BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029198
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281545.1| PREDICTED: probable E3 ubiquitin-protein lig...   184   9e-45
emb|CAN65617.1| hypothetical protein VITISV_032298 [Vitis vinifera]   184   9e-45
ref|XP_003531879.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   183   1e-44
ref|XP_003552611.1| PREDICTED: X-linked retinitis pigmentosa GTP...   182   3e-44
ref|XP_002330952.1| predicted protein [Populus trichocarpa] gi|2...   176   2e-42

>ref|XP_002281545.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
           vinifera] gi|298204453|emb|CBI16933.3| unnamed protein
           product [Vitis vinifera]
          Length = 478

 Score =  184 bits (466), Expect = 9e-45
 Identities = 82/105 (78%), Positives = 92/105 (87%)
 Frame = +3

Query: 57  MGVDEIFGESQPVIHPSKSAIYVWGYNQSGQTGRKGKERTLRIPKQIPPKLFGCPVGVNS 236
           M + +IFGES+PV  P+KSAIYVWGYNQ GQTGR GKE  LRIPKQ+PP+LFGCP G NS
Sbjct: 1   MDIGDIFGESRPVNIPTKSAIYVWGYNQRGQTGRNGKELQLRIPKQLPPELFGCPAGANS 60

Query: 237 RWLDVACGREHTAAVSSDGSLYTWGGNDFGQLGDGTENRRKHPKK 371
           RWL +ACGREHTAAV+SDGSL+TWG NDFGQLGDGTE+ RKHPKK
Sbjct: 61  RWLSIACGREHTAAVASDGSLFTWGANDFGQLGDGTEDGRKHPKK 105



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/91 (32%), Positives = 45/91 (49%)
 Frame = +3

Query: 78  GESQPVIHPSKSAIYVWGYNQSGQTGRKGKERTLRIPKQIPPKLFGCPVGVNSRWLDVAC 257
           GE           +Y WG    GQ G    +      K++ P+      G++++  D+AC
Sbjct: 234 GEYHTAAISENGEVYTWGLGNMGQLGHCSLQYG---DKELVPRRVVALDGISTK--DIAC 288

Query: 258 GREHTAAVSSDGSLYTWGGNDFGQLGDGTEN 350
           G  HT A++S G+LY WGG   GQLG G ++
Sbjct: 289 GGVHTCALTSKGALYAWGGGQAGQLGLGPQS 319


>emb|CAN65617.1| hypothetical protein VITISV_032298 [Vitis vinifera]
          Length = 461

 Score =  184 bits (466), Expect = 9e-45
 Identities = 82/105 (78%), Positives = 92/105 (87%)
 Frame = +3

Query: 57  MGVDEIFGESQPVIHPSKSAIYVWGYNQSGQTGRKGKERTLRIPKQIPPKLFGCPVGVNS 236
           M + +IFGES+PV  P+KSAIYVWGYNQ GQTGR GKE  LRIPKQ+PP+LFGCP G NS
Sbjct: 1   MDIGDIFGESRPVNIPTKSAIYVWGYNQRGQTGRNGKELQLRIPKQLPPELFGCPAGANS 60

Query: 237 RWLDVACGREHTAAVSSDGSLYTWGGNDFGQLGDGTENRRKHPKK 371
           RWL +ACGREHTAAV+SDGSL+TWG NDFGQLGDGTE+ RKHPKK
Sbjct: 61  RWLSIACGREHTAAVASDGSLFTWGANDFGQLGDGTEDGRKHPKK 105



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/91 (32%), Positives = 44/91 (48%)
 Frame = +3

Query: 78  GESQPVIHPSKSAIYVWGYNQSGQTGRKGKERTLRIPKQIPPKLFGCPVGVNSRWLDVAC 257
           GE           +Y WG    GQ G    +      K++ P+      G++ +  D+AC
Sbjct: 234 GEYHTAAISENGEVYTWGLGNMGQLGHCSLQYG---DKELVPRRVVALDGISIK--DIAC 288

Query: 258 GREHTAAVSSDGSLYTWGGNDFGQLGDGTEN 350
           G  HT A++S G+LY WGG   GQLG G ++
Sbjct: 289 GGVHTCALTSKGALYAWGGGQAGQLGLGPQS 319


>ref|XP_003531879.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Glycine max]
          Length = 474

 Score =  183 bits (464), Expect = 1e-44
 Identities = 82/105 (78%), Positives = 91/105 (86%)
 Frame = +3

Query: 57  MGVDEIFGESQPVIHPSKSAIYVWGYNQSGQTGRKGKERTLRIPKQIPPKLFGCPVGVNS 236
           M +D IFG  +PV  P KSAIYVWGYNQSGQTGRKGKE  LRIPKQ+PP+LFGCP G N+
Sbjct: 1   MDIDAIFGTIRPVSVPRKSAIYVWGYNQSGQTGRKGKEDQLRIPKQLPPELFGCPAGTNA 60

