BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029315
         (1409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indi...   437   e-120
ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group] g...   431   e-118
gb|ABF94034.1| retrotransposon protein, putative, unclassified [...   423   e-116
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   403   e-110
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   403   e-110

>gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indica Group]
          Length = 1427

 Score =  437 bits (1123), Expect = e-120
 Identities = 210/372 (56%), Positives = 272/372 (73%)
 Frame = -3

Query: 1404 QETKVYRLLKALYGLRQAPRAWYTQLNKCLLRLGFVKCPYEHAVYTRREGSESLILGVYV 1225
            +E  V RL KALYGLRQAPRAW T+L+KCL  LGF +C  E AVYTR +G   +I+GVYV
Sbjct: 1050 EEHLVLRLSKALYGLRQAPRAWNTRLDKCLKELGFARCTQEQAVYTRGKGQAGVIVGVYV 1109

Query: 1224 DDLLITGTNVANIVRFKRQMAREFDMTDLGTLSYYLGLEVEQRKGSIEVKQAAYARKVLE 1045
            DDL++TG N   I  FK+QM  EF+M+DLG LSYYLG+EV Q +  I +KQAAYA+K+L 
Sbjct: 1110 DDLIVTGENPQEIAMFKQQMMGEFEMSDLGLLSYYLGIEVIQGENGIAIKQAAYAKKILS 1169

Query: 1044 KAGMSQCNPVKYPMEHKIQLTKDEGGEPVDPTQFKSMVGGLRYLVHTRPDIAYVVGVISR 865
            + GM  CNP   PME +  L KD  G P+D T+++ ++G LRYL+HTRPD++Y VGV SR
Sbjct: 1170 QFGMQGCNPTSIPMEPRSLLHKDADGNPIDATEYRRVIGCLRYLLHTRPDLSYAVGVASR 1229

Query: 864  YMERPTTLHFNAAKRILRYVKGTINFGLVYTKGRGNYLLAGFSDSDLAGSVEDRRSTGGM 685
            +MERPTT+H  A K ILRY+KGT++ GLV+  G G+  + GF+DSDLAG ++DRRSTGGM
Sbjct: 1230 FMERPTTMHLKAVKMILRYLKGTLDSGLVFASGSGSLDITGFTDSDLAGDMDDRRSTGGM 1289

Query: 684  VFYLDESLITWISQKQRCVALSTCEXXXXXXXXXXXXAIWLQRVLNQISDVKVGPVTLYI 505
             FY++ SL++W SQKQ+ VALS+CE            A+WL+ +L+++   +  PV L++
Sbjct: 1290 AFYVNSSLVSWCSQKQKTVALSSCEAEFMAATAAACHALWLRALLSEMMGTEAKPVKLFV 1349

Query: 504  DNKSAVDLAKNPLFHGRSKHIDVRYHFIRECVEQGLIVIKHISTGEQRADILTKALSAVK 325
            DNKSA+ L KNP+FHGRSKHID RYHFIRECVE G I+I+ +S+ EQRAD +TK L A K
Sbjct: 1350 DNKSAIALMKNPVFHGRSKHIDTRYHFIRECVESGQILIEFVSSEEQRADAMTKGLPAAK 1409

Query: 324  FEKMRKLLGVEE 289
                R LLGV +
Sbjct: 1410 LATARHLLGVRD 1421


>ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group]
            gi|113622864|dbj|BAF22809.1| Os08g0125300 [Oryza sativa
            Japonica Group] gi|215701150|dbj|BAG92574.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 1427

 Score =  431 bits (1108), Expect = e-118
 Identities = 208/372 (55%), Positives = 270/372 (72%)
 Frame = -3

Query: 1404 QETKVYRLLKALYGLRQAPRAWYTQLNKCLLRLGFVKCPYEHAVYTRREGSESLILGVYV 1225
            +E  V RL KALYGLRQAPRAW T+L+KCL  LGF +C  E AVYTR +G   +I+GVYV
Sbjct: 1050 EEHLVLRLSKALYGLRQAPRAWNTRLDKCLKELGFARCTQEQAVYTRGKGQAGVIVGVYV 1109

Query: 1224 DDLLITGTNVANIVRFKRQMAREFDMTDLGTLSYYLGLEVEQRKGSIEVKQAAYARKVLE 1045
            DDL++TG N   I  FK+QM  EF+M+DLG LSYYLG+EV Q +  I +KQAAYA+K+L 
Sbjct: 1110 DDLIVTGENPHEIAMFKQQMMGEFEMSDLGLLSYYLGIEVIQGENGIAIKQAAYAKKILS 1169

Query: 1044 KAGMSQCNPVKYPMEHKIQLTKDEGGEPVDPTQFKSMVGGLRYLVHTRPDIAYVVGVISR 865
            + GM  CNP   PME +  L KD  G P+D T+++ ++G LRYL+HTRPD++Y VGV SR
Sbjct: 1170 QFGMQGCNPTSIPMEPRSLLHKDADGNPIDATEYRRVIGCLRYLLHTRPDLSYAVGVASR 1229

