BLASTX nr result

ID: Bupleurum21_contig00029133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029133
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313669.1| predicted protein [Populus trichocarpa] gi|2...    55   4e-06
ref|XP_003548628.1| PREDICTED: uncharacterized protein LOC100805...    55   6e-06
ref|XP_002533502.1| conserved hypothetical protein [Ricinus comm...    54   1e-05

>ref|XP_002313669.1| predicted protein [Populus trichocarpa] gi|222850077|gb|EEE87624.1|
           predicted protein [Populus trichocarpa]
          Length = 289

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
 Frame = -1

Query: 255 RRKKVTDPLDDKVKARIFGEPV-YISSGSEHSSQNDDVDGESPCLS 121
           R K+VTDPLDDK KAR+ G  + Y+SSGSEHS+ +DD   + PCLS
Sbjct: 6   RSKRVTDPLDDKAKARLVGRQLSYVSSGSEHSADDDD---DLPCLS 48


>ref|XP_003548628.1| PREDICTED: uncharacterized protein LOC100805677 [Glycine max]
          Length = 299

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/53 (52%), Positives = 36/53 (67%), Gaps = 5/53 (9%)
 Frame = -1

Query: 264 IIARRKKVTDPLDDKVKARIFG-----EPVYISSGSEHSSQNDDVDGESPCLS 121
           ++AR+K+VTDP DD+ KAR+ G     +  Y+SSGSEHS      DG SPCLS
Sbjct: 3   VLARKKRVTDPFDDEAKARLVGGGDHRQLSYVSSGSEHSGNG---DGHSPCLS 52


>ref|XP_002533502.1| conserved hypothetical protein [Ricinus communis]
           gi|223526646|gb|EEF28889.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 285

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 30/53 (56%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
 Frame = -1

Query: 273 MATIIARRKKVTDPLDDKVKARIFG--EPVYISSGSEHSSQNDDVDGESPCLS 121
           M+    RRK+VTDPLDD  KAR+ G  +  Y+SSGSEHS+     D ESPCLS
Sbjct: 1   MSGFCVRRKRVTDPLDDDAKARLIGGQQLSYVSSGSEHSA-----DVESPCLS 48


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