BLASTX nr result

ID: Bupleurum21_contig00029200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029200
         (798 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263477.2| PREDICTED: uncharacterized protein LOC100263...   155   1e-35
emb|CBI31785.3| unnamed protein product [Vitis vinifera]              155   1e-35
ref|XP_002321896.1| methyl binding domain protein [Populus trich...   137   3e-30
emb|CBI34715.3| unnamed protein product [Vitis vinifera]              135   8e-30
ref|XP_002510809.1| conserved hypothetical protein [Ricinus comm...   130   3e-28

>ref|XP_002263477.2| PREDICTED: uncharacterized protein LOC100263513 [Vitis vinifera]
          Length = 637

 Score =  155 bits (391), Expect = 1e-35
 Identities = 84/194 (43%), Positives = 116/194 (59%), Gaps = 11/194 (5%)
 Frame = -2

Query: 725 SSPEWLPAGWTSKVKTSKNGNKYKSYSDPSKKFKFLSKPEVLRYLNSIDSN----LQHRS 558
           SS +WLP GW  ++K +  G KYK Y  PS+  KF SKPEV RYLN    N    +Q +S
Sbjct: 5   SSDDWLPPGWKVEMKLTSTGRKYKCYIHPSRGLKFYSKPEVSRYLNKAPLNDRESIQKKS 64

Query: 557 EDDSENF------GHPKSLEKSKETIKHSEENVVVEEAIADGLPPGWIKEVRVTQRGKSV 396
            +           G  KS+EK K  I    + VV E   A+GLPPGWIKE+++ ++  +V
Sbjct: 65  IERKTPIKTMAPAGKKKSMEKKKHCIA---KKVVFERVTAEGLPPGWIKEIKIQKKCGTV 121

Query: 395 RRDLYYTDPISGYVFLSLKDCKRYIKTGILGKSSYMPKDKDHINMELENDNISSP-VDQG 219
           RRD YYTDP++GY+F S+KD  RY+KTG  G+ ++ PK +D  ++ LE+D   SP V + 
Sbjct: 122 RRDAYYTDPVNGYIFRSMKDTLRYLKTGDPGRLAFKPKPRDSGDINLEDDKTYSPVVPRK 181

Query: 218 NELQDGGISGGVTK 177
            EL  GG    +T+
Sbjct: 182 QELAGGGARRQITR 195


>emb|CBI31785.3| unnamed protein product [Vitis vinifera]
          Length = 560

 Score =  155 bits (391), Expect = 1e-35
 Identities = 84/194 (43%), Positives = 116/194 (59%), Gaps = 11/194 (5%)
 Frame = -2

Query: 725 SSPEWLPAGWTSKVKTSKNGNKYKSYSDPSKKFKFLSKPEVLRYLNSIDSN----LQHRS 558
           SS +WLP GW  ++K +  G KYK Y  PS+  KF SKPEV RYLN    N    +Q +S
Sbjct: 5   SSDDWLPPGWKVEMKLTSTGRKYKCYIHPSRGLKFYSKPEVSRYLNKAPLNDRESIQKKS 64

Query: 557 EDDSENF------GHPKSLEKSKETIKHSEENVVVEEAIADGLPPGWIKEVRVTQRGKSV 396
            +           G  KS+EK K  I    + VV E   A+GLPPGWIKE+++ ++  +V
Sbjct: 65  IERKTPIKTMAPAGKKKSMEKKKHCIA---KKVVFERVTAEGLPPGWIKEIKIQKKCGTV 121

Query: 395 RRDLYYTDPISGYVFLSLKDCKRYIKTGILGKSSYMPKDKDHINMELENDNISSP-VDQG 219
           RRD YYTDP++GY+F S+KD  RY+KTG  G+ ++ PK +D  ++ LE+D   SP V + 
Sbjct: 122 RRDAYYTDPVNGYIFRSMKDTLRYLKTGDPGRLAFKPKPRDSGDINLEDDKTYSPVVPRK 181

Query: 218 NELQDGGISGGVTK 177
            EL  GG    +T+
Sbjct: 182 QELAGGGARRQITR 195


>ref|XP_002321896.1| methyl binding domain protein [Populus trichocarpa]
           gi|222868892|gb|EEF06023.1| methyl binding domain
           protein [Populus trichocarpa]
          Length = 243

 Score =  137 bits (345), Expect = 3e-30
 Identities = 76/200 (38%), Positives = 114/200 (57%), Gaps = 1/200 (0%)
 Frame = -2