Query: 864  YMERPTTLHFNAAKRILRYVKGTINFGLVYTKGRGNYLLAGFSDSDLAGSVEDRRSTGGM 685
            +MERPTT+H  A K ILRY+KGT++ GLV+  G G+  + GF+DSDLAG ++DRRSTGGM
Sbjct: 1230 FMERPTTMHLKAVKMILRYLKGTLDSGLVFASGSGSLDITGFTDSDLAGDMDDRRSTGGM 1289

Query: 684  VFYLDESLITWISQKQRCVALSTCEXXXXXXXXXXXXAIWLQRVLNQISDVKVGPVTLYI 505
             FY++ SL++W SQKQ+ VALS+CE            A+WL+ +L+++   +   V L++
Sbjct: 1290 AFYVNSSLVSWCSQKQKTVALSSCEAEFMAATAAACHALWLRALLSEMMGTEAKRVKLFV 1349

Query: 504  DNKSAVDLAKNPLFHGRSKHIDVRYHFIRECVEQGLIVIKHISTGEQRADILTKALSAVK 325
            DNKSA+ L KNP+FHGRSKHID RYHFIRECVE G I+I+ + + EQRAD +TK L A K
Sbjct: 1350 DNKSAIALMKNPVFHGRSKHIDTRYHFIRECVESGQILIEFVRSEEQRADAMTKGLPAAK 1409

Query: 324  FEKMRKLLGVEE 289
                R LLGV +
Sbjct: 1410 LATARHLLGVRD 1421


>gb|ABF94034.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1409

 Score =  423 bits (1088), Expect = e-116
 Identities = 202/370 (54%), Positives = 273/370 (73%)
 Frame = -3

Query: 1404 QETKVYRLLKALYGLRQAPRAWYTQLNKCLLRLGFVKCPYEHAVYTRREGSESLILGVYV 1225
            +E  V +L KALYGLRQAPRAW  +L++ L  LGF +C  E AVYTR  GS+ +I+GVYV
Sbjct: 1032 KEHLVLKLHKALYGLRQAPRAWNIRLDRSLRELGFDRCTQEQAVYTRGRGSDGIIVGVYV 1091

Query: 1224 DDLLITGTNVANIVRFKRQMAREFDMTDLGTLSYYLGLEVEQRKGSIEVKQAAYARKVLE 1045
            DDL++TG N + +  FK QM  EF+M+DLG L+YYLG+EV+Q + +  +KQ AYA+K+L 
Sbjct: 1092 DDLIVTGENPSELKVFKEQMMGEFEMSDLGLLTYYLGIEVDQDESATTLKQTAYAKKLLS 1151

Query: 1044 KAGMSQCNPVKYPMEHKIQLTKDEGGEPVDPTQFKSMVGGLRYLVHTRPDIAYVVGVISR 865
            + GM +CN V  P++ + QL+KD  G PVD T+++ ++G LRYL+HTRPD++Y VGV SR
Sbjct: 1152 QFGMMECNSVSIPIDPRSQLSKDPEGHPVDATEYRRIIGSLRYLLHTRPDLSYAVGVASR 1211

Query: 864  YMERPTTLHFNAAKRILRYVKGTINFGLVYTKGRGNYLLAGFSDSDLAGSVEDRRSTGGM 685
            +MERPT +HF A K+ILRY+KGT+++GLVY  G G   + G++DSDLAG ++DRRSTGGM
Sbjct: 1212 FMERPTVMHFKAVKQILRYIKGTMDYGLVYAAGTGALKITGYTDSDLAGDLDDRRSTGGM 1271

Query: 684  VFYLDESLITWISQKQRCVALSTCEXXXXXXXXXXXXAIWLQRVLNQISDVKVGPVTLYI 505
             FY+++SL+ W SQKQ+ VALS+CE            A+WL+ +L +++ V+   V L++
Sbjct: 1272 AFYINQSLVAWSSQKQKTVALSSCEAEFMAATTAACQALWLRLLLAEVAGVEEKAVKLFV 1331

Query: 504  DNKSAVDLAKNPLFHGRSKHIDVRYHFIRECVEQGLIVIKHISTGEQRADILTKALSAVK 325
            DN+SA+ L KNP+FHGRSKHID RYHFIRECV+ G IV++ + T EQRAD LTK L A K
Sbjct: 1332 DNRSAIALMKNPVFHGRSKHIDTRYHFIRECVDGGQIVVEFVRTEEQRADALTKGLPAAK 1391

Query: 324  FEKMRKLLGV 295
                R LLGV
Sbjct: 1392 LVTARHLLGV 1401


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  403 bits (1035), Expect = e-110
 Identities = 200/374 (53%), Positives = 262/374 (70%)
 Frame = -3

