BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029267
         (966 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA95319.1| retrotransposon protein, putative, unclassified [...   271   2e-70
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]   267   3e-69
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]        263   5e-68
emb|CAH66715.1| OSIGBa0118P15.5 [Oryza sativa Indica Group]           260   4e-67
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]     258   2e-66

>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 955

 Score =  271 bits (693), Expect = 2e-70
 Identities = 136/266 (51%), Positives = 185/266 (69%), Gaps = 6/266 (2%)
 Frame = +1

Query: 1    HGVPLSIVSDRDKVFTSTLWRELFKLLGVVQLLSTAYHPQTDGQSERVNQCLEGYLRCMC 180
            HG+P++IV+DRD+VFTST ++E+FK   V    STAYHPQTDGQ+ERVNQCLE YLRCM 
Sbjct: 664  HGMPIAIVTDRDRVFTSTFFQEVFKSQKVQLRFSTAYHPQTDGQTERVNQCLESYLRCMT 723

Query: 181  GHAPKKWIAWVSLAQWWYNSSHHSAIKMSPFQALFGYRPPSL----IMGDLQQTTVIGVE 348
               P+ W +W++LA+WWYN+++H+AI+M+PF+AL+GY PP +    +  D+ Q   + +E
Sbjct: 724  FQEPQNWCSWIALAEWWYNTTYHTAIQMTPFKALYGYSPPQISEFSVPCDVSQEARVTLE 783

Query: 349  QLLMDRNEALVTIKKNLELSKQRMKELSDRNRSERSFKEGDWVYLKLKPYRQ--FSVRGS 522
                ++   +  +K ++E +++RMK  +DRNR+ER  + GD VYLKL+PYRQ  F +RGS
Sbjct: 784  ----EKETIVQKLKASMEDAQRRMKYYADRNRTERKLEVGDMVYLKLQPYRQNAFGIRGS 839

Query: 523  HVWKLSPKYAGPFPVIQKVGEVAYKLLLPAASKIHPVFHVSLLKKHVGMTDTMTATLPEM 702
               KL  KY GPF V++KVG VAY+L LP  + IHPVFHVS LKKH+G        LP +
Sbjct: 840  --LKLRGKYYGPFKVLEKVGAVAYRLQLPEEAAIHPVFHVSQLKKHLGTHAVPMPNLPAV 897

Query: 703  DEQGTIVLVPINILARRMIKRNNAAV 780
               G I   P+ +L RRMI RNN AV
Sbjct: 898  GPDGQIKTEPVAVLQRRMIPRNNVAV 923


>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
          Length = 1469

 Score =  267 bits (682), Expect = 3e-69
 Identities = 132/270 (48%), Positives = 180/270 (66%)
 Frame = +1

Query: 1    HGVPLSIVSDRDKVFTSTLWRELFKLLGVVQLLSTAYHPQTDGQSERVNQCLEGYLRCMC 180
            HG+P SIV+DRD  FTST W+ELFKL G     S+AYHPQTDGQ+E VN+ +E YLRC  
Sbjct: 1175 HGLPNSIVTDRDPTFTSTFWKELFKLQGTTLKFSSAYHPQTDGQTEIVNKMVEQYLRCFS 1234

Query: 181  GHAPKKWIAWVSLAQWWYNSSHHSAIKMSPFQALFGYRPPSLIMGDLQQTTVIGVEQLLM 360
            G  PK W+ W+ LA+WWYN++ H++ K+SPF++++GY PP LI      T +  VE  L 
Sbjct: 1235 GDKPKGWVKWLPLAEWWYNTNIHASTKLSPFESVYGYPPPKLIPYTPGTTQLQEVENTLK 1294

Query: 361  DRNEALVTIKKNLELSKQRMKELSDRNRSERSFKEGDWVYLKLKPYRQFSVRGSHVWKLS 540
             R+E +  ++ NL+L++ RMK+ +D   + RSF  GD VYL+L+PY+Q SV      KLS
Sbjct: 1295 TRDEIIRILRTNLQLAQDRMKKFADIKXTARSFNIGDLVYLRLQPYKQQSVVQRRNLKLS 1354

