BLASTX nr result

ID: Bupleurum21_contig00029259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029259
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG22120.1| polyprotein [Cynara cardunculus var. scolymus]         253   1e-65
emb|CAN71189.1| hypothetical protein VITISV_005044 [Vitis vinifera]   233   2e-59
emb|CAN63212.1| hypothetical protein VITISV_002844 [Vitis vinifera]   232   2e-59
emb|CAN82633.1| hypothetical protein VITISV_028135 [Vitis vinifera]   230   1e-58
emb|CAN73851.1| hypothetical protein VITISV_035861 [Vitis vinifera]   230   1e-58

>gb|ABG22120.1| polyprotein [Cynara cardunculus var. scolymus]
          Length = 349

 Score =  253 bits (645), Expect = 1e-65
 Identities = 117/163 (71%), Positives = 142/163 (87%), Gaps = 1/163 (0%)
 Frame = -2

Query: 491 DCSSATTPMATATKLDKDT-GAPVDMTTYRGMIGSLLYLTASRPDIMYATCLCARFQADP 315
           +CSS  TPMA   KL+ D  G  V++T+YRGMIGSLLYLTASRPDIM++TCLCAR+QA+P
Sbjct: 153 ECSSMKTPMAPPLKLNADPDGKSVNVTSYRGMIGSLLYLTASRPDIMFSTCLCARYQANP 212

Query: 314 REPHLTAVKRIFKYLKGTITLGLWYPRESDFNLLGYSDADFAGCKIDRKSTSGSCQFLGD 135
           +E HL AVKRIF+YLKGT  LGLWYP++S F+L G+SD+++AGCK+DRKST+GSCQ LG 
Sbjct: 213 KESHLAAVKRIFRYLKGTPNLGLWYPKDSGFDLTGFSDSNYAGCKVDRKSTTGSCQLLGG 272

Query: 134 RIVSWYSKKQKSISTSTAEAEYIAAGSCCAQILWMKNQLLDYD 6
           ++VSW SKKQ S+STSTAEAEY+AAGSCCAQ+LWMKNQL DYD
Sbjct: 273 KLVSWTSKKQHSVSTSTAEAEYVAAGSCCAQVLWMKNQLADYD 315


>emb|CAN71189.1| hypothetical protein VITISV_005044 [Vitis vinifera]
          Length = 334

 Score =  233 bits (593), Expect = 2e-59
 Identities = 107/158 (67%), Positives = 132/158 (83%), Gaps = 1/158 (0%)
 Frame = -2

Query: 473 TPMATATKLDKDT-GAPVDMTTYRGMIGSLLYLTASRPDIMYATCLCARFQADPREPHLT 297
           TPM+++ KLD D  G  +D T YRGMIGSLLYLTASRPDIMY+ CLCARFQ+ P+E HL+
Sbjct: 95  TPMSSSIKLDMDEKGKSIDSTMYRGMIGSLLYLTASRPDIMYSVCLCARFQSCPKESHLS 154

Query: 296 AVKRIFKYLKGTITLGLWYPRESDFNLLGYSDADFAGCKIDRKSTSGSCQFLGDRIVSWY 117
            VKRI +YLKGT+ +GLWYP+  +F L+G+SDADFAGC+++RKSTSG+C FLG  +VSW+
Sbjct: 155 XVKRILRYLKGTMNIGLWYPKGDNFELIGFSDADFAGCRVERKSTSGTCHFLGHSLVSWH 214

Query: 116 SKKQKSISTSTAEAEYIAAGSCCAQILWMKNQLLDYDL 3
           SKKQ S++ STAEAEYIAAG CCAQILWMK  L D++L
Sbjct: 215 SKKQNSVALSTAEAEYIAAGLCCAQILWMKQTLSDFNL 252


>emb|CAN63212.1| hypothetical protein VITISV_002844 [Vitis vinifera]
          Length = 900

 Score =  232 bits (592), Expect = 2e-59
 Identities = 108/158 (68%), Positives = 131/158 (82%), Gaps = 1/158 (0%)
 Frame = -2

