BLASTX nr result

ID: Bupleurum21_contig00029312 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029312
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511315.1| thyroid hormone receptor interactor, putativ...   166   2e-39
ref|XP_002318075.1| predicted protein [Populus trichocarpa] gi|1...   162   3e-38
ref|XP_004152492.1| PREDICTED: pachytene checkpoint protein 2 ho...   159   2e-37
ref|XP_002280358.1| PREDICTED: pachytene checkpoint protein 2 ho...   155   4e-36
ref|XP_003526996.1| PREDICTED: pachytene checkpoint protein 2 ho...   154   9e-36

>ref|XP_002511315.1| thyroid hormone receptor interactor, putative [Ricinus communis]
           gi|223550430|gb|EEF51917.1| thyroid hormone receptor
           interactor, putative [Ricinus communis]
          Length = 460

 Score =  166 bits (420), Expect = 2e-39
 Identities = 89/111 (80%), Positives = 99/111 (89%)
 Frame = +2

Query: 2   EPSDSIRVVNALLTQMDKLKSSPNVIVLTTSNITAAIDIAFVDRADIKAYVGPPTLQARY 181
           EPSDSIRVVNALLTQMDKLK SPNVI+LTTSNITAAIDIAFVDRADIKAYVGPPTLQARY
Sbjct: 292 EPSDSIRVVNALLTQMDKLKCSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARY 351

Query: 182 EILRSCLQELLRTGILSYSQMQNEGSLKSLPNYCSLKEKLSVAVAQESQTP 334
           EILRSCLQEL+RTGI+  S  Q+  +L  LPNY +LKEK++ + AQE+QTP
Sbjct: 352 EILRSCLQELIRTGII--SNFQDPDNL-VLPNYPTLKEKMNGSAAQEAQTP 399


>ref|XP_002318075.1| predicted protein [Populus trichocarpa] gi|118485393|gb|ABK94553.1|
           unknown [Populus trichocarpa]
           gi|222858748|gb|EEE96295.1| predicted protein [Populus
           trichocarpa]
          Length = 465

 Score =  162 bits (409), Expect = 3e-38
 Identities = 86/109 (78%), Positives = 94/109 (86%)
 Frame = +2

Query: 2   EPSDSIRVVNALLTQMDKLKSSPNVIVLTTSNITAAIDIAFVDRADIKAYVGPPTLQARY 181
           EPSDSIRVVNALLTQMDKLK+SPNVI+LTTSNITAAIDIAFVDRADIKAYVGPPTLQARY
Sbjct: 296 EPSDSIRVVNALLTQMDKLKTSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARY 355

Query: 182 EILRSCLQELLRTGILSYSQMQNEGSLKSLPNYCSLKEKLSVAVAQESQ 328
           EILRSCLQELLRTGI+S  Q   +     LPNY +L+EKL+    QE+Q
Sbjct: 356 EILRSCLQELLRTGIISNFQ---DSDYLMLPNYSTLREKLNAPDIQEAQ 401


>ref|XP_004152492.1| PREDICTED: pachytene checkpoint protein 2 homolog [Cucumis sativus]
           gi|449487740|ref|XP_004157777.1| PREDICTED: pachytene
           checkpoint protein 2 homolog [Cucumis sativus]
          Length = 456

 Score =  159 bits (403), Expect = 2e-37
 Identities = 83/111 (74%), Positives = 94/111 (84%)
 Frame = +2

Query: 2   EPSDSIRVVNALLTQMDKLKSSPNVIVLTTSNITAAIDIAFVDRADIKAYVGPPTLQARY 181
           EPSDSIRVVNALLTQ+DKLKSSPNV++LTTSNITAAIDIAFVDRADIKAYVGPPTLQARY
Sbjct: 288 EPSDSIRVVNALLTQIDKLKSSPNVVILTTSNITAAIDIAFVDRADIKAYVGPPTLQARY 347

Query: 182 EILRSCLQELLRTGILSYSQMQNEGSLKSLPNYCSLKEKLSVAVAQESQTP 334
           EILRSCLQEL+RTGILS S+  +      LPNY  LKEK+++   ++   P
Sbjct: 348 EILRSCLQELIRTGILSTSEGCDH---SMLPNYAGLKEKVNIPETEKVDVP 395


>ref|XP_002280358.1| PREDICTED: pachytene checkpoint protein 2 homolog [Vitis vinifera]
           gi|297733699|emb|CBI14946.3| unnamed protein product
           [Vitis vinifera]
          Length = 455

 Score =  155 bits (391), Expect = 4e-36
 Identities = 84/107 (78%), Positives = 92/107 (85%)
 Frame = +2

Query: 2   EPSDSIRVVNALLTQMDKLKSSPNVIVLTTSNITAAIDIAFVDRADIKAYVGPPTLQARY 181
           EPSDSIRVVNALLTQ+DKLKSSPNVI+LTTSNITAAIDIAFVDRADIKAYVGPPT+ ARY
Sbjct: 286 EPSDSIRVVNALLTQLDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTIHARY 345

Query: 182 EILRSCLQELLRTGILSYSQMQNEGSLKSLPNYCSLKEKLSVAVAQE 322
           EILRSCLQEL+R GIL+ SQ   E    SL +Y  LKEKL+VA  +E
Sbjct: 346 EILRSCLQELVRAGILTNSQ---ECDRLSLLSYTGLKEKLNVAQIEE 389


>ref|XP_003526996.1| PREDICTED: pachytene checkpoint protein 2 homolog [Glycine max]
          Length = 448

 Score =  154 bits (388), Expect = 9e-36
 Identities = 83/110 (75%), Positives = 90/110 (81%)
 Frame = +2

Query: 2   EPSDSIRVVNALLTQMDKLKSSPNVIVLTTSNITAAIDIAFVDRADIKAYVGPPTLQARY 181
           EPSDSIRVVNALLTQMDKLKSSPNVI+LTTSNITAAIDIAFVDRADIKAYVGPPTLQARY
Sbjct: 280 EPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARY 339

Query: 182 EILRSCLQELLRTGILSYSQMQNEGSLKSLPNYCSLKEKLSVAVAQESQT 331
           EILRSCLQEL+RTGIL+  Q   +      PNY S K++L+     E  T
Sbjct: 340 EILRSCLQELMRTGILTSLQ---DCKNVMFPNYASAKDRLNTPDFHEDAT 386


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