BLASTX nr result

ID: Bupleurum21_contig00029261 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029261
         (1169 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|2...    84   5e-14
gb|ABK92768.1| unknown [Populus trichocarpa]                           84   5e-14
ref|XP_002315369.1| f-box family protein [Populus trichocarpa] g...    81   6e-13
ref|XP_002310987.1| predicted protein [Populus trichocarpa] gi|2...    80   8e-13
ref|XP_002333910.1| predicted protein [Populus trichocarpa] gi|2...    78   5e-12

>ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|222870635|gb|EEF07766.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score = 84.3 bits (207), Expect = 5e-14
 Identities = 68/257 (26%), Positives = 112/257 (43%), Gaps = 14/257 (5%)
 Frame = +1

Query: 1   KRPLITGFFYQTSTMY-PEKLRYVSVHPNQENITDPPACLGFLDAPAILLNSCNGLLL-- 171
           K+  ++GFF+Q    Y P+ ++ ++  P + N         FL    ++L  CNGL+   
Sbjct: 50  KKEPLSGFFFQQRHRYCPDDIKTITYFPVERNRLQQDV-FAFLPQDVVVLALCNGLVCCR 108

Query: 172 --WIVDDSKFIVSSPLTGKFVDLEWNFYSVRVFACGIAFDPMVS-----DHFKVVA---L 321
             +  +D    V +PL  ++  L+W       F   +AF+P         +FKVV     
Sbjct: 109 SCYPFEDPAIYVCNPLNSEWWKLDWKEPGKESFIA-LAFNPFQDISVNLTNFKVVRPRQF 167

Query: 322 VLEESAAFLESRVFSSETVNWGDKIETRVPSDKLPPYCNSKGVFLNGVLYWELRDNSLLA 501
             E+  A+    +++S T NW    E     + L     ++G+F  G+L+W    + +L 
Sbjct: 168 ETEQEEAYFSFEIYASRTRNWKLSKEVCWCDNSLS---KNEGIFSGGILHWLTDGDQILT 224

Query: 502 YNVSENADWLVELPQMGGSPENVLFTEP-GCLGESKGSLYYCRLFNMVLGVWEGKKPVTG 678
           +NV      L+  P     P     T P  C+GES+G LYY  +    L VW  +     
Sbjct: 225 FNVENELALLISTP----LPAGEFNTRPHACIGESEGQLYYVLISEEGLHVWVLEDYF-- 278

Query: 679 SDTWDLKYKINMSDVGK 729
             TW LKY   ++ + K
Sbjct: 279 DSTWSLKYSKTLAQIEK 295


>gb|ABK92768.1| unknown [Populus trichocarpa]
          Length = 384

 Score = 84.3 bits (207), Expect = 5e-14
 Identities = 68/257 (26%), Positives = 112/257 (43%), Gaps = 14/257 (5%)
 Frame = +1

Query: 1   KRPLITGFFYQTSTMY-PEKLRYVSVHPNQENITDPPACLGFLDAPAILLNSCNGLLL-- 171
           K+  ++GFF+Q    Y P+ ++ ++  P + N         FL    ++L  CNGL+   
Sbjct: 50  KKEPLSGFFFQQRHRYCPDDIKTITYFPVERNRLQQDV-FAFLPQDVVVLALCNGLVCCR 108

Query: 172 --WIVDDSKFIVSSPLTGKFVDLEWNFYSVRVFACGIAFDPMVS-----DHFKVVA---L 321
             +  +D    V +PL  ++  L+W       F   +AF+P         +FKVV     
Sbjct: 109 SCYPFEDPAIYVCNPLNSEWWKLDWKEPGKESFIA-LAFNPFQDISVNLTNFKVVRPRQF 167

