BLASTX nr result

ID: Bupleurum21_contig00029088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029088
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330598.1| predicted protein [Populus trichocarpa] gi|2...   108   6e-22
ref|XP_003537070.1| PREDICTED: kinesin-4-like [Glycine max]           107   1e-21
ref|XP_003530813.1| PREDICTED: kinesin-4-like [Glycine max]           103   1e-20
ref|XP_002300575.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
emb|CBI39798.3| unnamed protein product [Vitis vinifera]              102   2e-20

>ref|XP_002330598.1| predicted protein [Populus trichocarpa] gi|222872156|gb|EEF09287.1|
           predicted protein [Populus trichocarpa]
          Length = 1129

 Score =  108 bits (269), Expect = 6e-22
 Identities = 53/87 (60%), Positives = 65/87 (74%)
 Frame = +1

Query: 1   NGSEEFPLNSMVIDTVIRTAVKRFFTMVSSQGNQLGIHFKKILKGDGSPLSKSEFLEAIT 180
           NG EE PLN MVIDT++R AVK F  ++ SQG QLG+  KKILKGD   LSK+EF+EAI+
Sbjct: 261 NGIEELPLNGMVIDTLLRKAVKDFSALLVSQGTQLGLFLKKILKGDIGSLSKNEFIEAIS 320

Query: 181 NYLRRRTSLVSGDVSRFCICGRKYDAM 261
            YLR+R SL S D S+FCICG K + +
Sbjct: 321 QYLRQRASLASSDFSKFCICGGKRETI 347


>ref|XP_003537070.1| PREDICTED: kinesin-4-like [Glycine max]
          Length = 1139

 Score =  107 bits (266), Expect = 1e-21
 Identities = 60/125 (48%), Positives = 79/125 (63%), Gaps = 1/125 (0%)
 Frame = +1

Query: 1   NGSEEFPLNSMVIDTVIRTAVKRFFTMVSSQGNQLGIHFKKILKGDGSPLSKSEFLEAIT 180
           NG E+ PLN+MVIDT++   VK F +++ SQGNQLG+  KKILKGD   LSK EF+EAI+
Sbjct: 266 NGIEDLPLNAMVIDTLLSKVVKDFSSLLVSQGNQLGLFLKKILKGDIGCLSKREFIEAIS 325

Query: 181 NYLRRRTSLVSGDVSRFCICGRKYDAMWQ-VDPNXXXXXXXXXXXXXXXXXXSSFEETKL 357
            YL +R+SL S D S+FC CG K D++ Q  + +                    FEETKL
Sbjct: 326 LYLNQRSSLASNDFSKFCNCGGKRDSIRQNANYSEKYVEVINTQQKQLEGMKYFFEETKL 385

Query: 358 EVQQV 372
           EV+Q+
Sbjct: 386 EVRQI 390


>ref|XP_003530813.1| PREDICTED: kinesin-4-like [Glycine max]
          Length = 1140

 Score =  103 bits (257), Expect = 1e-20
 Identities = 59/125 (47%), Positives = 78/125 (62%), Gaps = 1/125 (0%)
 Frame = +1

Query: 1   NGSEEFPLNSMVIDTVIRTAVKRFFTMVSSQGNQLGIHFKKILKGDGSPLSKSEFLEAIT 180
           NG E+ PLN+MVIDT++   VK F +++ SQGNQLG+  KKILK D   LSK EF+EAI+
Sbjct: 265 NGIEDLPLNAMVIDTLLSKVVKDFSSLLVSQGNQLGLFLKKILKVDIGCLSKREFIEAIS 324

Query: 181 NYLRRRTSLVSGDVSRFCICGRKYDAMWQ-VDPNXXXXXXXXXXXXXXXXXXSSFEETKL 357
            YL +R+SL S D S+FC CG K D++ Q  + +                    FEETKL
Sbjct: 325 LYLNQRSSLASNDFSKFCNCGGKRDSIRQNANYSAKYVEVINTQQKQLEGMKYFFEETKL 384

Query: 358 EVQQV 372
           EV+Q+
Sbjct: 385 EVRQI 389


>ref|XP_002300575.1| predicted protein [Populus trichocarpa] gi|222847833|gb|EEE85380.1|
           predicted protein [Populus trichocarpa]
          Length = 969

 Score =  103 bits (257), Expect = 1e-20
 Identities = 50/93 (53%), Positives = 65/93 (69%)
 Frame = +1

Query: 1   NGSEEFPLNSMVIDTVIRTAVKRFFTMVSSQGNQLGIHFKKILKGDGSPLSKSEFLEAIT 180
           NG EE PLN MV+D ++   VK F  ++ SQG QLG+  KKILKGD   LSK+EF+EAI+
Sbjct: 201 NGIEELPLNGMVVDALLSKVVKDFSALLVSQGTQLGLLLKKILKGDIGSLSKTEFIEAIS 260

Query: 181 NYLRRRTSLVSGDVSRFCICGRKYDAMWQVDPN 279
            YLR+RTSL S D S+FC+CG K + +  +  N
Sbjct: 261 QYLRQRTSLASSDFSKFCVCGGKKETIRHIVSN 293


>emb|CBI39798.3| unnamed protein product [Vitis vinifera]
          Length = 1114

 Score =  102 bits (255), Expect = 2e-20
 Identities = 58/125 (46%), Positives = 76/125 (60%), Gaps = 1/125 (0%)
 Frame = +1

Query: 1   NGSEEFPLNSMVIDTVIRTAVKRFFTMVSSQGNQLGIHFKKILKGDGSPLSKSEFLEAIT 180
           NG E++PLN MVIDT++R  V+ F   + SQ NQLG+  KKILKGD  PLSK EFLEAIT
Sbjct: 323 NGIEDWPLNEMVIDTLLRKVVEDFSGQIVSQYNQLGMILKKILKGDTIPLSKHEFLEAIT 382

Query: 181 NYLRRRTSLVSGDVSRFCICGRKYDAMWQVDP-NXXXXXXXXXXXXXXXXXXSSFEETKL 357
            YL ++ SL   ++S+FCICG K + +   +  +                  S F ETKL
Sbjct: 383 QYLDKKNSLALSNLSKFCICGGKREVVRHSNNLSADHAQLLNLHQRQVQELKSFFHETKL 442

Query: 358 EVQQV 372
           EV+Q+
Sbjct: 443 EVKQI 447


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