BLASTX nr result

ID: Bupleurum21_contig00029061 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029061
         (1216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79963.1| hypothetical protein VITISV_024480 [Vitis vinifera]   215   2e-53
ref|XP_002517560.1| conserved hypothetical protein [Ricinus comm...   213   1e-52
ref|XP_002299614.1| predicted protein [Populus trichocarpa] gi|2...   209   1e-51
emb|CBI36241.3| unnamed protein product [Vitis vinifera]              209   1e-51
ref|XP_002308622.1| predicted protein [Populus trichocarpa] gi|2...   207   4e-51

>emb|CAN79963.1| hypothetical protein VITISV_024480 [Vitis vinifera]
          Length = 385

 Score =  215 bits (548), Expect = 2e-53
 Identities = 139/382 (36%), Positives = 198/382 (51%), Gaps = 18/382 (4%)
 Frame = +3

Query: 99   LHEIKSEQDNLEFSWGYKLGKGGVNNNVHMYESFTFDGVEYSLFDCVYMWRDDLHEPNVG 278
            LH  ++ + + +F WG K G GG N ++  YESFT+DGVEY L+DCVY+++    E  +G
Sbjct: 2    LHPSRANEHSYDFKWGIKSGMGGKNRDLQFYESFTYDGVEYFLYDCVYLYQTGQLETYIG 61

Query: 279  KLVKVWETPSHKKKVKTVWFFRPNEILNWLGDVKPLENELFLASGEG------------- 419
            KLV++WETP+ +KKVK VWFFRP +I   LGD  P  NE+FLASGEG             
Sbjct: 62   KLVRIWETPTREKKVKIVWFFRPVDIRRHLGDDVPHWNEIFLASGEGDPRWLGMGSVVRE 121

Query: 420  -VGVF--NINPLESICGKCEVVCTSDDRRNLQASEEELKKADYIFYRTFDVGSYKISKNF 590
              G F  +++  E++ GKC+VVCTS+D+RN + S+ EL++ADYIFYRTFD+GS KIS NF
Sbjct: 122  HYGTFFQDMHEKEALGGKCKVVCTSNDKRNPRVSQVELREADYIFYRTFDIGSLKISDNF 181

Query: 591  SFDSIAGHQVEHFFNKRNDQK-LKRLNVEANLNQDARKVGNPAKAVKYNYSDRTVSAREL 767
            + D I G +VE+FFN++ DQK L   N++ANL    + + + +K+         +  R+L
Sbjct: 182  A-DLIDGIKVEYFFNRKKDQKLLNPRNIKANLEVRTQTIDSTSKSDMSTLDMWPLKKRKL 240

Query: 768  ETASSLGKKDHFPYENTGLRPKAILKPVRNGSANTSPCRLVVKTTSRKVRFSEDLPHANE 947
              ++          E  GL P            NTSP                       
Sbjct: 241  LLSTE--------KELPGLGP------------NTSP----------------------- 257

Query: 948  PDMHPSKKRMLFKNSVSLGSNEELANCADLLPSLPDHIQNLLNFKHCTDEG-GLSKGVNI 1124
            P     +  M     + + S  +       LP LP H +  LN K  T +     K V  
Sbjct: 258  PSELGERSNMRTLLPLRIASKRDPEKLTVXLPGLPKHEEKNLNPKDSTSQNRARPKKVKF 317

Query: 1125 NTKASTNIDNRGNQSEHPKGLR 1190
            + KA T  D   +Q    +G++
Sbjct: 318  DEKAITIPDKAASQPAQNEGIK 339


>ref|XP_002517560.1| conserved hypothetical protein [Ricinus communis]
           gi|223543192|gb|EEF44724.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 508

 Score =  213 bits (541), Expect = 1e-52
 Identities = 124/288 (43%), Positives = 167/288 (57%)
 Frame = +3

Query: 135 FSWGYKLGKGGVNNNVHMYESFTFDGVEYSLFDCVYMWRDDLHEPNVGKLVKVWETPSHK 314
           F WG K      N +   Y+SFT+ GVEY L+DCVY    D     +GKLV+++ETP+ +
Sbjct: 5   FKWGIKKADSRTNKDFKFYQSFTYCGVEYYLYDCVYFHGKDSVNSYIGKLVRIYETPAKE 64