Query: 322 VLEESAAFLESRVFSSETVNWGDKIETRVPSDKLPPYCNSKGVFLNGVLYWELRDNSLLA 501
             E+  A+    +++S T NW    E     + L     ++G+F  G+L+W    + +L 
Sbjct: 168 ETEQEEAYFSFEIYASRTRNWKLSKEVCWCDNSLS---KNEGIFSGGILHWLTDGDQILT 224

Query: 502 YNVSENADWLVELPQMGGSPENVLFTEP-GCLGESKGSLYYCRLFNMVLGVWEGKKPVTG 678
           +NV      L+  P     P     T P  C+GES+G LYY  +    L VW  +     
Sbjct: 225 FNVENELALLISTP----LPAGEFNTRPHACIGESEGQLYYVLISEEGLHVWVLEDYF-- 278

Query: 679 SDTWDLKYKINMSDVGK 729
             TW LKY   ++ + K
Sbjct: 279 DSTWSLKYSKTLAQIEK 295


>ref|XP_002315369.1| f-box family protein [Populus trichocarpa]
           gi|222864409|gb|EEF01540.1| f-box family protein
           [Populus trichocarpa]
          Length = 406

 Score = 80.9 bits (198), Expect = 6e-13
 Identities = 59/251 (23%), Positives = 112/251 (44%), Gaps = 7/251 (2%)
 Frame = +1

Query: 13  ITGFFYQTSTMYPE--KLRYVSVHPNQENITDPPACLGFLDAPAILLNSCNGLLLWIV-- 180
           ++GFF Q      +  KL +++     +   +P  C    D    + +SCNGLLL     
Sbjct: 83  VSGFFLQKFLFLEQYSKLEFITCEGQDDAAPEPSLCFIEDDQGVCIQHSCNGLLLCSSFR 142

Query: 181 ---DDSKFIVSSPLTGKFVDLEWNFYSVRVFACGIAFDPMVSDHFKVVALVLEESAAFLE 351
              DD K+ +  P T ++  L      + VF   IA+DP +S H+K++  V + +A  + 
Sbjct: 143 CHEDDRKYYICKPTTKQYHQLPKPGCKI-VFGINIAYDPTISPHYKIIC-VCDSNAIKMY 200

Query: 352 SRVFSSETVNWGDKIETRVPSDKLPPYCNSKGVFLNGVLYWELRDNSLLAYNVSENADWL 531
                S  V+   ++ + V          ++GVFLN  L+W  R    L +++ +     
Sbjct: 201 DSAIGSWRVSGNHQVFSHV-------LLFNRGVFLNRALHWISRGALALRFDIEQERMLT 253

Query: 532 VELPQMGGSPENVLFTEPGCLGESKGSLYYCRLFNMVLGVWEGKKPVTGSDTWDLKYKIN 711
           + +P +   PE       G  GES G L    ++  +   ++  +  +    W ++Y+++
Sbjct: 254 MPMPPI---PEGRSERRLGYFGESGGHLCLIEIYGPITTCFDVMRMESDYSGWSVRYRVD 310

Query: 712 MSDVGKLYPSL 744
           +S +   +PS+
Sbjct: 311 LSRIASSFPSM 321


>ref|XP_002310987.1| predicted protein [Populus trichocarpa] gi|222850807|gb|EEE88354.1|
           predicted protein [Populus trichocarpa]
          Length = 396

 Score = 80.5 bits (197), Expect = 8e-13
 Identities = 71/268 (26%), Positives = 121/268 (45%), Gaps = 16/268 (5%)
 Frame = +1

Query: 115 LGFLDAPAILLNSCNGLLLWIVDDS-KFIVSSPLTGKFVDLEWNFYSVRVFACGIAFDPM 291
           L F  A    L+ CNGLLL++   + ++ V +P T   V +  +F    +    +AFDP 
Sbjct: 114 LPFEPARGDFLDCCNGLLLFVEGCTLQYYVCNPATKHCVAIPRDFMLENIIFAALAFDPS 173

