BLASTX nr result

ID: Bupleurum21_contig00029097 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029097
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ44457.1| ALY protein [Nicotiana benthamiana]                   147   7e-34
emb|CAG26902.1| ALY protein [Nicotiana benthamiana]                   142   2e-32
ref|XP_002284215.1| PREDICTED: RNA and export factor-binding pro...   142   3e-32
emb|CAN83715.1| hypothetical protein VITISV_023787 [Vitis vinifera]   142   3e-32
ref|XP_004149042.1| PREDICTED: RNA and export factor-binding pro...   142   4e-32

>emb|CAJ44457.1| ALY protein [Nicotiana benthamiana]
          Length = 246

 Score =  147 bits (372), Expect = 7e-34
 Identities = 72/114 (63%), Positives = 88/114 (77%), Gaps = 2/114 (1%)
 Frame = -2

Query: 337 KRSLPYDRVKVHAPETKWTHDMFARHDVSYPATFNRQ--SYVETGTKLLISNLDYGVSDE 164
           KRS PY    VHAPE+ W HDMFA H  +YPA       S +ETG KLLISNLDYGVS+E
Sbjct: 48  KRSAPYSSGPVHAPESTWDHDMFAEHAPAYPAARGAGGISGIETGIKLLISNLDYGVSNE 107

Query: 163 DIKDLFSDIGLLTKHTVDYDKSGRSKGTAVVVYLRREDAEAAVKRYNNIQLDGK 2
           DIK+LFS+ G + ++++ YDKSGRSKGTA V++ RR DAEAA+K+YNN+QLDGK
Sbjct: 108 DIKELFSEAGDIKRYSIHYDKSGRSKGTAEVIFSRRRDAEAAIKKYNNVQLDGK 161


>emb|CAG26902.1| ALY protein [Nicotiana benthamiana]
          Length = 249

 Score =  142 bits (359), Expect = 2e-32
 Identities = 69/113 (61%), Positives = 87/113 (76%), Gaps = 2/113 (1%)
 Frame = -2

Query: 334 RSLPYDRVKVHAPETKWTHDMFARHDVSYPATFNRQ--SYVETGTKLLISNLDYGVSDED 161
           RS PY    VHAP++ W H+MFA H  +YPA       S +ETG KLLISNLDYGVS+ED
Sbjct: 52  RSAPYSSGPVHAPDSTWDHNMFAEHAPAYPAARGAGGISGIETGIKLLISNLDYGVSNED 111

Query: 160 IKDLFSDIGLLTKHTVDYDKSGRSKGTAVVVYLRREDAEAAVKRYNNIQLDGK 2
           IK+LFS+ G + ++++ YDKSGRSKGTA V++ RR DAEAA+K+YNN+QLDGK
Sbjct: 112 IKELFSEAGDIKRYSIHYDKSGRSKGTAEVIFSRRRDAEAAIKKYNNVQLDGK 164


>ref|XP_002284215.1| PREDICTED: RNA and export factor-binding protein 2 [Vitis vinifera]
           gi|297746115|emb|CBI16171.3| unnamed protein product
           [Vitis vinifera]
          Length = 243

 Score =  142 bits (358), Expect = 3e-32
 Identities = 72/111 (64%), Positives = 85/111 (76%)
 Frame = -2

Query: 334 RSLPYDRVKVHAPETKWTHDMFARHDVSYPATFNRQSYVETGTKLLISNLDYGVSDEDIK 155
           R  PY   K  APET W HDMFA    +YPA   R S +ETGTKL ISNLDYGVS+EDIK
Sbjct: 47  RITPYSVSK--APETTWQHDMFADQAAAYPAQAGRTSAIETGTKLYISNLDYGVSNEDIK 104

Query: 154 DLFSDIGLLTKHTVDYDKSGRSKGTAVVVYLRREDAEAAVKRYNNIQLDGK 2
           +LFS++G L ++++ YD+SGRSKGTA VV+ RR DA AAVKRYNN+QLDGK
Sbjct: 105 ELFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGK 155


>emb|CAN83715.1| hypothetical protein VITISV_023787 [Vitis vinifera]
          Length = 281

 Score =  142 bits (358), Expect = 3e-32
 Identities = 72/111 (64%), Positives = 85/111 (76%)
 Frame = -2

Query: 334 RSLPYDRVKVHAPETKWTHDMFARHDVSYPATFNRQSYVETGTKLLISNLDYGVSDEDIK 155
           R  PY   K  APET W HDMFA    +YPA   R S +ETGTKL ISNLDYGVS+EDIK
Sbjct: 47  RITPYSVSK--APETTWQHDMFADQAAAYPAQAGRTSAIETGTKLYISNLDYGVSNEDIK 104

Query: 154 DLFSDIGLLTKHTVDYDKSGRSKGTAVVVYLRREDAEAAVKRYNNIQLDGK 2
           +LFS++G L ++++ YD+SGRSKGTA VV+ RR DA AAVKRYNN+QLDGK
Sbjct: 105 ELFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGK 155


>ref|XP_004149042.1| PREDICTED: RNA and export factor-binding protein 2-like [Cucumis
           sativus]
          Length = 237

 Score =  142 bits (357), Expect = 4e-32
 Identities = 67/111 (60%), Positives = 88/111 (79%)
 Frame = -2

Query: 334 RSLPYDRVKVHAPETKWTHDMFARHDVSYPATFNRQSYVETGTKLLISNLDYGVSDEDIK 155
           R+ PY   K  APET W+HDMF  H  +YP+   R S +ETGTKL +SNLDYGVS+EDIK
Sbjct: 47  RATPYSTSK--APETAWSHDMFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDIK 104

Query: 154 DLFSDIGLLTKHTVDYDKSGRSKGTAVVVYLRREDAEAAVKRYNNIQLDGK 2
           +LFS++G + +++++YDKSGRSKGTA +V+ R+ DA AA+KRYNN+QLDGK
Sbjct: 105 ELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGK 155


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