BLASTX nr result

ID: Bupleurum21_contig00029127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029127
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30411.3| unnamed protein product [Vitis vinifera]               76   2e-12
ref|XP_002316037.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002319926.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_002319925.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]    65   4e-09

>emb|CBI30411.3| unnamed protein product [Vitis vinifera]
          Length = 287

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 47/100 (47%), Positives = 59/100 (59%), Gaps = 1/100 (1%)
 Frame = -2

Query: 494 DKHQLVEMLLVDGCFILELFLRCKMTDMQKTNDERFPIPPEDQVPFVSLAGNFTMVLTLA 315
           +K +L EMLLVDGCFILELFLR  + D    +D  F               N  MV TL 
Sbjct: 142 NKKELAEMLLVDGCFILELFLRRSLRDFVDKSDPIF--------------NNAWMVPTLQ 187

Query: 314 HDLMLLENQIPYVVLQQLFN-ILPSSKQTSNDMFSEMSLS 198
           HDL LLENQIP+ VLQ L+  ILP + +T   +F+ ++LS
Sbjct: 188 HDLALLENQIPFFVLQNLYEFILPFAPKTLPRLFTALALS 227


>ref|XP_002316037.1| predicted protein [Populus trichocarpa] gi|222865077|gb|EEF02208.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 35/94 (37%), Positives = 56/94 (59%)
 Frame = -2

Query: 500 NLDKHQLVEMLLVDGCFILELFLRCKMTDMQKTNDERFPIPPEDQVPFVSLAGNFTMVLT 321
           N+   + ++M+LVDGCFI+ELFL+  +  +++ ND  F  P               M+  
Sbjct: 90  NVTDDEFLQMMLVDGCFIIELFLKYSIKSLRRRNDPVFTTP--------------GMLFD 135

Query: 320 LAHDLMLLENQIPYVVLQQLFNILPSSKQTSNDM 219
           L  +LMLLENQIP  +LQ+LF ++P+ KQ ++ +
Sbjct: 136 LRSNLMLLENQIPLFILQRLFEVVPTPKQCTHSL 169


>ref|XP_002319926.1| predicted protein [Populus trichocarpa] gi|222858302|gb|EEE95849.1|
           predicted protein [Populus trichocarpa]
          Length = 429

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 38/81 (46%), Positives = 47/81 (58%)
 Frame = -2

Query: 494 DKHQLVEMLLVDGCFILELFLRCKMTDMQKTNDERFPIPPEDQVPFVSLAGNFTMVLTLA 315
           +K+ L +MLLVDGCFILELFLR  M D++  +D  F                  MVLTL 
Sbjct: 118 EKYDLAKMLLVDGCFILELFLRFSMADLRLQDDPVF--------------NTSWMVLTLR 163

Query: 314 HDLMLLENQIPYVVLQQLFNI 252
            DL LLENQIP+  L+ LF +
Sbjct: 164 RDLALLENQIPFFALEWLFKL 184


>ref|XP_002319925.1| predicted protein [Populus trichocarpa] gi|222858301|gb|EEE95848.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 38/81 (46%), Positives = 47/81 (58%)
 Frame = -2

Query: 494 DKHQLVEMLLVDGCFILELFLRCKMTDMQKTNDERFPIPPEDQVPFVSLAGNFTMVLTLA 315
           +K+ L +MLLVDGCFILELFLR  M D++  +D  F                  MVLTL 
Sbjct: 49  EKYDLAKMLLVDGCFILELFLRFSMADLRLQDDPVF--------------NTSWMVLTLR 94

Query: 314 HDLMLLENQIPYVVLQQLFNI 252
            DL LLENQIP+  L+ LF +
Sbjct: 95  RDLALLENQIPFFALEWLFKL 115


>emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]
          Length = 439

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 44/117 (37%), Positives = 65/117 (55%), Gaps = 1/117 (0%)
 Frame = -2

Query: 494 DKHQLVEMLLVDGCFILELFLRCKMTDMQKTNDERFPIPPEDQVPFVSLAGNFTMVLTLA 315
           D  + V M+L+DGCFI+ELFL+ K   ++  +D  F               N TMVLT  
Sbjct: 124 DSDEFVTMMLLDGCFIIELFLKNKNKQLRDEDDPIF---------------NRTMVLTDL 168

Query: 314 H-DLMLLENQIPYVVLQQLFNILPSSKQTSNDMFSEMSLSEYAIWFLILRQCCIINS 147
           H DL+LLENQ+P+ VL+ LFN++ ++ Q      S + L+     FL L++  I +S
Sbjct: 169 HRDLILLENQLPFFVLETLFNLIENTDQ-EGPSTSVLELTYVFFKFLGLQEVLIRDS 224


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