BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029103
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272104.1| PREDICTED: pentatricopeptide repeat-containi...    84   9e-15
ref|XP_004136798.1| PREDICTED: pentatricopeptide repeat-containi...    80   2e-13
ref|XP_003634851.1| PREDICTED: pentatricopeptide repeat-containi...    65   6e-09
emb|CAN77919.1| hypothetical protein VITISV_027645 [Vitis vinifera]    65   6e-09
ref|XP_003634853.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    64   1e-08

>ref|XP_002272104.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial [Vitis vinifera]
           gi|297738261|emb|CBI27462.3| unnamed protein product
           [Vitis vinifera]
          Length = 386

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 50/126 (39%), Positives = 77/126 (61%), Gaps = 1/126 (0%)
 Frame = +3

Query: 63  LSRLFRPLNRIQCFSTLSSPTRSFRSIKSAIKSESDPVKIAELF-SSPAPVATFQRHRPL 239
           L R+ R L  +  FSTLS P  +F + KSA++SE DP K+A +F    +  A F+RHRPL
Sbjct: 4   LCRIPRRLLSLARFSTLSDPFTTFLAAKSAVESEPDPEKLAHIFHHQSSNFARFRRHRPL 63

Query: 240 LHLAVRKLSRFKRPELIEQVLNTIISTSTDTQLNSETFWSHMIVLYGEAGMVNNAHQVFD 419
             L+ R+LSR  R +L+E++++      T     +E FW  +I+LY  +GMV++A + F 
Sbjct: 64  YQLSCRRLSRSGRLDLVERLID---HQKTLPHPRTEGFWIRLIMLYSTSGMVDHALRTFH 120

Query: 420 RMLHLR 437
           +M+  R
Sbjct: 121 QMVQDR 126


>ref|XP_004136798.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Cucumis sativus]
           gi|449494815|ref|XP_004159654.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Cucumis sativus]
          Length = 405

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 51/139 (36%), Positives = 79/139 (56%), Gaps = 9/139 (6%)
 Frame = +3

Query: 39  MAVQLFTRLSRLFRPLNRIQCFS---------TLSSPTRSFRSIKSAIKSESDPVKIAEL 191
           MA  L     RLF  ++R+  FS         T  SP  S R+ KSAI S+SDP K+A+ 
Sbjct: 1   MAAALPRTPRRLFL-ISRLHSFSYSTTPPLQPTSDSPFPSLRAAKSAILSQSDPDKLAQS 59

Query: 192 FSSPAPVATFQRHRPLLHLAVRKLSRFKRPELIEQVLNTIISTSTDTQLNSETFWSHMIV 371
           F   + + +F R+RP+ H ++RKL+R +R +LI+ ++ +   + + T   SE FW  +I+
Sbjct: 60  FIQASTLPSFCRYRPIYHQSIRKLARAQRFDLIDVIIQSHHKSPSAT---SEGFWIRLIM 116

Query: 372 LYGEAGMVNNAHQVFDRML 428
           LY   GMVN A  + D+ +
Sbjct: 117 LYSSVGMVNQALYILDQAI 135


>ref|XP_003634851.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Vitis vinifera]
          Length = 396

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 50/156 (32%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
 Frame = +3

Query: 63  LSRLFRPLNRIQC--FSTLSSPTRSF--------RSIKSAIKSESDPVKIAELFSSPAPV 212
           LSRL RP++  +C  FS++ SP  +         R+  S +KSE DP +I E+  + A  
Sbjct: 4   LSRL-RPISSHRCRFFSSILSPDSATPLSSKEKSRAALSLLKSEQDPQRILEICRAAALT 62

Query: 213 ATFQRHRPLLHLAVRKLSRFKRPELIEQVLNTIISTSTDTQLNSETFWSHMIVLYGEAGM 392
                 R    +A+ KL+  K  + I   L+ +        L +E F SH IVL+G+AGM
Sbjct: 63  PESHLDRVAFSVAISKLADSKHFDSIRHFLDEL---KARPDLRTERFVSHAIVLFGQAGM 119

Query: 393 VNNAHQVFDRMLHLRPLPSIDQFNQLLTALVRMKEY 500
           +N+A + F++M  L    ++   N LL + +  K Y
Sbjct: 120 LNDAVRTFEQMHQLGVDRTVRSLNALLFSCILAKNY 155


>emb|CAN77919.1| hypothetical protein VITISV_027645 [Vitis vinifera]
          Length = 396

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 50/156 (32%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
 Frame = +3

Query: 63  LSRLFRPLNRIQC--FSTLSSPTRSF--------RSIKSAIKSESDPVKIAELFSSPAPV 212
           LSRL RP++  +C  FS++ SP  +         R+  S +KSE DP +I E+  + A  
Sbjct: 4   LSRL-RPISSHRCRFFSSILSPDSATPLSSKEKSRAALSLLKSEQDPQRILEICRAAALT 62

Query: 213 ATFQRHRPLLHLAVRKLSRFKRPELIEQVLNTIISTSTDTQLNSETFWSHMIVLYGEAGM 392
                 R    +A+ KL+  K  + I   L+ +        L +E F SH IVL+G+AGM
Sbjct: 63  PESHLDRVAFSVAISKLADSKHFDSIRHFLDEL---KARPDLRTERFVSHAIVLFGQAGM 119

Query: 393 VNNAHQVFDRMLHLRPLPSIDQFNQLLTALVRMKEY 500
           +N+A + F++M  L    ++   N LL + +  K Y
Sbjct: 120 LNDAVRTFEQMHQLGVDRTVRSLNALLFSCILAKNY 155


>ref|XP_003634853.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g61870, mitochondrial-like [Vitis vinifera]
          Length = 336

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
 Frame = +3

Query: 63  LSRLFRPLNRIQC--FSTLSSPTRSF--------RSIKSAIKSESDPVKIAELFSSPAPV 212
           LSRL RP+   +C  FS++ SP  +         R+  S +KSE DP +I E+  + A  
Sbjct: 4   LSRL-RPIYSHRCRFFSSILSPDSATPLSSKEKSRAALSLLKSEQDPQRILEICRAAALT 62

Query: 213 ATFQRHRPLLHLAVRKLSRFKRPELIEQVLNTIISTSTDTQLNSETFWSHMIVLYGEAGM 392
                 R    +A+ KL+  K  + I   L+ +        L +E F SH IVL+G+AGM
Sbjct: 63  PESHLDRVAFSVAISKLADSKHFDSIRHFLDEL---KARPDLRTERFVSHAIVLFGQAGM 119

Query: 393 VNNAHQVFDRMLHLRPLPSIDQFNQLLTALVRMKEY 500
           +N+A + F++M  L    ++   N LL + +  K Y
Sbjct: 120 LNDAVRTFEQMHQLGVDRTVRSLNALLFSCILAKNY 155