BLASTX nr result

ID: Bupleurum21_contig00029239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029239
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533270.1| conserved hypothetical protein [Ricinus comm...   160   1e-37
ref|XP_002327078.1| predicted protein [Populus trichocarpa] gi|2...   154   9e-36
ref|XP_004157860.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   149   3e-34
ref|XP_004141955.1| PREDICTED: uncharacterized protein LOC101205...   149   3e-34
ref|XP_002310199.1| predicted protein [Populus trichocarpa] gi|2...   146   2e-33

>ref|XP_002533270.1| conserved hypothetical protein [Ricinus communis]
           gi|223526895|gb|EEF29102.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 295

 Score =  160 bits (404), Expect = 1e-37
 Identities = 84/146 (57%), Positives = 95/146 (65%), Gaps = 2/146 (1%)
 Frame = -1

Query: 455 RKLSFFSLFNHSILILMSFLWLEFSQSFQVLAILMTTSTYSIVYGYRFWTAIGLPGACFP 276
           RKLSFF LFN+SIL  MSFLWLEFSQSFQVLAIL+ T  YS+VYGYRFWTAIGLP ACFP
Sbjct: 156 RKLSFFQLFNNSILAFMSFLWLEFSQSFQVLAILLATLVYSVVYGYRFWTAIGLPSACFP 215

Query: 275 FVMNCQIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMHITRGGCNGIGAWILNSV 96
           FV NCQI                                 L+H+ +GGCNGIGAWI NSV
Sbjct: 216 FVENCQI-------------------VLLGCNLACHVGVLLLHLMKGGCNGIGAWIFNSV 256

Query: 95  LNAAILVMFLVFYIK--TMRKRKVNQ 24
           LN AIL++FL FY+K    +K+K  Q
Sbjct: 257 LNGAILLLFLNFYVKMHLAKKKKKKQ 282


>ref|XP_002327078.1| predicted protein [Populus trichocarpa] gi|222835393|gb|EEE73828.1|
           predicted protein [Populus trichocarpa]
          Length = 303

 Score =  154 bits (388), Expect = 9e-36
 Identities = 77/141 (54%), Positives = 93/141 (65%)
 Frame = -1

Query: 455 RKLSFFSLFNHSILILMSFLWLEFSQSFQVLAILMTTSTYSIVYGYRFWTAIGLPGACFP 276
           RKL+FF+LFN SIL+ MSFLWLEFSQSFQVLAIL+TT  YS+VYGYRFWTAIGLP ACFP
Sbjct: 155 RKLTFFTLFNQSILLFMSFLWLEFSQSFQVLAILLTTLLYSVVYGYRFWTAIGLPSACFP 214

Query: 275 FVMNCQIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMHITRGGCNGIGAWILNSV 96
           FV++CQ+                                  +HI +GGCNGIGAW  NS+
Sbjct: 215 FVVSCQV-------------------VLLGCNLVCHFGVLSLHILKGGCNGIGAWGFNSM 255

Query: 95  LNAAILVMFLVFYIKTMRKRK 33
           LNA IL++FL FY+K    ++
Sbjct: 256 LNAMILLLFLKFYLKMYSNKR 276


>ref|XP_004157860.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101229590 [Cucumis sativus]
          Length = 316

 Score =  149 bits (375), Expect = 3e-34
 Identities = 78/149 (52%), Positives = 92/149 (61%)
 Frame = -1

Query: 455 RKLSFFSLFNHSILILMSFLWLEFSQSFQVLAILMTTSTYSIVYGYRFWTAIGLPGACFP 276
           R+LSFF LFNHSI   MSF+WLEFSQSFQVLAIL T+  Y++VYGYRFWTAIGL  ACFP
Sbjct: 155 RRLSFFQLFNHSISTFMSFMWLEFSQSFQVLAILSTSVVYAVVYGYRFWTAIGLRRACFP 214

Query: 275 FVMNCQIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMHITRGGCNGIGAWILNSV 96
           FV+NCQ                                  L+H  +GGCNGIGAW  NSV
Sbjct: 215 FVVNCQF-------------------VLLGCNLACHVGVLLLHFMKGGCNGIGAWSFNSV 255

Query: 95  LNAAILVMFLVFYIKTMRKRKVNQGEEED 9
           LN AIL++FL FY+      K++ G+ ED
Sbjct: 256 LNGAILLLFLNFYL------KIHLGDTED 278


>ref|XP_004141955.1| PREDICTED: uncharacterized protein LOC101205262 [Cucumis sativus]
          Length = 316

 Score =  149 bits (375), Expect = 3e-34
 Identities = 78/149 (52%), Positives = 92/149 (61%)
 Frame = -1

Query: 455 RKLSFFSLFNHSILILMSFLWLEFSQSFQVLAILMTTSTYSIVYGYRFWTAIGLPGACFP 276
           R+LSFF LFNHSI   MSF+WLEFSQSFQVLAIL T+  Y++VYGYRFWTAIGL  ACFP
Sbjct: 155 RRLSFFQLFNHSISTFMSFMWLEFSQSFQVLAILSTSVVYAVVYGYRFWTAIGLRRACFP 214

Query: 275 FVMNCQIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMHITRGGCNGIGAWILNSV 96
           FV+NCQ                                  L+H  +GGCNGIGAW  NSV
Sbjct: 215 FVVNCQF-------------------VLLGCNLACHVGVLLLHFMKGGCNGIGAWSFNSV 255

Query: 95  LNAAILVMFLVFYIKTMRKRKVNQGEEED 9
           LN AIL++FL FY+      K++ G+ ED
Sbjct: 256 LNGAILLLFLNFYL------KIHLGDTED 278


>ref|XP_002310199.1| predicted protein [Populus trichocarpa] gi|222853102|gb|EEE90649.1|
           predicted protein [Populus trichocarpa]
          Length = 279

 Score =  146 bits (368), Expect = 2e-33
 Identities = 78/142 (54%), Positives = 88/142 (61%), Gaps = 1/142 (0%)
 Frame = -1

Query: 455 RKLSFFSLFNHSILILMSFLWLEFSQSFQVLAILMTTSTYSIVYGYRFWTAIGLPGACFP 276
           RKL  F L N+SIL  MSFLWLEFSQSFQVLAIL+ T  YSI+YGYRFWTA+GLP ACFP
Sbjct: 150 RKLVSFQLVNNSILTFMSFLWLEFSQSFQVLAILIATLVYSIIYGYRFWTAVGLPSACFP 209

Query: 275 FVMNCQIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMHITRGGCNGIGAWILNSV 96
           FV+NCQI                                  +H  +GGCNGIGAW  NSV
Sbjct: 210 FVLNCQI-------------------VLLGCNVACHVGVLSLHFMKGGCNGIGAWWFNSV 250

Query: 95  LNAAILVMFLVFYIKT-MRKRK 33
           LN AIL +FL FY+K  + KRK
Sbjct: 251 LNGAILFLFLNFYVKMYLGKRK 272


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