BLASTX nr result

ID: Bupleurum21_contig00029304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029304
         (860 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314720.1| predicted protein [Populus trichocarpa] gi|2...   268   2e-69
emb|CBI32011.3| unnamed protein product [Vitis vinifera]              261   2e-67
ref|XP_002270296.1| PREDICTED: uncharacterized protein LOC100258...   261   2e-67
ref|XP_003530687.1| PREDICTED: uncharacterized protein LOC100800...   248   1e-63
ref|XP_002871929.1| zinc knuckle (CCHC-type) family protein [Ara...   244   2e-62

>ref|XP_002314720.1| predicted protein [Populus trichocarpa] gi|222863760|gb|EEF00891.1|
           predicted protein [Populus trichocarpa]
          Length = 259

 Score =  268 bits (684), Expect = 2e-69
 Identities = 128/185 (69%), Positives = 144/185 (77%), Gaps = 2/185 (1%)
 Frame = +1

Query: 1   SLNARTGLFSKRMKIIHGDPMLHAQRVAAIKRAKGTTDARKHASDTMKDFFRDPENRRKR 180
           SLNA+TGLFSKRMKIIH DPMLHAQRVAAIK+AKGT  ARK AS+T+K FF DPENR+KR
Sbjct: 75  SLNAKTGLFSKRMKIIHRDPMLHAQRVAAIKKAKGTAAARKRASETLKAFFSDPENRKKR 134

Query: 181 SISMKGIKFYCKNCGCEGHRKHYCPELKDNLVDRRFKCRLCGETGHNRRTCPLSRSNVSG 360
           SI+MKG+KFYC NCG EGHRKHYCPELKD+LVDRRFKCRLCG+ GHNRRTCP SR +   
Sbjct: 135 SIAMKGVKFYCSNCGREGHRKHYCPELKDSLVDRRFKCRLCGKKGHNRRTCPKSRMSNHK 194

Query: 361 NKIPKNHRCRICGQSGHNRRTCHQ--NVKEEVITPIKALSNIEKRTCTCRLCLKKGHNIR 534
            K+  +HRCRIC Q GHNRR+C Q   +K       K       R  TCRLC +KGHN R
Sbjct: 195 GKVTWHHRCRICRQGGHNRRSCPQVVGIKFGGSDTFKGFMVSGSRKYTCRLCREKGHNAR 254

Query: 535 TCPSK 549
           TCPS+
Sbjct: 255 TCPSR 259


>emb|CBI32011.3| unnamed protein product [Vitis vinifera]
          Length = 377

 Score =  261 bits (666), Expect = 2e-67
 Identities = 125/185 (67%), Positives = 144/185 (77%), Gaps = 2/185 (1%)
 Frame = +1

Query: 1   SLNARTGLFSKRMKIIHGDPMLHAQRVAAIKRAKGTTDARKHASDTMKDFFRDPENRRKR 180
           SLNA+TGLFSKRMKIIH DP LHAQRVAAIK+AKGT  ARK AS+ +K FFRDPENRRKR
Sbjct: 191 SLNAKTGLFSKRMKIIHRDPKLHAQRVAAIKKAKGTAAARKRASEALKAFFRDPENRRKR 250

Query: 181 SISMKGIKFYCKNCGCEGHRKHYCPELKDNLVDRRFKCRLCGETGHNRRTCPLSRSNVSG 360
           SI+MKG KFYCKNCG EGHR+HYCPEL ++ VDRRF+CRLCGE GHNRRTC  SR + + 
Sbjct: 251 SIAMKGAKFYCKNCGREGHRRHYCPELANSSVDRRFRCRLCGEKGHNRRTCRRSRESGTR 310

Query: 361 NKIPKNHRCRICGQSGHNRRTCHQ--NVKEEVITPIKALSNIEKRTCTCRLCLKKGHNIR 534
           + + ++H CRICG SGHNRRTC Q   +K +     +       R   CRLCL+KGHNIR
Sbjct: 311 STVSRHHHCRICGHSGHNRRTCPQGTGLKLDAGGTNRGSLISGSRIYACRLCLEKGHNIR 370

Query: 535 TCPSK 549
           TCPSK
Sbjct: 371 TCPSK 375


>ref|XP_002270296.1| PREDICTED: uncharacterized protein LOC100258796 [Vitis vinifera]
          Length = 387

 Score =  261 bits (666), Expect = 2e-67
 Identities = 125/185 (67%), Positives = 144/185 (77%), Gaps = 2/185 (1%)
 Frame = +1

Query: 1   SLNARTGLFSKRMKIIHGDPMLHAQRVAAIKRAKGTTDARKHASDTMKDFFRDPENRRKR 180
           SLNA+TGLFSKRMKIIH DP LHAQRVAAIK+AKGT  ARK AS+ +K FFRDPENRRKR
Sbjct: 201 SLNAKTGLFSKRMKIIHRDPKLHAQRVAAIKKAKGTAAARKRASEALKAFFRDPENRRKR 260

