BLASTX nr result

ID: Bupleurum21_contig00029276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029276
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305221.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18
emb|CAN75247.1| hypothetical protein VITISV_027237 [Vitis vinifera]    95   5e-18
ref|XP_003600698.1| hypothetical protein MTR_3g065210 [Medicago ...    82   3e-14
ref|XP_002302939.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_002870539.1| hypothetical protein ARALYDRAFT_493733 [Arab...    74   1e-11

>ref|XP_002305221.1| predicted protein [Populus trichocarpa] gi|222848185|gb|EEE85732.1|
           predicted protein [Populus trichocarpa]
          Length = 192

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 54/108 (50%), Positives = 68/108 (62%), Gaps = 3/108 (2%)
 Frame = +3

Query: 153 SPINFLMMERKKAKPKAIEDEFAIIKAAAWAWYERGSGSEGKPIREFDFTNTRKVLVPSR 332
           +P N + ME+KK K     D+ A++KAAAWAWY  GSGSEG+PI EFD T TR+   PSR
Sbjct: 5   TPFN-IFMEKKKPKGGGSTDDLALVKAAAWAWYHHGSGSEGRPICEFDVTRTRQAPRPSR 63

Query: 333 YKIEA---IKNTEMEEHHNSPSLMKMANTCHSFNSSLLDGYEIESISK 467
           YK+EA   +K   M     +PS ++  N       SLLD YE+ESISK
Sbjct: 64  YKLEATRTMKEDTMGSGSETPSPIRTDN-------SLLDKYEVESISK 104


>emb|CAN75247.1| hypothetical protein VITISV_027237 [Vitis vinifera]
          Length = 247

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 49/98 (50%), Positives = 63/98 (64%)
 Frame = +3

Query: 174 MERKKAKPKAIEDEFAIIKAAAWAWYERGSGSEGKPIREFDFTNTRKVLVPSRYKIEAIK 353
           MER+K++     D  A +KAAAWAWY+RGSGSEGKPI EF  T  R  L+PSRYK+EA++
Sbjct: 1   MERRKSRVSL--DPLATVKAAAWAWYQRGSGSEGKPISEFQVTRARPALIPSRYKLEAMR 58

Query: 354 NTEMEEHHNSPSLMKMANTCHSFNSSLLDGYEIESISK 467
             E        S     +T +  ++SLLD YEIE IS+
Sbjct: 59  MAEEGPEKEGSSASSATSTPNLSHTSLLDTYEIERISQ 96


>ref|XP_003600698.1| hypothetical protein MTR_3g065210 [Medicago truncatula]
           gi|355489746|gb|AES70949.1| hypothetical protein
           MTR_3g065210 [Medicago truncatula]
          Length = 181

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 47/108 (43%), Positives = 69/108 (63%), Gaps = 2/108 (1%)
 Frame = +3

Query: 150 FSPINFLMMERKKAKPKAIEDEFAIIKAAAWAWYERGSGSE-GKPIREFDFTNTRKVLVP 326
           F  ++ LM +++K +P+   DE A++KAAAWAWY+ GS SE  K   EFD T T++   P
Sbjct: 5   FFSLSSLMEKKRKPQPQESRDELALVKAAAWAWYQHGSRSERKKSSNEFDVTRTQRSPRP 64

Query: 327 SRYKIEAIKNTEMEE-HHNSPSLMKMANTCHSFNSSLLDGYEIESISK 467
           SRYK+EA++  E+ +   N   +  +AN     N SLLD YE++SIS+
Sbjct: 65  SRYKLEAMRMAEVTDLTCNGLEVGTIAN-----NKSLLDTYEVQSISR 107


>ref|XP_002302939.1| predicted protein [Populus trichocarpa] gi|222844665|gb|EEE82212.1|
           predicted protein [Populus trichocarpa]
          Length = 170

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 44/98 (44%), Positives = 61/98 (62%)
 Frame = +3

Query: 174 MERKKAKPKAIEDEFAIIKAAAWAWYERGSGSEGKPIREFDFTNTRKVLVPSRYKIEAIK 353
           ME+KK K      +  ++KAAAWAWY+ GSGSEGKP+ E   T+TR+   PSRYK+E ++
Sbjct: 1   MEKKKPKGGDSTGDLTLVKAAAWAWYQHGSGSEGKPMCESYVTSTRQAPRPSRYKLEDMR 60

Query: 354 NTEMEEHHNSPSLMKMANTCHSFNSSLLDGYEIESISK 467
               E+  +       A +    ++SLLD YE+ESISK
Sbjct: 61  LRVKEDTMDGSG----APSPIGADNSLLDNYEVESISK 94


>ref|XP_002870539.1| hypothetical protein ARALYDRAFT_493733 [Arabidopsis lyrata subsp.
           lyrata] gi|297316375|gb|EFH46798.1| hypothetical protein
           ARALYDRAFT_493733 [Arabidopsis lyrata subsp. lyrata]
          Length = 225

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 48/94 (51%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
 Frame = +3

Query: 198 KAIEDEFAIIKAAAWAWYERGSGSEGKP-IREFDF-TNTRKVLVPSRYKIEAIKNTEMEE 371
           +A +DE A +KAAAWAWY+R    EGKP +REFDF T   ++  PSRYK+EA KN  + E
Sbjct: 45  RAGDDELATVKAAAWAWYQR---HEGKPMMREFDFTTRATRIPRPSRYKLEASKNMTLSE 101

Query: 372 HHNSP--SLMKMANTCHSFNSSLLDGYEIESISK 467
            + S   S   M     +  SSLLD YEI+SISK
Sbjct: 102 KNVSKPHSNHLMRGDQETKFSSLLDPYEIKSISK 135


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