BLASTX nr result

ID: Bupleurum21_contig00029299 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029299
         (1007 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511774.1| conserved hypothetical protein [Ricinus comm...   302   7e-80
ref|XP_002320751.1| predicted protein [Populus trichocarpa] gi|2...   302   7e-80
ref|XP_003623813.1| Ataxin-10 [Medicago truncatula] gi|355498828...   290   4e-76
ref|XP_002274705.1| PREDICTED: uncharacterized protein LOC100264...   287   3e-75
ref|XP_003533665.1| PREDICTED: LOW QUALITY PROTEIN: ataxin-10-li...   280   5e-73

>ref|XP_002511774.1| conserved hypothetical protein [Ricinus communis]
            gi|223548954|gb|EEF50443.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 497

 Score =  302 bits (774), Expect = 7e-80
 Identities = 162/328 (49%), Positives = 208/328 (63%), Gaps = 12/328 (3%)
 Frame = +1

Query: 55   CAGEIINQNSFIEQNGLGXXXXXXXXXXXXXLDPD--IVRIGLQILGNVSLAGKEHQHAV 228
            CAGEI NQN F+  NG                +PD  I+R+GLQ+L NVSLAG++HQ A+
Sbjct: 78   CAGEITNQNCFVALNG-PEMVSTLLRSAGLVYEPDYGIIRLGLQVLANVSLAGEKHQQAI 136

Query: 229  WHQLFTLDFVAIAKIRKRGTCDPLCMILYTCLEGNIRLVSDICSEKGLPVLIEIIRTASV 408
            WH  F  +FV +AK R + TCDPLCMI+YTC +GN   V ++C ++GL V+ EI+RTASV
Sbjct: 137  WHWFFPDEFVVLAKNRSQSTCDPLCMIIYTCCDGNPGFVLELCGDRGLAVVAEIVRTASV 196

Query: 409  VGSGEDWFDLLISKLCIEESCLSPLFSKLL------QRDNTTSKSDQFEPEQAFLLSSLS 570
            VG GEDWF LL+S++C+EE     LFS           +  +S SD F  EQA+LLS++S
Sbjct: 197  VGYGEDWFKLLLSRICLEEEYFYKLFSCFYCAGDSENSEGISSSSDLFSTEQAYLLSTVS 256

Query: 571  KILNELISNISIFHDFALCVLGIFKKAAAVVNFTSRGISGLPTGSSEIDVLGYSLTILRD 750
            +ILNE + +IS+  DFA  V GIFK++  VV+F SRG SGLPTGS+ +DVLGYSLTILRD
Sbjct: 257  EILNERLEDISVSIDFAFYVFGIFKRSVGVVDFVSRGNSGLPTGSAAVDVLGYSLTILRD 316

Query: 751  ICACDGRGNIMEG----XXXXXXXXXXXXXXXXXXXXPPAIIRKAAGNGKLDEGTSSVSG 918
             CA  G+G +                           PP +I+KA    +  E  SS S 
Sbjct: 317  TCALHGKGGLYHSVDVVDTLLSNGLLELLLFVLHDLEPPPMIKKAMKQNENHEPASSRSY 376

Query: 919  KCCPYKGFRRDLVAVIGNCAYRRKHVQD 1002
            K CPYKGFRRD+VAVIGNCA++R +VQD
Sbjct: 377  KPCPYKGFRRDIVAVIGNCAFQRNNVQD 404


>ref|XP_002320751.1| predicted protein [Populus trichocarpa] gi|222861524|gb|EEE99066.1|
            predicted protein [Populus trichocarpa]
          Length = 496

 Score =  302 bits (774), Expect = 7e-80
 Identities = 161/329 (48%), Positives = 210/329 (63%), Gaps = 13/329 (3%)
 Frame = +1

Query: 55   CAGEIINQNSFIEQNGLGXXXXXXXXXXXXXLDPD--IVRIGLQILGNVSLAGKEHQHAV 228
            CAGE+ NQ SFI+ NG+G              +PD  I+R+GLQ+L NVSLAGKEHQ A+
Sbjct: 86   CAGEVANQKSFIQLNGVGIFLTVLRSKKVASSEPDHGIIRMGLQVLANVSLAGKEHQQAI 145

Query: 229  WHQLFTLDFVAIAKIRKRGTCDPLCMILYTCLEGNIRLVSDICSEKGLPVLIEIIRTASV 408
            W  LF  +   +AK+R +GTCDPLCMI+Y C +G+  LV  +C  +GLP+++EIIRTAS+
Sbjct: 146  WGGLFHDELYMLAKVRSQGTCDPLCMIIYACCDGSPELVLQLCGNQGLPIVVEIIRTASL 205