Query: 292 VSDHFKVVALVLEESAAFLESRVFSSETVNW-GDKIETRVPSD--KLPPYCNSKGVFLNG 462
            S H++VV     ES   +  +VFSSET NW G++      +   K+  +C    ++L+G
Sbjct: 174 TSPHYRVVCFDYSESRPPVRLQVFSSETGNWTGNETPFGYSNKKCKVVKHC----IYLDG 229

Query: 463 VLYWELRDNSLLAYNVSENADWLVELPQMGGSPENVLFTEPGCLGESKGSLYYCRLFNMV 642
            LY       ++ ++++      +ELP+     E +     GC+G+ +G L Y  L    
Sbjct: 230 ALYCISTSKHIICFDLNRGNSRAIELPE----KERLDPNGSGCVGQWRGHLCYTDLVGTA 285

Query: 643 LGVWEGKKPVTGSDTWDLKYKINMSDVGKLY---PSLKFVG---------SQALEFLDDC 786
              W   +    +D W L + IN+  +GKL+    S+  +G           AL    D 
Sbjct: 286 FYFWL-LEDRCKNDRWTLVHNINVDYLGKLWLQRDSMITIGRFGKISSFRPFALHPTSDV 344

Query: 787 HGIFMSVKNGVVEFRFEENAVKKLYETQ 870
             IF      ++ +  E+  +K +Y T+
Sbjct: 345 --IFFGTPGVMLSYHLEDKRLKLIYRTK 370


>ref|XP_002333910.1| predicted protein [Populus trichocarpa] gi|222838910|gb|EEE77261.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score = 77.8 bits (190), Expect = 5e-12
 Identities = 74/317 (23%), Positives = 146/317 (46%), Gaps = 35/317 (11%)
 Frame = +1

Query: 16  TGFFYQTSTMYPEKLRYVSVHPNQENITDPPACLG----FLDAPAILL----------NS 153
           +GF +  S      L Y + + +  ++ D   C+G    F+D+ A +L          + 
Sbjct: 53  SGFLFLCSFQIIGGLGYFAAYASYPDVHD---CVGQTDGFVDSYACMLPFMLSSDHYFDC 109

Query: 154 CNGLLLWIVDDSK------FIVSSPLTGKFVDLEWNFYSVRVFACGIAFDPMVSDHFKVV 315
           CNGLLL++  + +      + V +  T + V +         FA  IA+DP  S H+KVV
Sbjct: 110 CNGLLLFVRREQREDLPHYYFVCNTTTRQCVAIPNPRPRTAPFAAAIAYDPAKSPHYKVV 169

Query: 316 ALVL--EESAAFLESRVFSSETVNW---GDKIETRVP---SDKLPPYCNSKGVFLNGVLY 471
             +   E+++  ++  +FSS+T  W   G  + T +P   +D     C  + ++L+G++Y
Sbjct: 170 RFIYLEEKTSCPVKLDIFSSDTGKWVRRGVMLSTELPLAAADADKYGCIRRSIYLDGMIY 229

Query: 472 -WELRDNSLLAYNVSENADWLVELPQMGGSPENVLFTEPGCLGESKGSLYYCRL--FNMV 642
                 N L+ ++++  +D  +ELP    +  +      G +G S+GSLYY       ++
Sbjct: 230 KLSFVVNYLIRFDLNAPSDVAIELPHKNAADRH------GFIGMSRGSLYYSNQDESGLM 283

Query: 643 LGVWEGKKPVTGSDTWDLKYKINMSDVGKLYPSLKFVG----SQALEFLDDCHGIFMSVK 810
           + +W  +        W L ++I++  +   YP ++  G    + A+    D   IF+   
Sbjct: 284 ISIWLLEDRCKRDPFWKLTHRISVDSLTSKYPDVRNSGFHFHTYAIHPASDI--IFLGKP 341

Query: 811 NGVVEFRFEENAVKKLY 861
           N V+ +  + N  ++++
Sbjct: 342 NMVLSYDHKSNKSEEVF 358


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