Sbjct: 95  LSSFASIKRFCSEFLSLGLPLHILINNAGKFSHKLEFSEDKIEMSFATNYLGHFLLTELL 154

Query: 263 XEKMVETAAETGIQGRIVNVSSVIHSWAKRRHFCFKQMVQPNSYNGTRAYAQSKLAIILH 84
            EKMVETAA+TGIQGRI+NVSSVIHSW KR  F F QM+ P +YNGTRAYAQSKLA ILH
Sbjct: 155 IEKMVETAAQTGIQGRIINVSSVIHSWVKRDGFRFNQMLNPKNYNGTRAYAQSKLANILH 214

Query: 83  AKELARRLQLQKVNVTVNAVHPGIVKT 3
           AKELAR+L+ +   VT+NAVHPGIVKT
Sbjct: 215 AKELARQLKARNARVTINAVHPGIVKT 241


>ref|XP_002511352.1| short-chain dehydrogenase, putative [Ricinus communis]
           gi|223550467|gb|EEF51954.1| short-chain dehydrogenase,
           putative [Ricinus communis]
          Length = 355

 Score =  179 bits (453), Expect = 3e-43
 Identities = 92/147 (62%), Positives = 108/147 (73%)
 Frame = -2

Query: 443 LCSFSSIRRFCSMFXXXXXXXXXXXXNAGKFSNKLESSEDKVETTFATNYLGHFXXXXXX 264
           L SF+S+++F S F            NAG FS  LE SEDK+E TFATNYLGHF      
Sbjct: 122 LSSFASVKKFYSDFLALGLPLNILINNAGIFSQNLEFSEDKIEMTFATNYLGHFLLTELL 181

Query: 263 XEKMVETAAETGIQGRIVNVSSVIHSWAKRRHFCFKQMVQPNSYNGTRAYAQSKLAIILH 84
            EKM+ETAA TGIQGRI+N+SSVIHSW KR  F F QM++P +YNGTRAYAQSKLA ILH
Sbjct: 182 LEKMIETAAGTGIQGRIINLSSVIHSWVKRDSFSFNQMIRPKNYNGTRAYAQSKLATILH 241

Query: 83  AKELARRLQLQKVNVTVNAVHPGIVKT 3
           AKE+AR+L+ +   VT+NAVHPGIVKT
Sbjct: 242 AKEMARQLKARNARVTINAVHPGIVKT 268


>ref|XP_004138098.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like
           [Cucumis sativus]
          Length = 346

 Score =  176 bits (447), Expect = 1e-42
 Identities = 90/147 (61%), Positives = 107/147 (72%)
 Frame = -2

Query: 443 LCSFSSIRRFCSMFXXXXXXXXXXXXNAGKFSNKLESSEDKVETTFATNYLGHFXXXXXX 264
           L S +S++ FC+ F            NAG FS  LE SEDKVE TFATNYLGH+      
Sbjct: 113 LSSLASVQSFCNQFLSLGLPLNILINNAGVFSKNLEFSEDKVELTFATNYLGHYLLTERL 172

Query: 263 XEKMVETAAETGIQGRIVNVSSVIHSWAKRRHFCFKQMVQPNSYNGTRAYAQSKLAIILH 84
            EKM+ETAA+TGI+GRI+NVSSV+H W K+    F+QM+ PNSYNGTRAYAQSKLA ILH
Sbjct: 173 LEKMIETAAKTGIEGRIINVSSVVHGWVKKDGLSFRQMLNPNSYNGTRAYAQSKLANILH 232

Query: 83  AKELARRLQLQKVNVTVNAVHPGIVKT 3
           AKEL+R+LQ +   VT+NAVHPGIVKT
Sbjct: 233 AKELSRQLQGRNARVTINAVHPGIVKT 259


>ref|XP_002322183.1| predicted protein [Populus trichocarpa] gi|222869179|gb|EEF06310.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score =  176 bits (446), Expect = 2e-42
 Identities = 88/147 (59%), Positives = 108/147 (73%)
 Frame = -2

Query: 443 LCSFSSIRRFCSMFXXXXXXXXXXXXNAGKFSNKLESSEDKVETTFATNYLGHFXXXXXX 264
           + SF S++RFCS F            NAG +S KLE SEDK+E TFATNYLGH+      
Sbjct: 97  MSSFVSVKRFCSGFLALGLPLNILINNAGIYSQKLEFSEDKIEMTFATNYLGHYLMTELL 156

Query: 263 XEKMVETAAETGIQGRIVNVSSVIHSWAKRRHFCFKQMVQPNSYNGTRAYAQSKLAIILH 84
            EKM+ETA +TGIQGRI+N+SSVIHSW KR  FC ++M+ P SY+GTRAY+QSKLA ILH
Sbjct: 157 LEKMIETAEQTGIQGRIINLSSVIHSWVKRDAFCLQKMLSPKSYDGTRAYSQSKLANILH 216

Query: 83  AKELARRLQLQKVNVTVNAVHPGIVKT 3
            KE+AR+L+ +   VT+NAVHPGIVKT
Sbjct: 217 VKEIARQLRARNARVTINAVHPGIVKT 243


>ref|XP_003601227.1| Retinol dehydrogenase [Medicago truncatula]
           gi|355490275|gb|AES71478.1| Retinol dehydrogenase
           [Medicago truncatula]
          Length = 332

 Score =  174 bits (441), Expect = 7e-42
 Identities = 89/147 (60%), Positives = 106/147 (72%)
 Frame = -2

Query: 443 LCSFSSIRRFCSMFXXXXXXXXXXXXNAGKFSNKLESSEDKVETTFATNYLGHFXXXXXX 264
           L SF S++RFCS F            NAG FS  LE S +K+E TFATNYLGHF      
Sbjct: 97  LSSFCSVQRFCSDFLALDLPLNILINNAGVFSQDLEFSAEKIEMTFATNYLGHFLLTEML 156

Query: 263 XEKMVETAAETGIQGRIVNVSSVIHSWAKRRHFCFKQMVQPNSYNGTRAYAQSKLAIILH 84
            +KM+ET+ +T IQGRI+NVSSVIHSW KR  FCFK ++   +YNGTRAYAQSKLA ILH
Sbjct: 157 LDKMIETSKKTDIQGRIINVSSVIHSWVKRHGFCFKDILNGKNYNGTRAYAQSKLANILH 216

Query: 83  AKELARRLQLQKVNVTVNAVHPGIVKT 3
           AKE+AR+L+ +K  VT+NAVHPGIVKT
Sbjct: 217 AKEIARQLKARKARVTMNAVHPGIVKT 243


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