Query: 409  VGSGEDWFDLLISKLCIEESCLSPLFSKLL-------QRDNTTSKSDQFEPEQAFLLSSL 567
            VG GE+W  LL+S++C+E+     LFS++          +  +  S+ F  EQA+LL+ +
Sbjct: 206  VGFGEEWLKLLLSRICLEDIYFPQLFSRIYSVCSYCENGEEISLSSNPFFTEQAYLLNIV 265

Query: 568  SKILNELISNISIFHDFALCVLGIFKKAAAVVNFTSRGISGLPTGSSEIDVLGYSLTILR 747
            S+ILNE +  I+I +DFALC+ GIFKK+     F SR  S LPTG + IDVLGYSLTILR
Sbjct: 266  SEILNERLKEITILNDFALCIFGIFKKSVEAFEFGSRAESRLPTGFAVIDVLGYSLTILR 325

Query: 748  DICACD---GRGNIME-GXXXXXXXXXXXXXXXXXXXXPPAIIRKAAGNGKLDEGTSSVS 915
            DICA +   G+ ++++                      PP IIRKA       E T+S  
Sbjct: 326  DICANNGGVGKEDLVDVVDSLLSSGLLDLLLCLLRDLEPPKIIRKAMNQAGNQEATTSYF 385

Query: 916  GKCCPYKGFRRDLVAVIGNCAYRRKHVQD 1002
             K CPYKGFRRDLVAVIGNCAYRRKHVQD
Sbjct: 386  PKVCPYKGFRRDLVAVIGNCAYRRKHVQD 414


>ref|XP_003623813.1| Ataxin-10 [Medicago truncatula] gi|355498828|gb|AES80031.1| Ataxin-10
            [Medicago truncatula]
          Length = 491

 Score =  290 bits (742), Expect = 4e-76
 Identities = 159/325 (48%), Positives = 207/325 (63%), Gaps = 9/325 (2%)
 Frame = +1

Query: 55   CAGEIINQNSFIEQNGLGXXXXXXXXXXXXXLDPDIVRIGLQILGNVSLAGKEHQHAVWH 234
            CAGEI+NQN F+E +G+               D  +VR GLQ+L NV LAGKEHQ AVW 
Sbjct: 84   CAGEILNQNMFLENDGVFIVVSSILRSEVVGSDYMLVRWGLQVLANVCLAGKEHQKAVWD 143

Query: 235  QLFTLDFVAIAKIRKRGTCDPLCMILYTCLEGNIRLVSDICSEKGLPVLIEIIRTASVVG 414
            ++F + F+++A+I K+   DPLCM++YTC +GN +  S++CS+ G  VL+EI+RTAS   
Sbjct: 144  EMFPVGFLSVARIGKKEVNDPLCMVIYTCCDGNDQWFSEVCSDGGWNVLVEIVRTASSAS 203

Query: 415  SGEDWFDLLISKLCIEESCLSPLFSKLLQRD-----NTTSKSDQFEPEQAFLLSSLSKIL 579
             GEDW  LL+S++C+E+S L  LFSKL   D     +T +K DQF  EQAFLL  +S IL
Sbjct: 204  FGEDWIKLLLSRICLEDSQLRVLFSKLRFMDIPDGEDTKTKDDQFSSEQAFLLQIISDIL 263

Query: 580  NELISNISIFHDFALCVLGIFKKAAAVVNFTSRGISGLPTGSSEIDVLGYSLTILRDICA 759
            NE I +++I  + A  V GIFKK+  V+    RG SGLP+G +++DVLGYSLT+LRDICA
Sbjct: 264  NERIGDVTISLEVASFVYGIFKKSIGVLEHAVRGKSGLPSGITDVDVLGYSLTMLRDICA 323

Query: 760  CDG-RGNIMEG---XXXXXXXXXXXXXXXXXXXXPPAIIRKAAGNGKLDEGTSSVSGKCC 927
             D  RGN  +                        PP IIRK   + +  +G SS S K C
Sbjct: 324  HDSVRGNSEDTEVVDMLLSYGLIELVFILLGDLEPPTIIRKGMKHSENPDGASS-SSKPC 382

Query: 928  PYKGFRRDLVAVIGNCAYRRKHVQD 1002
            PYKGFRRD+VA+IGNC YRRKHVQD
Sbjct: 383  PYKGFRRDIVALIGNCVYRRKHVQD 407


>ref|XP_002274705.1| PREDICTED: uncharacterized protein LOC100264428 [Vitis vinifera]
          Length = 494

 Score =  287 bits (734), Expect = 3e-75
 Identities = 157/330 (47%), Positives = 206/330 (62%), Gaps = 14/330 (4%)
 Frame = +1

Query: 55   CAGEIINQNSFIEQNGLGXXXXXXXXXXXXXLDPD--IVRIGLQILGNVSLAGKEHQHAV 228
            CAGE+ NQN FIEQNG+               D D  I+R+GLQ+LGNVSLAG+ HQ AV
Sbjct: 83   CAGEMTNQNLFIEQNGVKAVSTILLSFVGLDSDSDYGIIRMGLQLLGNVSLAGERHQRAV 142