Query: 181 SISMKGIKFYCKNCGCEGHRKHYCPELKDNLVDRRFKCRLCGETGHNRRTCPLSRSNVSG 360
           SI+MKG KFYCKNCG EGHR+HYCPEL ++ VDRRF+CRLCGE GHNRRTC  SR + + 
Sbjct: 261 SIAMKGAKFYCKNCGREGHRRHYCPELANSSVDRRFRCRLCGEKGHNRRTCRRSRESGTR 320

Query: 361 NKIPKNHRCRICGQSGHNRRTCHQ--NVKEEVITPIKALSNIEKRTCTCRLCLKKGHNIR 534
           + + ++H CRICG SGHNRRTC Q   +K +     +       R   CRLCL+KGHNIR
Sbjct: 321 STVSRHHHCRICGHSGHNRRTCPQGTGLKLDAGGTNRGSLISGSRIYACRLCLEKGHNIR 380

Query: 535 TCPSK 549
           TCPSK
Sbjct: 381 TCPSK 385


>ref|XP_003530687.1| PREDICTED: uncharacterized protein LOC100800156 [Glycine max]
          Length = 405

 Score =  248 bits (633), Expect = 1e-63
 Identities = 118/183 (64%), Positives = 139/183 (75%)
 Frame = +1

Query: 1   SLNARTGLFSKRMKIIHGDPMLHAQRVAAIKRAKGTTDARKHASDTMKDFFRDPENRRKR 180
           SLNA+TGLFS RMKIIH DP L AQRVAAIK+AKGT  ARKH S  MK +F DP NR+KR
Sbjct: 216 SLNAKTGLFSNRMKIIHQDPKLQAQRVAAIKKAKGTVAARKHTSKIMKAYFSDPVNRQKR 275

Query: 181 SISMKGIKFYCKNCGCEGHRKHYCPELKDNLVDRRFKCRLCGETGHNRRTCPLSRSNVSG 360
           S++MKG+KFYC+NCG EGHR+HYCPEL D+LVDRRF CRLCG  GHNRRTC   + ++S 
Sbjct: 276 SMAMKGVKFYCQNCGREGHRRHYCPELNDSLVDRRFTCRLCGGKGHNRRTCRKLKISLSN 335

Query: 361 NKIPKNHRCRICGQSGHNRRTCHQNVKEEVITPIKALSNIEKRTCTCRLCLKKGHNIRTC 540
            +  K+H+C+IC Q GHNRRTC Q V   V  P K  +   +R   CRLC K+GHNIRTC
Sbjct: 336 GRTIKHHQCKICHQFGHNRRTCPQAVPFAV--PSKRRNAASRRPYKCRLCKKEGHNIRTC 393

Query: 541 PSK 549
           PS+
Sbjct: 394 PSR 396


>ref|XP_002871929.1| zinc knuckle (CCHC-type) family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297317766|gb|EFH48188.1| zinc knuckle
           (CCHC-type) family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 404

 Score =  244 bits (623), Expect = 2e-62
 Identities = 118/188 (62%), Positives = 141/188 (75%), Gaps = 5/188 (2%)
 Frame = +1

Query: 1   SLNARTGLFSKRMKIIHGDPMLHAQRVAAIKRAKGTTDARKHASDTMKDFFRDPENRRKR 180
           SLNA+TGLFSKRMKIIH DP+LHAQRVAAIK+AKGT  ARKHAS++MK FF DP+NR +R
Sbjct: 207 SLNAKTGLFSKRMKIIHRDPVLHAQRVAAIKKAKGTPAARKHASESMKAFFSDPDNREQR 266

Query: 181 SISMKGIKFYCKNCGCEGHRKHYCPELKDNLVDRRFKCRLCGETGHNRRTCPLSRSNVSG 360
           S+SMKG+KFYCKNCG EGHR+HYCPEL  N  DRRF+CR CG  GHNRRTCP S+S V+ 
Sbjct: 267 SLSMKGVKFYCKNCGQEGHRRHYCPELGTN-ADRRFRCRGCGGKGHNRRTCPKSKSMVTK 325

Query: 361 NKIPKNHRCRICGQSGHNRRTCHQNVKEEVITPI-----KALSNIEKRTCTCRLCLKKGH 525
               ++H+C ICG+SGHN RTC   +K   + P       +   + +R   CR C K GH
Sbjct: 326 GISTRHHQCGICGESGHNSRTC---LKPTGVRPSGPGGDSSGDGVGRRRYACRFCNKMGH 382

Query: 526 NIRTCPSK 549
           N+RTCPSK
Sbjct: 383 NVRTCPSK 390


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