Query: 722 SPEWLPAGWTSKVKTSKNGNKYKSYSDPSKKFKFLSKPEVLRYLNSIDSNLQHRSEDDSE 543
           S +WLP GW  +VK   +G K K Y  P+  F+F SK EV RYLN               
Sbjct: 6   SDDWLPEGWRVEVKVRNSGKKDKFYFPPTGGFRFNSKIEVSRYLNG-------------- 51

Query: 542 NFGHPKSLEKSKETIKHSEENVVVEEAIADGLPPGWIKEVRVTQRGKSVRRDLYYTDPIS 363
              HPKS EK     + S   VV+E+ + +GLP GW KE++VT++G  +RRD +YTDP+S
Sbjct: 52  --SHPKSEEKVGSNDQWSSNKVVIEKTVPEGLPLGWTKEIKVTKKGGRIRRDPFYTDPVS 109

Query: 362 GYVFLSLKDCKRYIKTGILGKSSYMPKDKDHINMELENDNISSP-VDQGNELQDGGISGG 186
           G VF S+K+  RYI++G++G+ ++    KD+  +EL++D   SP V +  +L+       
Sbjct: 110 GCVFRSMKEAHRYIESGVVGRLAFKRNRKDNYVVELKDDKTCSPAVAEKQDLEVNETPSP 169

Query: 185 VTKNNEETLTATFTNNHERL 126
           VT   +++L A     HE++
Sbjct: 170 VT--GDQSLKACEIAKHEQI 187


>emb|CBI34715.3| unnamed protein product [Vitis vinifera]
          Length = 1076

 Score =  135 bits (341), Expect = 8e-30
 Identities = 75/167 (44%), Positives = 99/167 (59%), Gaps = 4/167 (2%)
 Frame = -2

Query: 719 PEWLPAGWTSKVKTSKNGN----KYKSYSDPSKKFKFLSKPEVLRYLNSIDSNLQHRSED 552
           P+WLP GW  ++KT ++G+    +YK Y DPS  ++F SKP+V RYL +I  N    S  
Sbjct: 36  PDWLPNGWILELKTQRSGSCVGKQYKCYLDPSTGYRFYSKPDVFRYLKTIKHN-SCTSRQ 94

Query: 551 DSENFGHPKSLEKSKETIKHSEENVVVEEAIADGLPPGWIKEVRVTQRGKSVRRDLYYTD 372
                G P SL K           VV+E + ADGLP GWIKE+++      +RRD YYTD
Sbjct: 95  KKVGPGMP-SLGK-----------VVIERSTADGLPAGWIKEIKIRMNENGIRRDPYYTD 142

Query: 371 PISGYVFLSLKDCKRYIKTGILGKSSYMPKDKDHINMELENDNISSP 231
           P+SGYVF S KD  RY+KTG + + ++ PK+K     EL ND IS P
Sbjct: 143 PVSGYVFRSRKDVFRYLKTGEISRHAFKPKNKCINVPELPNDEISPP 189


>ref|XP_002510809.1| conserved hypothetical protein [Ricinus communis]
           gi|223549924|gb|EEF51411.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 644

 Score =  130 bits (327), Expect = 3e-28
 Identities = 77/198 (38%), Positives = 104/198 (52%), Gaps = 35/198 (17%)
 Frame = -2

Query: 734 DNLSSPEWLPAGWTSKVKTSKNGNKYKS-------------------------------- 651
           +N +S + LP GWT KVK S +G KYKS                                
Sbjct: 8   NNCNSDDQLPDGWTVKVKVSASGKKYKSSAVGKVLGMQPLLGSKFKTAQQQPPCPEFSSY 67

Query: 650 ---YSDPSKKFKFLSKPEVLRYLNSIDSNLQHRSEDDSENFGHPKSLEKSKETIKHSEEN 480
              Y  PS + KF SK EV R+L                   +PKS EK     +HS + 
Sbjct: 68  NPCYFPPSGEGKFYSKLEVARFLKR----------------NNPKSDEKENCIEQHSLDK 111

Query: 479 VVVEEAIADGLPPGWIKEVRVTQRGKSVRRDLYYTDPISGYVFLSLKDCKRYIKTGILGK 300
            VVE++  +GLP GW KE++VT+RG  +RRD YYTDP+SGYVF S+KD  RY++TG +G+
Sbjct: 112 FVVEKSEPEGLPLGWTKEIKVTKRGHKIRRDPYYTDPVSGYVFRSMKDALRYLETGEVGR 171

Query: 299 SSYMPKDKDHINMELEND 246
            ++ PKD  + N+ELE+D
Sbjct: 172 LAFKPKDTGNDNVELEDD 189


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