Query: 1404 QETKVYRLLKALYGLRQAPRAWYTQLNKCLLRLGFVKCPYEHAVYTRREGSESLILGVYV 1225
            +E KV RL KALYGL+QAPRAW T+++K      F+KCPYEHA+Y + +  + LI  +YV
Sbjct: 973  EEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYV 1032

Query: 1224 DDLLITGTNVANIVRFKRQMAREFDMTDLGTLSYYLGLEVEQRKGSIEVKQAAYARKVLE 1045
            DDL+ TG N +    FK++M +EF+MTD+G +SYYLG+EV+Q    I + Q  YA++VL+
Sbjct: 1033 DDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLK 1092

Query: 1044 KAGMSQCNPVKYPMEHKIQLTKDEGGEPVDPTQFKSMVGGLRYLVHTRPDIAYVVGVISR 865
            K  M   NPV  PME  I+L+K E GE VDPT FKS+VG LRYL  TRPDI Y VGV+SR
Sbjct: 1093 KFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSR 1152

Query: 864  YMERPTTLHFNAAKRILRYVKGTINFGLVYTKGRGNYLLAGFSDSDLAGSVEDRRSTGGM 685
            YME PTT HF AAKRILRY+KGT+NFGL Y+    +Y L G+SDSD  G V+DR+ST G 
Sbjct: 1153 YMEHPTTTHFKAAKRILRYIKGTVNFGLHYST-TSDYKLVGYSDSDWGGDVDDRKSTSGF 1211

Query: 684  VFYLDESLITWISQKQRCVALSTCEXXXXXXXXXXXXAIWLQRVLNQISDVKVGPVTLYI 505
            VFY+ ++  TW+S+KQ  V LSTCE            AIWL+ +L ++S  +  P  +++
Sbjct: 1212 VFYIGDTAFTWMSKKQPIVVLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFV 1271

Query: 504  DNKSAVDLAKNPLFHGRSKHIDVRYHFIRECVEQGLIVIKHISTGEQRADILTKALSAVK 325
            DNKSA+ LAKNP+FH RSKHID RYH+IRECV +  + ++++ T +Q ADI TK L    
Sbjct: 1272 DNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKRED 1331

Query: 324  FEKMRKLLGVEETT 283
            F KMR LLGV +++
Sbjct: 1332 FIKMRSLLGVAKSS 1345


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  403 bits (1035), Expect = e-110
 Identities = 200/374 (53%), Positives = 262/374 (70%)
 Frame = -3

Query: 1404 QETKVYRLLKALYGLRQAPRAWYTQLNKCLLRLGFVKCPYEHAVYTRREGSESLILGVYV 1225
            +E KV RL KALYGL+QAPRAW T+++K      F+KCPYEHA+Y + +  + LI  +YV
Sbjct: 941  EEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYV 1000

Query: 1224 DDLLITGTNVANIVRFKRQMAREFDMTDLGTLSYYLGLEVEQRKGSIEVKQAAYARKVLE 1045
            DDL+ TG N +    FK++M +EF+MTD+G +SYYLG+EV+Q    I + Q  YA++VL+
Sbjct: 1001 DDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLK 1060

Query: 1044 KAGMSQCNPVKYPMEHKIQLTKDEGGEPVDPTQFKSMVGGLRYLVHTRPDIAYVVGVISR 865
            K  M   NPV  PME  I+L+K E GE VDPT FKS+VG LRYL  TRPDI Y VGV+SR
Sbjct: 1061 KFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSR 1120

Query: 864  YMERPTTLHFNAAKRILRYVKGTINFGLVYTKGRGNYLLAGFSDSDLAGSVEDRRSTGGM 685
            YME PTT HF AAKRILRY+KGT+NFGL Y+    +Y L G+SDSD  G V+DR+ST G 
Sbjct: 1121 YMEHPTTTHFKAAKRILRYIKGTVNFGLHYST-TSDYKLVGYSDSDWGGDVDDRKSTSGF 1179

Query: 684  VFYLDESLITWISQKQRCVALSTCEXXXXXXXXXXXXAIWLQRVLNQISDVKVGPVTLYI 505
            VFY+ ++  TW+S+KQ  V LSTCE            AIWL+ +L ++S  +  P  +++
Sbjct: 1180 VFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFV 1239

Query: 504  DNKSAVDLAKNPLFHGRSKHIDVRYHFIRECVEQGLIVIKHISTGEQRADILTKALSAVK 325
            DNKSA+ LAKNP+FH RSKHID RYH+IRECV +  + ++++ T +Q ADI TK L    
Sbjct: 1240 DNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKRED 1299

Query: 324  FEKMRKLLGVEETT 283
            F KMR LLGV +++
Sbjct: 1300 FIKMRSLLGVAKSS 1313