BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029216
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA97807.1| retrotransposon protein, putative, Ty3-gypsy subc...    96   2e-18
emb|CAH65865.1| OSIGBa0132I10.1 [Oryza sativa Indica Group]            96   4e-18
gb|ABA98841.1| retrotransposon protein, putative, Ty3-gypsy subc...    95   5e-18
gb|ABA94359.1| retrotransposon protein, putative, Ty3-gypsy subc...    95   5e-18
gb|AAX95257.1| retrotransposon protein, putative, Ty3-gypsy sub-...    95   5e-18

>gb|ABA97807.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1188

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 46/116 (39%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
 Frame = +1

Query: 136 FRKQHPPLFEGSTDPLEAQDWKGSLEDIFEFMQLSDKEKVACASHTLRKDAKIWWDVVKL 315
           F +  PP+F  +T+P+EA DW  ++E   + +Q +D+EKV+ ASH L   A  WWD  +L
Sbjct: 58  FLRVRPPIFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDHFRL 117

Query: 316 TRNVTQ-MTWAEFEILFNEKFYSEAMLSAKVNEFSRLYQGSMSVADYSQRFDRLAK 480
            R + + +TW EF   F +   +  ++S K  EF  L QGS SV +Y   F+RLA+
Sbjct: 118 NRTIAEPITWLEFTAAFRKTHIASGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLAR 173


>emb|CAH65865.1| OSIGBa0132I10.1 [Oryza sativa Indica Group]
          Length = 1670

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 47/116 (40%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
 Frame = +1

Query: 136 FRKQHPPLFEGSTDPLEAQDWKGSLEDIFEFMQLSDKEKVACASHTLRKDAKIWWDVVKL 315
           F +  PP+F  +T+P+EA DW  ++E   + +Q SD+EKV+ ASH L   A  WWD  +L
Sbjct: 287 FLRVRPPIFSSTTNPVEAGDWLHAIEKKLDLLQCSDQEKVSFASHQLHGPASEWWDHFRL 346

Query: 316 TRNVTQ-MTWAEFEILFNEKFYSEAMLSAKVNEFSRLYQGSMSVADYSQRFDRLAK 480
            R   + +TW EF   F +      ++S K  EF  L QGS SV +Y   F+RLA+
Sbjct: 347 NRTTAEPITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLAR 402


>gb|ABA98841.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1470

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 47/116 (40%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
 Frame = +1

Query: 136 FRKQHPPLFEGSTDPLEAQDWKGSLEDIFEFMQLSDKEKVACASHTLRKDAKIWWDVVKL 315
           F +  PP+F  +T+P+EA DW  ++E   + +Q +D+EKV+ ASH L   A  WWD  +L
Sbjct: 85  FLRVRPPIFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPAFEWWDHFRL 144

Query: 316 TRNVTQ-MTWAEFEILFNEKFYSEAMLSAKVNEFSRLYQGSMSVADYSQRFDRLAK 480
            R  T+ +TW EF   F +      ++S K  EF  L QGS SV +Y   F+RLA+
Sbjct: 145 NRTTTEPITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLAR 200


>gb|ABA94359.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1505

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 47/116 (40%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
 Frame = +1

Query: 136 FRKQHPPLFEGSTDPLEAQDWKGSLEDIFEFMQLSDKEKVACASHTLRKDAKIWWDVVKL 315
           F    PP+F  +T+P+EA DW  ++E   + +Q +D+EKV+ ASH L   A  WWD  +L
Sbjct: 366 FLHVRPPIFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDHFRL 425

Query: 316 TRNVTQ-MTWAEFEILFNEKFYSEAMLSAKVNEFSRLYQGSMSVADYSQRFDRLAK 480
            R   + +TW EF   F +   S  ++S K  EF  L QGS SV +Y   F+RLA+
Sbjct: 426 NRTTAEPITWLEFTAAFRKTHISSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLAR 481


>gb|AAX95257.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
           sativa Japonica Group] gi|77550597|gb|ABA93394.1|
           retrotransposon protein, putative, Ty3-gypsy subclass
           [Oryza sativa Japonica Group]
          Length = 1214

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 47/116 (40%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
 Frame = +1

Query: 136 FRKQHPPLFEGSTDPLEAQDWKGSLEDIFEFMQLSDKEKVACASHTLRKDAKIWWDVVKL 315
           F +  PP F  +T+P+EA DW  ++E   + +Q +D+EKV+ ASH L   A  WWD  +L
Sbjct: 319 FLRVRPPTFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDHFRL 378

Query: 316 TRNVTQ-MTWAEFEILFNEKFYSEAMLSAKVNEFSRLYQGSMSVADYSQRFDRLAK 480
            R  T+ +TW EF   F +      ++S K  EF  L QGS SV +Y   F+RLA+
Sbjct: 379 NRTTTEPITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLAR 434