Query: 541  PKYAGPFPVIQKVGEVAYKLLLPAASKIHPVFHVSLLKKHVGMTDTMTATLPEMDEQGTI 720
            P++ GP+ V++K+G VAY+L LP  +KIHPVFHVS LK+ +G    +  TLP  D+ G I
Sbjct: 1355 PRFYGPYRVLEKIGTVAYRLELPPEAKIHPVFHVSCLKEKLGERHQLVVTLPPXDKDGVI 1414

Query: 721  VLVPINILARRMIKRNNAAVGHESSAFKGL 810
               P  IL RR+ K+ N AV      +KGL
Sbjct: 1415 RXEPEEILHRRLKKKKNHAVTEVLVKWKGL 1444


>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
          Length = 1586

 Score =  263 bits (672), Expect = 5e-68
 Identities = 130/266 (48%), Positives = 184/266 (69%), Gaps = 6/266 (2%)
 Frame = +1

Query: 1    HGVPLSIVSDRDKVFTSTLWRELFKLLGVVQLLSTAYHPQTDGQSERVNQCLEGYLRCMC 180
            HG+P++I++DRD++FTS L++E+FK + V    ST+YHPQTDGQ+ERVNQCLE YLR M 
Sbjct: 1295 HGMPMAIITDRDRIFTSQLFQEIFKSMKVRLKFSTSYHPQTDGQTERVNQCLESYLRSMT 1354

Query: 181  GHAPKKWIAWVSLAQWWYNSSHHSAIKMSPFQALFGYRPPSL----IMGDLQQTTVIGVE 348
               P +W +W++LA+WWYN+++H++I+M+PFQAL+GY PP +    +  ++ +   + +E
Sbjct: 1355 FQEPTRWHSWLALAEWWYNTTYHTSIQMTPFQALYGYPPPQINEFSVPCNVSEEARVTIE 1414

Query: 349  QLLMDRNEALVTIKKNLELSKQRMKELSDRNRSERSFKEGDWVYLKLKPYRQ--FSVRGS 522
            Q    ++  +  +K +L  +++R+K  +DRNRSER+   GD VYLKL+PYRQ  F +RGS
Sbjct: 1415 Q----KDAIIQKLKYSLTEAQRRIKHYADRNRSERTLAVGDMVYLKLQPYRQTAFGIRGS 1470

Query: 523  HVWKLSPKYAGPFPVIQKVGEVAYKLLLPAASKIHPVFHVSLLKKHVGMTDTMTATLPEM 702
               KL  K+ GPF +++KVG VAYKL LP  S IHPVFHVS LKKH+G      A LP +
Sbjct: 1471 --LKLRSKFYGPFKIMEKVGRVAYKLQLPEGSNIHPVFHVSQLKKHIGSRAVPMANLPSV 1528

Query: 703  DEQGTIVLVPINILARRMIKRNNAAV 780
               G I   P+ +L RRMI R   AV
Sbjct: 1529 GPDGQIKTEPVAVLKRRMIPRGGVAV 1554


>emb|CAH66715.1| OSIGBa0118P15.5 [Oryza sativa Indica Group]
          Length = 1434

 Score =  260 bits (664), Expect = 4e-67
 Identities = 129/266 (48%), Positives = 182/266 (68%), Gaps = 6/266 (2%)
 Frame = +1

Query: 1    HGVPLSIVSDRDKVFTSTLWRELFKLLGVVQLLSTAYHPQTDGQSERVNQCLEGYLRCMC 180
            HG+PL IV DRDK+FTS L++ +FK +G     ST+YHPQ+DGQ+ERVNQC+E YLRCM 
Sbjct: 1159 HGMPLVIVFDRDKIFTSDLFQNVFKSMGTTLRFSTSYHPQSDGQTERVNQCVEAYLRCMV 1218