Query: 237 RWLDVACGREHTAAVSSDGSLYTWGGNDFGQLGDGTENRRKHPKK 371
            WLDVACGREHTAA++SDGSL+TWG NDFGQLGDGTE RRKHP+K
Sbjct: 61  CWLDVACGREHTAAIASDGSLFTWGANDFGQLGDGTEERRKHPEK 105



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 32/90 (35%), Positives = 43/90 (47%)
 Frame = +3

Query: 78  GESQPVIHPSKSAIYVWGYNQSGQTGRKGKERTLRIPKQIPPKLFGCPVGVNSRWLDVAC 257
           GE        K  +Y WG    GQ G    +      K++ P+      G+  +  DVAC
Sbjct: 234 GEYHTAAISDKGEVYTWGLGNMGQLGHSSLQYG---DKELLPRRVVTLDGIFIK--DVAC 288

Query: 258 GREHTAAVSSDGSLYTWGGNDFGQLGDGTE 347
           G  HT A++  G+LYTWGG   GQLG G +
Sbjct: 289 GGVHTCALTQGGALYTWGGGQSGQLGLGPQ 318


>ref|XP_003552611.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Glycine max]
          Length = 474

 Score =  182 bits (461), Expect = 3e-44
 Identities = 82/105 (78%), Positives = 91/105 (86%)
 Frame = +3

Query: 57  MGVDEIFGESQPVIHPSKSAIYVWGYNQSGQTGRKGKERTLRIPKQIPPKLFGCPVGVNS 236
           M +D IFG  +PV  P KSAIYVWGYNQSGQTGRKGKE  LRIPKQ+PP+LFGCP G N+
Sbjct: 1   MDIDAIFGTIRPVSVPRKSAIYVWGYNQSGQTGRKGKEDQLRIPKQLPPELFGCPAGTNA 60

Query: 237 RWLDVACGREHTAAVSSDGSLYTWGGNDFGQLGDGTENRRKHPKK 371
           RWLDVACGREHTAA++SDGSL+TWG NDFGQLGDGTE RRK P+K
Sbjct: 61  RWLDVACGREHTAAIASDGSLFTWGANDFGQLGDGTEERRKLPEK 105



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 31/90 (34%), Positives = 43/90 (47%)
 Frame = +3

Query: 78  GESQPVIHPSKSAIYVWGYNQSGQTGRKGKERTLRIPKQIPPKLFGCPVGVNSRWLDVAC 257
           GE    +   K  +Y WG    GQ G    +      K++ P+      G+  +  DVAC
Sbjct: 234 GEYHTAVISDKGEVYTWGLGNMGQLGHSSLQYG---DKELLPRRVVTLDGIFIK--DVAC 288

Query: 258 GREHTAAVSSDGSLYTWGGNDFGQLGDGTE 347
           G  HT +V+  G+LY WGG   GQLG G +
Sbjct: 289 GGVHTCSVTQGGALYAWGGGRSGQLGLGPQ 318


>ref|XP_002330952.1| predicted protein [Populus trichocarpa] gi|222873146|gb|EEF10277.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score =  176 bits (445), Expect = 2e-42
 Identities = 78/106 (73%), Positives = 95/106 (89%), Gaps = 1/106 (0%)
 Frame = +3

Query: 57  MGVDEIFGESQPVIH-PSKSAIYVWGYNQSGQTGRKGKERTLRIPKQIPPKLFGCPVGVN 233
           M ++EI GE++  ++ P+KSAIYVWGYNQSGQTGRKGK+  LRIPKQ+PP+LFGCP G N
Sbjct: 1   MDINEIVGETKRSVNFPTKSAIYVWGYNQSGQTGRKGKDGQLRIPKQLPPELFGCPAGAN 60

Query: 234 SRWLDVACGREHTAAVSSDGSLYTWGGNDFGQLGDGTENRRKHPKK 371
           +RWLD+ACGREHTAAV+SDGSL+TWG N+FGQLGDGTE+ RK+PKK
Sbjct: 61  ARWLDIACGREHTAAVASDGSLFTWGANEFGQLGDGTEDSRKYPKK 106



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/90 (34%), Positives = 41/90 (45%)
 Frame = +3

Query: 78  GESQPVIHPSKSAIYVWGYNQSGQTGRKGKERTLRIPKQIPPKLFGCPVGVNSRWLDVAC 257
           GE        K  +Y WG    GQ G    +      K++ P+      G+  +  DVAC
Sbjct: 234 GEYHTAAISEKGEVYTWGLGNMGQLGHTSLQSG---DKELLPRRVVALDGIFIK--DVAC 288

Query: 258 GREHTAAVSSDGSLYTWGGNDFGQLGDGTE 347
           G  HT A +  G+LY WGG   GQLG G +
Sbjct: 289 GGVHTCAATQKGALYAWGGGQAGQLGLGPQ 318