Query: 229  WHQLFTLDFVAIAKIRKRGTCDPLCMILYTCLEGNIRLVSDICSEKGLPVLIEIIRTASV 408
            WH  F   F+ IA++R   T DPLCM++YTC + +   +++IC ++GLP+L EI+RTAS 
Sbjct: 143  WHHFFPAGFLEIARVRTLETSDPLCMVIYTCFDQSHEFITEICGDQGLPILAEIVRTAST 202

Query: 409  VGSGEDWFDLLISKLCIEESCLSPLFSKLL------QRDNTTSKSDQFEPEQAFLLSSLS 570
            VG  EDW  LL+S++C+EES    LFSKL         ++   K D F  EQAFL+  ++
Sbjct: 203  VGFEEDWLKLLLSRICLEESHFPMLFSKLCPVGTSGNYESIEFKVDVFASEQAFLMDIVA 262

Query: 571  KILNELISNISIFHDFALCVLGIFKKAAAVVNFTSRGISGLPTGSSEIDVLGYSLTILRD 750
            +ILNE I+ +++  D ALCVLGI KK+A V++  S   SG   GS+ I+VL YSLTIL++
Sbjct: 263  EILNEQINKMTVSSDVALCVLGILKKSAGVLDSVSTCKSGFSAGSNAINVLKYSLTILKE 322

Query: 751  ICACDGR------GNIMEGXXXXXXXXXXXXXXXXXXXXPPAIIRKAAGNGKLDEGTSSV 912
            ICA D +      G++                       PPAIIRKA   G+  +G +S 
Sbjct: 323  ICARDAQKSSNEHGSVDVVDLLVSSGLLELLLCLLRDLEPPAIIRKAIKQGENQDGAASY 382

Query: 913  SGKCCPYKGFRRDLVAVIGNCAYRRKHVQD 1002
            S K  PY+GFRRDLVAVIGNCAYRRKHVQ+
Sbjct: 383  SPKHYPYRGFRRDLVAVIGNCAYRRKHVQN 412


>ref|XP_003533665.1| PREDICTED: LOW QUALITY PROTEIN: ataxin-10-like [Glycine max]
          Length = 494

 Score =  280 bits (715), Expect = 5e-73
 Identities = 160/325 (49%), Positives = 201/325 (61%), Gaps = 9/325 (2%)
 Frame = +1

Query: 55   CAGEIINQNSFIEQNGLGXXXXXXXXXXXXX-LDPDIVRIGLQILGNVSLAGKEHQHAVW 231
            CAGE  NQ+SF+E NG+                D  +VR GLQ+L NVSLAGK+HQ AVW
Sbjct: 89   CAGEAANQDSFLELNGVAVVCSVLRSEAASSGPDHGLVRWGLQVLANVSLAGKQHQCAVW 148

Query: 232  HQLFTLDFVAIAKIRKRGTCDPLCMILYTCLEGNIRLVSDICSEKGLPVLIEIIRTASVV 411
             +L    FV++A++  + TCDPLCM++YTC +GN      + SE G  V+ EI+RTAS  
Sbjct: 149  EELCLDGFVSLARLGTKETCDPLCMVIYTCCDGNPEWFKRLSSEDGRLVMAEIVRTASSA 208

Query: 412  GSGEDWFDLLISKLCIEESCLSPLFSKLLQRD---NTTSKSDQFEPEQAFLLSSLSKILN 582
              GEDW  LL+S++C+EES L  LFSKL   D    T SK D F  EQAFLL  LS+ILN
Sbjct: 209  SFGEDWLKLLLSRICLEESQLPVLFSKLQFADVPKVTESKDDHFSFEQAFLLRILSEILN 268

Query: 583  ELISNISIFHDFALCVLGIFKKAAAVVNFTSRGISGLPTGSSEIDVLGYSLTILRDICAC 762
            E + ++++  D AL V GIFKK+  V+   +RG SGLP+G   +DVLGYSLTILRD+CA 
Sbjct: 269  ERLKDVTVSKDVALFVFGIFKKSIGVLEHATRGKSGLPSGFVGVDVLGYSLTILRDVCAQ 328

Query: 763  DG-RGNIMEG----XXXXXXXXXXXXXXXXXXXXPPAIIRKAAGNGKLDEGTSSVSGKCC 927
            DG RGN  +                         PPAIIRK     + ++G +S S K C
Sbjct: 329  DGVRGNTEDSNDVVDVLLSYGLIVLLLCLLGALEPPAIIRKGLKRCEKEDG-ASCSIKPC 387

Query: 928  PYKGFRRDLVAVIGNCAYRRKHVQD 1002
            PYKGFRRD+VA+IGNC YRRKH QD
Sbjct: 388  PYKGFRRDIVALIGNCVYRRKHAQD 412


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