Query: 473 TPMATATKLDKDT-GAPVDMTTYRGMIGSLLYLTASRPDIMYATCLCARFQADPREPHLT 297
           TPM+++ KLDKD  G  +D T YRGMIGSLLYLTASRPDIMY+ CLCARFQ+ P+E HL+
Sbjct: 227 TPMSSSIKLDKDEKGKFIDSTMYRGMIGSLLYLTASRPDIMYSVCLCARFQSCPKESHLS 286

Query: 296 AVKRIFKYLKGTITLGLWYPRESDFNLLGYSDADFAGCKIDRKSTSGSCQFLGDRIVSWY 117
           AVKRI +YLKGT+ +GLWYP+  +F L+GYSDADFAGCK++RK+ SG+C FLG  +VSW+
Sbjct: 287 AVKRILRYLKGTMDIGLWYPKGDNFELIGYSDADFAGCKVERKNISGTCHFLGHSLVSWH 346

Query: 116 SKKQKSISTSTAEAEYIAAGSCCAQILWMKNQLLDYDL 3
           SKKQ S+  STAE EYIAAG CCAQILWMK  L D++L
Sbjct: 347 SKKQNSVDLSTAEVEYIAAGLCCAQILWMKQTLNDFNL 384


>emb|CAN82633.1| hypothetical protein VITISV_028135 [Vitis vinifera]
          Length = 978

 Score =  230 bits (586), Expect = 1e-58
 Identities = 106/158 (67%), Positives = 131/158 (82%), Gaps = 1/158 (0%)
 Frame = -2

Query: 473 TPMATATKLDKDT-GAPVDMTTYRGMIGSLLYLTASRPDIMYATCLCARFQADPREPHLT 297
           TPM+++ KLD D  G  +D T YRGMIGSLLYLTASRPDIMY+ CLCARFQ+ P+E HL+
Sbjct: 221 TPMSSSIKLDMDEKGKSIDSTMYRGMIGSLLYLTASRPDIMYSVCLCARFQSCPKESHLS 280

Query: 296 AVKRIFKYLKGTITLGLWYPRESDFNLLGYSDADFAGCKIDRKSTSGSCQFLGDRIVSWY 117
           AVKRI +YLKGT+ +GLWYP+  +F L+G+SDA FAGC+++R+STS +C FLG  +VSW+
Sbjct: 281 AVKRILRYLKGTMNIGLWYPKGDNFELIGFSDAHFAGCRVERRSTSDTCHFLGHSLVSWH 340

Query: 116 SKKQKSISTSTAEAEYIAAGSCCAQILWMKNQLLDYDL 3
           SKKQ S++ STAEAEYIAAG CCAQILWMK  L D+DL
Sbjct: 341 SKKQNSVALSTAEAEYIAAGLCCAQILWMKQTLSDFDL 378


>emb|CAN73851.1| hypothetical protein VITISV_035861 [Vitis vinifera]
          Length = 354

 Score =  230 bits (586), Expect = 1e-58
 Identities = 106/158 (67%), Positives = 131/158 (82%), Gaps = 1/158 (0%)
 Frame = -2

Query: 473 TPMATATKLDKDT-GAPVDMTTYRGMIGSLLYLTASRPDIMYATCLCARFQADPREPHLT 297
           TPM+++ KLD D  G  +D T YRGMIGSLLYLTASRPDIMY+ CLCARFQ+  +E HL+
Sbjct: 95  TPMSSSIKLDMDEKGKSIDSTMYRGMIGSLLYLTASRPDIMYSVCLCARFQSCSKESHLS 154

Query: 296 AVKRIFKYLKGTITLGLWYPRESDFNLLGYSDADFAGCKIDRKSTSGSCQFLGDRIVSWY 117
           AVKRI +YLKGT+ +GLWYP+  +F L+G+SDADFAGC+++RKSTSG+C FLG  +VSW+
Sbjct: 155 AVKRILRYLKGTMNIGLWYPKGDNFELIGFSDADFAGCRVERKSTSGTCHFLGHSLVSWH 214

Query: 116 SKKQKSISTSTAEAEYIAAGSCCAQILWMKNQLLDYDL 3
           SKKQ S++ ST EAEYIAAG CCAQILWMK  L D++L
Sbjct: 215 SKKQNSVALSTTEAEYIAAGLCCAQILWMKQTLSDFNL 252


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