BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029287
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273255.1| PREDICTED: pentatricopeptide repeat-containi...    92   4e-17
ref|XP_002525196.1| pentatricopeptide repeat-containing protein,...    70   2e-10
ref|XP_004167767.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    65   7e-09
ref|XP_004142106.1| PREDICTED: pentatricopeptide repeat-containi...    65   7e-09
ref|XP_003554352.1| PREDICTED: pentatricopeptide repeat-containi...    65   7e-09

>ref|XP_002273255.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
            chloroplastic [Vitis vinifera]
            gi|297741486|emb|CBI32618.3| unnamed protein product
            [Vitis vinifera]
          Length = 842

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 56/112 (50%), Positives = 79/112 (70%), Gaps = 14/112 (12%)
 Frame = +1

Query: 1    KDDLSIILGVQEVVSSNTMHDA-VKDAIVKLLRDDLGLEVISAGTRDISLET-------- 153
            KDD+ IILG+++V ++   H++ VK AI+KLL+D+LGLEV  AG + I+L+         
Sbjct: 732  KDDILIILGIKKVDANLVEHESPVKGAIIKLLQDELGLEVAFAGPK-IALDKRINLGGPP 790

Query: 154  ----DFKNAVA-SRLPTRLKSPTRRPADLHRLKVTRKSLYNWLQKRLGASRG 294
                D++ A+  +RLPT L+S TRRPA L R KVTRKSL +WLQ+R+GA+RG
Sbjct: 791  GSDPDWQEALGRNRLPTELESSTRRPAVLQRFKVTRKSLDHWLQRRVGATRG 842


>ref|XP_002525196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535493|gb|EEF37162.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 786

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 50/108 (46%), Positives = 63/108 (58%), Gaps = 11/108 (10%)
 Frame = +1

Query: 1   KDDLSIILGVQEV-VSSNTMHDAVKDAIVKLLRDDLGLEVISAGTR-DISLETDFKNAVA 174
           KDD+SI LG+ +V V   T    VKDAI KLL ++LGLEV+    R    LETD +  + 
Sbjct: 679 KDDMSITLGIDKVDVLPATQKAEVKDAIFKLLHNELGLEVLIVVPRYTADLETDLEIPLN 738

Query: 175 S---------RLPTRLKSPTRRPADLHRLKVTRKSLYNWLQKRLGASR 291
           S         R   R+ S  RRP  L RLKVTR SL++WLQ++ GA R
Sbjct: 739 SYQNWSKSSGRENIRVSS-ARRPLVLQRLKVTRNSLHSWLQRKAGALR 785


>ref|XP_004167767.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At5g02830, chloroplastic-like [Cucumis sativus]
          Length = 855

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 44/101 (43%), Positives = 65/101 (64%), Gaps = 10/101 (9%)
 Frame = +1

Query: 1    KDDLSIILGVQEVVSSNTMHD-AVKDAIVKLLRDDLGLEVISAGTRDISLETDFKNAVAS 177
            KDD+ IIL V +V +     +  V+DAI +LL+D+LGLEV+  G   I+L+    N+ +S
Sbjct: 755  KDDIFIILEVNKVETDLVPQNFEVRDAITRLLQDELGLEVLPTGPT-IALDK-VPNSESS 812

Query: 178  RLP--TRLKSP-------TRRPADLHRLKVTRKSLYNWLQK 273
            ++   T+LK         TR+PAD+ RLKVT+KSL +WLQ+
Sbjct: 813  KISHTTKLKGTMGRNKYFTRKPADVQRLKVTKKSLQDWLQR 853


>ref|XP_004142106.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
            chloroplastic-like [Cucumis sativus]
          Length = 849

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 44/101 (43%), Positives = 65/101 (64%), Gaps = 10/101 (9%)
 Frame = +1

Query: 1    KDDLSIILGVQEVVSSNTMHD-AVKDAIVKLLRDDLGLEVISAGTRDISLETDFKNAVAS 177
            KDD+ IIL V +V +     +  V+DAI +LL+D+LGLEV+  G   I+L+    N+ +S
Sbjct: 749  KDDIFIILEVNKVETDLVPQNFEVRDAITRLLQDELGLEVLPTGPT-IALDK-VPNSESS 806

Query: 178  RLP--TRLKSP-------TRRPADLHRLKVTRKSLYNWLQK 273
            ++   T+LK         TR+PAD+ RLKVT+KSL +WLQ+
Sbjct: 807  KISHTTKLKGTMGRNKYFTRKPADVQRLKVTKKSLQDWLQR 847


>ref|XP_003554352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
            chloroplastic-like [Glycine max]
          Length = 811

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 43/100 (43%), Positives = 58/100 (58%), Gaps = 9/100 (9%)
 Frame = +1

Query: 4    DDLSIILGVQEVVSSNTMHDA-VKDAIVKLLRDDLGLEVISAGTRDISLET------DFK 162
            DD+ II+G  +V  + + H   V++AI+KLLR++LGLEV  A TR    +T      +F 
Sbjct: 712  DDILIIIGATKVDENPSKHILEVQEAIIKLLRNELGLEVFPAKTRLALSDTANLEYPNFS 771

Query: 163  NAVASRLP--TRLKSPTRRPADLHRLKVTRKSLYNWLQKR 276
            N      P    L   TRRP  L RLKVT+KSLY WL ++
Sbjct: 772  NLSIEAQPGENALGFQTRRPGVLVRLKVTKKSLYRWLHRK 811