Query: 315 KKVKTVWFFRPNEILNWLGDVKPLENELFLASGEGVGVFNINPLESICGKCEVVCTSDDR 494
           KKVK VWFF P+EI  +LGD +P  NE+FLASG+G G+ NIN LE+I GKC VVC S+D 
Sbjct: 65  KKVKVVWFFHPSEISKFLGDYEPKWNEVFLASGQGEGLSNINHLEAIVGKCNVVCVSNDN 124

Query: 495 RNLQASEEELKKADYIFYRTFDVGSYKISKNFSFDSIAGHQVEHFFNKRNDQKLKRLNVE 674
           RN QA+E ELK AD+IFYR FDVG  +I ++F+ + I G +VE FFNKR DQ   ++N  
Sbjct: 125 RNPQATEVELKMADFIFYRCFDVGERRIVEDFA-NHIDGIRVESFFNKRKDQ---QVNAP 180

Query: 675 ANLNQDARKVGNPAKAVKYNYSDRTVSARELETASSLGKKDHFPYENTGLRPKAILKPVR 854
             L  + +K G+  + VK   S   V        +SL  K+    EN   RP+  +   R
Sbjct: 181 PALELNVKKGGHAVRDVKSGSSSSPV------VKASLRLKERILNENITRRPRTPIDNDR 234

Query: 855 NGSANTSPCRLVVKTTSRKVRFSEDLPHANEPDMHPSKKRMLFKNSVS 998
             + N  PC  + K  +  V +S D    N     P KKR L  + ++
Sbjct: 235 T-APNKVPCNQIDK-NAESVSYSRDSSAPNTNAAWPVKKRKLLHDEMA 280


>ref|XP_002299614.1| predicted protein [Populus trichocarpa] gi|222846872|gb|EEE84419.1|
            predicted protein [Populus trichocarpa]
          Length = 312

 Score =  209 bits (532), Expect = 1e-51
 Identities = 126/314 (40%), Positives = 174/314 (55%), Gaps = 17/314 (5%)
 Frame = +3

Query: 123  DNLEFSWGYKLGKGGVNNNVHMYESFTFDGVEYSLFDCVYMWRDDLHEPNVGKLVKVWET 302
            +N  F WG K G G +N  +  YESFT+DGV+Y L DCV  +R+     N+GKLV+++ET
Sbjct: 11   ENQIFKWGTKRGVGRLNKEIQFYESFTYDGVKYCLHDCVCFYREGDSGTNIGKLVQIFET 70

Query: 303  PSHKKKVKTVWFFRPNEILNWLGDVKPLENELFLASGEGVGVFNINPLESICGKCEVVCT 482
             +H++ V+ VWFF P +I N+LGD KP  NELFLASG+G G+ N+N +ESI GKC VVC 
Sbjct: 71   AAHERMVRAVWFFCPKDIRNFLGDYKPNRNELFLASGKGKGLSNVNLVESIVGKCNVVCA 130

Query: 483  SDDRRNLQASEEELKKADYIFYRTFDVGSYKISKNFSFDSIAGHQVEHFFNKRNDQ---- 650
            S+D+RN QASE++L+ ADYIFYR+FDVG+ +IS++F+ D I G +VE +FNKR +Q    
Sbjct: 131  SNDQRNPQASEQQLEMADYIFYRSFDVGTCRISESFA-DQICGFKVELYFNKRRNQMLGN 189

Query: 651  ------KLKRLN----VEANLNQDARKVGNPAKAVKYNYSDRTVSARELETASSLGKKDH 800
                  K+K L     V   +N+ A K G   ++        +   +E +T +++  K H
Sbjct: 190  HGTLEPKVKELTGKSIVLEKMNRHAVKDGKSGRS--------SPVVKESKTRTNMDDKQH 241

Query: 801  F---PYENTGLRPKAILKPVRNGSANTSPCRLVVKTTSRKVRFSEDLPHANEPDMHPSKK 971
            F   PY                                 K +FSED    N    HP KK
Sbjct: 242  FSNKPY---------------------------------KSKFSEDPWPPNASCTHPYKK 268

Query: 972  RMLFKNSVSLGSNE 1013
            R L        S+E
Sbjct: 269  RKLLGEKACQISDE 282


>emb|CBI36241.3| unnamed protein product [Vitis vinifera]
          Length = 538

 Score =  209 bits (531), Expect = 1e-51
 Identities = 133/364 (36%), Positives = 191/364 (52%), Gaps = 1/364 (0%)
 Frame = +3

