BLASTX nr result

ID: Bupleurum21_contig00029120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029120
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39588.3| unnamed protein product [Vitis vinifera]               69   3e-10
ref|XP_002277995.1| PREDICTED: peptide chain release factor 2-li...    69   3e-10
emb|CAN69654.1| hypothetical protein VITISV_010541 [Vitis vinifera]    69   3e-10
ref|XP_002512504.1| peptide chain release factor, putative [Rici...    60   2e-07
ref|XP_002319484.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07

>emb|CBI39588.3| unnamed protein product [Vitis vinifera]
          Length = 472

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/35 (91%), Positives = 33/35 (94%)
 Frame = -3

Query: 105 GSQAAVELSTSDGLTVEGIISNQWPILDESESDWK 1
           GSQAA E STSDGLTVEGII+NQWPILDESESDWK
Sbjct: 70  GSQAAAEASTSDGLTVEGIIANQWPILDESESDWK 104


>ref|XP_002277995.1| PREDICTED: peptide chain release factor 2-like [Vitis vinifera]
          Length = 434

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/35 (91%), Positives = 33/35 (94%)
 Frame = -3

Query: 105 GSQAAVELSTSDGLTVEGIISNQWPILDESESDWK 1
           GSQAA E STSDGLTVEGII+NQWPILDESESDWK
Sbjct: 32  GSQAAAEASTSDGLTVEGIIANQWPILDESESDWK 66


>emb|CAN69654.1| hypothetical protein VITISV_010541 [Vitis vinifera]
          Length = 426

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/35 (91%), Positives = 33/35 (94%)
 Frame = -3

Query: 105 GSQAAVELSTSDGLTVEGIISNQWPILDESESDWK 1
           GSQAA E STSDGLTVEGII+NQWPILDESESDWK
Sbjct: 24  GSQAAAEASTSDGLTVEGIIANQWPILDESESDWK 58


>ref|XP_002512504.1| peptide chain release factor, putative [Ricinus communis]
           gi|223548465|gb|EEF49956.1| peptide chain release
           factor, putative [Ricinus communis]
          Length = 550

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/34 (76%), Positives = 32/34 (94%)
 Frame = -3

Query: 102 SQAAVELSTSDGLTVEGIISNQWPILDESESDWK 1
           +QAAVELST+DGLTV+GI++N W ILDE+ESDWK
Sbjct: 103 TQAAVELSTTDGLTVDGIVANNWIILDENESDWK 136


>ref|XP_002319484.1| predicted protein [Populus trichocarpa] gi|222857860|gb|EEE95407.1|
           predicted protein [Populus trichocarpa]
          Length = 488

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 25/34 (73%), Positives = 31/34 (91%)
 Frame = -3

Query: 102 SQAAVELSTSDGLTVEGIISNQWPILDESESDWK 1
           +QAA ELSTSDG+TV+GI+++ W ILDESESDWK
Sbjct: 85  TQAAAELSTSDGITVDGIVASNWTILDESESDWK 118


Top