BLASTX nr result

ID: Bupleurum21_contig00029092 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029092
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29398.3| unnamed protein product [Vitis vinifera]              131   5e-29
emb|CAN74932.1| hypothetical protein VITISV_044432 [Vitis vinifera]   120   1e-25
ref|XP_002865048.1| predicted protein [Arabidopsis lyrata subsp....   116   2e-24
ref|NP_201485.1| SAP domain-containing protein [Arabidopsis thal...   115   4e-24
ref|XP_004169048.1| PREDICTED: zinc finger CCCH domain-containin...   113   2e-23

>emb|CBI29398.3| unnamed protein product [Vitis vinifera]
          Length = 215

 Score =  131 bits (330), Expect = 5e-29
 Identities = 58/86 (67%), Positives = 71/86 (82%)
 Frame = -1

Query: 259 DDETDKQEVIYSQIMRLLREGSPLEELNLNECKTYLRKHKLRLSGTKEECINRIKEHWRI 80
           DD+ D  + I ++++RLL+EGS ++EL L ECK YLRKH LR++GTKE CI RIKEHWRI
Sbjct: 69  DDDDDNDDYICNRVIRLLQEGSDIKELKLKECKVYLRKHGLRITGTKEVCIERIKEHWRI 128

Query: 79  KDGNVEALYPRSSFNINCTGDVCKGD 2
           KDGN E LYP+SSF +NCTGDVCKGD
Sbjct: 129 KDGNGEVLYPKSSFFVNCTGDVCKGD 154


>emb|CAN74932.1| hypothetical protein VITISV_044432 [Vitis vinifera]
          Length = 486

 Score =  120 bits (301), Expect = 1e-25
 Identities = 59/104 (56%), Positives = 73/104 (70%), Gaps = 7/104 (6%)
 Frame = -1

Query: 292 DVSSSSLYNDCDDETD----KQEVIY---SQIMRLLREGSPLEELNLNECKTYLRKHKLR 134
           D     L +D DD+ D     + +I+   +  + L+ EGS ++EL L ECK YLRKH LR
Sbjct: 73  DDDEEDLEDDDDDDNDDYICNRALIFCIRNSAVNLVSEGSDIKELKLKECKVYLRKHGLR 132

Query: 133 LSGTKEECINRIKEHWRIKDGNVEALYPRSSFNINCTGDVCKGD 2
           ++GTKE CI RIKEHWRIKDGN E LYP+SSF +NCTGDVCKGD
Sbjct: 133 ITGTKEVCIERIKEHWRIKDGNGEVLYPKSSFFVNCTGDVCKGD 176


>ref|XP_002865048.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310883|gb|EFH41307.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 554

 Score =  116 bits (290), Expect = 2e-24
 Identities = 57/88 (64%), Positives = 65/88 (73%)
 Frame = -1

Query: 265 DCDDETDKQEVIYSQIMRLLREGSPLEELNLNECKTYLRKHKLRLSGTKEECINRIKEHW 86
           D DDE DK       + RLL  GS L+ +N+ ECK YLRKH LRLSGTK  CI+RI EHW
Sbjct: 66  DDDDEDDK-------VTRLLTAGSDLKSVNVKECKAYLRKHGLRLSGTKPVCIDRIVEHW 118

Query: 85  RIKDGNVEALYPRSSFNINCTGDVCKGD 2
           RIKDG+ EA+YPR+SF INC GDVCKGD
Sbjct: 119 RIKDGSGEAVYPRASFAINCKGDVCKGD 146


>ref|NP_201485.1| SAP domain-containing protein [Arabidopsis thaliana]
           gi|9758134|dbj|BAB08626.1| unnamed protein product
           [Arabidopsis thaliana] gi|332010887|gb|AED98270.1| SAP
           domain-containing protein [Arabidopsis thaliana]
          Length = 551

 Score =  115 bits (288), Expect = 4e-24
 Identities = 57/89 (64%), Positives = 64/89 (71%)
 Frame = -1

Query: 268 NDCDDETDKQEVIYSQIMRLLREGSPLEELNLNECKTYLRKHKLRLSGTKEECINRIKEH 89
           ND  DE DK       + RLL  GS L+ +N+ ECK YLRKH LRLSGTK  CI+RI EH
Sbjct: 71  NDDGDEDDK-------VTRLLTAGSDLKSVNVKECKAYLRKHGLRLSGTKPVCIDRILEH 123

Query: 88  WRIKDGNVEALYPRSSFNINCTGDVCKGD 2
           WRIKDG  EA+YP+SSF INC GDVCKGD
Sbjct: 124 WRIKDGTGEAVYPKSSFAINCKGDVCKGD 152


>ref|XP_004169048.1| PREDICTED: zinc finger CCCH domain-containing protein 62-like
           [Cucumis sativus]
          Length = 303

 Score =  113 bits (282), Expect = 2e-23
 Identities = 51/102 (50%), Positives = 70/102 (68%)
 Frame = -1

Query: 307 GEFVEDVSSSSLYNDCDDETDKQEVIYSQIMRLLREGSPLEELNLNECKTYLRKHKLRLS 128
           GE  E+  +    N CD      EV+  +++R L+E   L+ L LN+CK YLR+ +LR++
Sbjct: 51  GESGEEFDNEESDNGCD------EVLSKRVIRFLKENKNLDSLTLNDCKAYLRESRLRIA 104

Query: 127 GTKEECINRIKEHWRIKDGNVEALYPRSSFNINCTGDVCKGD 2
           GTK  CI R+KEHWR+KDG+ E  YP+SSF +NCTGDVC+GD
Sbjct: 105 GTKAVCIQRVKEHWRLKDGDGEVQYPKSSFVVNCTGDVCRGD 146


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