Query: 102  HEIKSEQDNLEFSWGYKLGKGGVNNNVHMYESFTFDGVEYSLFDCVYMWRDDLHEPNVGK 281
            H  ++ + + +F WG K G GG N ++  YESFT+DGVEYSL+DCVY+++    E  +GK
Sbjct: 24   HPSRANEHSYDFKWGIKSGMGGKNRDLQFYESFTYDGVEYSLYDCVYLYQTGQLETYIGK 83

Query: 282  LVKVWETPSHKKKVKTVWFFRPNEILNWLGDVKPLENELFLASGEGVGVFNINPLESICG 461
            LV++WETP+ +KKVK VWFFRP +I   LGD  P  NE+FLASGEG G+ NIN LE++ G
Sbjct: 84   LVRIWETPTREKKVKIVWFFRPVDIRRHLGDDVPHWNEIFLASGEGKGISNINALEALGG 143

Query: 462  KCEVVCTSDDRRNLQASEEELKKADYIFYRTFDVGSYKISKNFSFDSIAGHQVEHFFNKR 641
            KC+VVCTS+D+RN + S+ EL++ADYIFYRTFD+GS KIS NF+ D I G          
Sbjct: 144  KCKVVCTSNDKRNPRVSQVELREADYIFYRTFDIGSLKISDNFA-DLIDG---------- 192

Query: 642  NDQKLKRLNVEANLNQDARKVGNPAKAVKYNYSDRTVSARELETASSLGKKDHFPYENTG 821
                     ++ANL    + + + +K+         +  R+L  ++          E  G
Sbjct: 193  ---------IKANLEVRTQTIDSTSKSDMSTLDMWPLKKRKLLLSTE--------KELPG 235

Query: 822  LRPKAILKPVRNGSANTSPCRLVVKTTSRKVRFSEDLPHANEPDMHPSKKRMLFKNSVSL 1001
            L P            NTSP   + + ++ +      +    +P+          K +VS 
Sbjct: 236  LGP------------NTSPPSELEERSNMRTLLPLRIASKRDPE----------KLTVS- 272

Query: 1002 GSNEELANCADLLPSLPDHIQNLLNFKHCTDEG-GLSKGVNINTKASTNIDNRGNQSEHP 1178
                        LP LP H +  LN K  T +     K V  + KA T  D   +Q    
Sbjct: 273  ------------LPGLPKHEEKNLNPKDSTSQNRARPKKVKFDEKAITIPDKAASQPAQN 320

Query: 1179 KGLR 1190
            +G++
Sbjct: 321  EGIK 324


>ref|XP_002308622.1| predicted protein [Populus trichocarpa] gi|222854598|gb|EEE92145.1|
           predicted protein [Populus trichocarpa]
          Length = 545

 Score =  207 bits (527), Expect = 4e-51
 Identities = 107/224 (47%), Positives = 142/224 (63%)
 Frame = +3

Query: 123 DNLEFSWGYKLGKGGVNNNVHMYESFTFDGVEYSLFDCVYMWRDDLHEPNVGKLVKVWET 302
           +N+EF WG + G GG   +V  YESF++DGVEY+L+D VYM+ +   EP +GKL+K+WE 
Sbjct: 8   ENIEFKWGKQRGVGGKKKDVKFYESFSYDGVEYALYDSVYMYEEGETEPYIGKLLKIWEN 67

Query: 303 PSHKKKVKTVWFFRPNEILNWLGDVKPLENELFLASGEGVGVFNINPLESICGKCEVVCT 482
               KKVK +WFF P EI N+LGD K  ENELFLASGEGVG  N+NPLE+I GKC VVC+
Sbjct: 68  ADKTKKVKVLWFFCPREISNYLGDEKTAENELFLASGEGVGSTNVNPLEAIAGKCNVVCS 127

Query: 483 SDDRRNLQASEEELKKADYIFYRTFDVGSYKISKNFSFDSIAGHQVEHFFNKRNDQKLKR 662
           S D RN Q S+EEL++AD++FYRTFDVG+ +I      D IAG +V+   N+  +Q    
Sbjct: 128 SKDSRNPQPSDEELQEADFVFYRTFDVGNCRILDKID-DKIAGIEVKFLLNRVGNQS--- 183

Query: 663 LNVEANLNQDARKVGNPAKAVKYNYSDRTVSARELETASSLGKK 794
                  +    K+ +  K V  N+     +     T S LG+K
Sbjct: 184 -------SSGVPKLDSKKKEVSGNFVATNDTRILTRTESYLGEK 220


Top