Query: 181  GHAPKKWIAWVSLAQWWYNSSHHSAIKMSPFQALFGYRPP----SLIMGDLQQTTVIGVE 348
               P+ W  W+  A+WWYN+S+H++++++P++AL+G  PP      I G++ +   I  +
Sbjct: 1219 FQEPRDWHKWLPTAEWWYNTSYHTSLQVTPYEALYGVHPPQNGEQAIPGNVTEEIRITAQ 1278

Query: 349  QLLMDRNEALVTIKKNLELSKQRMKELSDRNRSERSFKEGDWVYLKLKPYRQ--FSVRGS 522
            Q    R E ++ +K NL  ++ R+K+ +DR RSERSF+EGD VYLK++PYRQ  F +RGS
Sbjct: 1279 Q----REELMLRLKDNLLRAQNRIKKFADRLRSERSFQEGDMVYLKMQPYRQNTFGLRGS 1334

Query: 523  HVWKLSPKYAGPFPVIQKVGEVAYKLLLPAASKIHPVFHVSLLKKHVGMTDTMTATLPEM 702
               KL  K+ GPF +++++G+VAY L LP  + IHPVFHVS LKKHVG        LP +
Sbjct: 1335 --LKLRAKFYGPFRILKRIGKVAYHLQLPEEAGIHPVFHVSQLKKHVGNLAVPLPNLPLV 1392

Query: 703  DEQGTIVLVPINILARRMIKRNNAAV 780
            DE G I   P+ +LARR++ R N  V
Sbjct: 1393 DEDGNIKAEPVAVLARRVVPRRNEPV 1418


>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1475

 Score =  258 bits (659), Expect = 2e-66
 Identities = 129/264 (48%), Positives = 184/264 (69%), Gaps = 4/264 (1%)
 Frame = +1

Query: 1    HGVPLSIVSDRDKVFTSTLWRELFKLLGVVQLLSTAYHPQTDGQSERVNQCLEGYLRCMC 180
            HG+P+ I++DRD++FTS+L++E+FK + V    STAYHPQ DGQ+ERVNQCLE YLR M 
Sbjct: 1184 HGMPMVIITDRDRIFTSSLFQEIFKAMKVKLRFSTAYHPQMDGQTERVNQCLESYLRNMT 1243

Query: 181  GHAPKKWIAWVSLAQWWYNSSHHSAIKMSPFQALFGYRPPSLIMGDLQQTTVIGVE-QLL 357
               P KW +W++LA+WWYN++ H+AI+M+PF+A++GY PP +   +      I  E ++ 
Sbjct: 1244 FQEPHKWYSWLALAEWWYNTTFHTAIQMTPFKAMYGYSPPQI--NEFSVPCNISEEARVT 1301

Query: 358  MDRNEALVT-IKKNLELSKQRMKELSDRNRSERSFKEGDWVYLKLKPYRQ--FSVRGSHV 528
            ++  EA++  +K +L  ++ RMK  +D+NR+ER+ + GD VYLKLKPYRQ  F +RGS  
Sbjct: 1302 IEEKEAILNKLKNSLADAQHRMKYFADKNRTERNLEVGDMVYLKLKPYRQSAFGIRGS-- 1359

Query: 529  WKLSPKYAGPFPVIQKVGEVAYKLLLPAASKIHPVFHVSLLKKHVGMTDTMTATLPEMDE 708
             KL  K+ GPF V+QK+G++AYKL LP  ++IHPVFHVS LKKH+G      + LP +  
Sbjct: 1360 LKLRSKFYGPFKVLQKIGQLAYKLQLPDDAQIHPVFHVSQLKKHLGKHAIPMSNLPSVGP 1419

Query: 709  QGTIVLVPINILARRMIKRNNAAV 780
             G I   P+ +L RRM+ R   AV
Sbjct: 1420 DGQIKTEPLAVLQRRMVPRKGVAV 1443