BLASTX nr result

ID: Bupleurum21_contig00029027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029027
         (1007 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264031.1| PREDICTED: probable beta-D-xylosidase 6-like...   449   e-124
ref|XP_003612944.1| Beta-D-xylosidase [Medicago truncatula] gi|3...   444   e-122
emb|CBI25718.3| unnamed protein product [Vitis vinifera]              444   e-122
ref|XP_002527212.1| beta-glucosidase, putative [Ricinus communis...   442   e-122
gb|AFI25186.1| putative beta-D-xylosidase [Nicotiana tabacum]         439   e-121

>ref|XP_002264031.1| PREDICTED: probable beta-D-xylosidase 6-like [Vitis vinifera]
          Length = 789

 Score =  449 bits (1155), Expect = e-124
 Identities = 213/328 (64%), Positives = 262/328 (79%), Gaps = 1/328 (0%)
 Frame = +1

Query: 22   SFHFKYLIVTCLFTLKCLHTTSQTINPDLEYPCKPPYNS-YPFCDTSLPITTRAESIISL 198
            S  +++L +     +  L + S++ +P  ++PC PP NS YPFC+TSLPI+TRA+S++SL
Sbjct: 2    STEWRFLFICLFLQVLPLFSISESTHP--QFPCMPPTNSDYPFCNTSLPISTRAQSLVSL 59

Query: 199  LTLPEKIQQLCNNASGIPRLGIPAYEWWSESLHGIATNGPGVNFNGSIQAATSFPQVIVQ 378
            LTL EKIQQL + A+ IPRL IPAYEWWSESLHGIATNGPGV+FNG++ AATSFPQV++ 
Sbjct: 60   LTLSEKIQQLSDEAAAIPRLYIPAYEWWSESLHGIATNGPGVSFNGTVSAATSFPQVLLT 119

Query: 379  ASAFNRTLWFXXXXXXGVEARAMYNVGQAGLTYWAPNINIFRDPRWGRGQESPGEDPMVV 558
            A++FNR+LWF       VEARAMYNVGQAGLT+WAPNINIFRDPRWGRGQE+PGEDPMV 
Sbjct: 120  AASFNRSLWFSIGSAIAVEARAMYNVGQAGLTFWAPNINIFRDPRWGRGQETPGEDPMVA 179

Query: 559  SSFAIEFVRGFQREXXXXXXXXXXXXXXKRSLSDGGGDGNTGLMLSACCKHFTAYDLELW 738
            S++A+EFVRGFQ                KR L  G  DG+ GLMLSACCKH TAYDLE W
Sbjct: 180  SAYAVEFVRGFQGGNWKGGDEIRGAVGKKRVLR-GDSDGD-GLMLSACCKHLTAYDLEKW 237

Query: 739  HSFARYNFNAVVTEQDMQDTYQPPFQSCIEQGKASCLMCSYNAVNGIPACADKELLQKAR 918
             +F+RY+F+AVV+ QD++DTYQPPF+SC++QGKASCLMCSYN VNG+PACA ++L QKA+
Sbjct: 238  GNFSRYSFDAVVSNQDLEDTYQPPFRSCVQQGKASCLMCSYNRVNGVPACARQDLFQKAK 297

Query: 919  NDWSFKGYITSDCDAVATIYEYQNYTRS 1002
             +W FKGYITSDCDAVAT+YEYQ+Y  S
Sbjct: 298  TEWGFKGYITSDCDAVATVYEYQHYANS 325


>ref|XP_003612944.1| Beta-D-xylosidase [Medicago truncatula] gi|355514279|gb|AES95902.1|
            Beta-D-xylosidase [Medicago truncatula]
          Length = 783

 Score =  444 bits (1142), Expect = e-122
 Identities = 207/321 (64%), Positives = 251/321 (78%)
 Frame = +1

Query: 43   IVTCLFTLKCLHTTSQTINPDLEYPCKPPYNSYPFCDTSLPITTRAESIISLLTLPEKIQ 222
            I+  LF+L  +H       PD  YPCKPP++ YPFC+ SLPI+TR  S+ISLLTL +KI 
Sbjct: 10   IIIFLFSLLLIHLPKFFTTPD--YPCKPPHSHYPFCNISLPISTRTTSLISLLTLSDKIN 67

Query: 223  QLCNNASGIPRLGIPAYEWWSESLHGIATNGPGVNFNGSIQAATSFPQVIVQASAFNRTL 402
            QL N AS I  LGIP+Y+WWSE+LHGIATNGPGVNFNGS+++AT+FPQVIV A+AFNR+L
Sbjct: 68   QLSNTASSISHLGIPSYQWWSEALHGIATNGPGVNFNGSVKSATNFPQVIVSAAAFNRSL 127

Query: 403  WFXXXXXXGVEARAMYNVGQAGLTYWAPNINIFRDPRWGRGQESPGEDPMVVSSFAIEFV 582
            WF      GVE RAM+NVGQAGL++WAPN+N+FRDPRWGRGQE+PGEDPMV S++A+EFV
Sbjct: 128  WFLIGYAVGVEGRAMFNVGQAGLSFWAPNVNVFRDPRWGRGQETPGEDPMVGSAYAVEFV 187

Query: 583  RGFQREXXXXXXXXXXXXXXKRSLSDGGGDGNTGLMLSACCKHFTAYDLELWHSFARYNF 762
            RG Q                K+ L+D   D + GLM+SACCKHFTAYDLE W  F+RYNF
Sbjct: 188  RGIQ-----------GVDGIKKVLNDHDSD-DDGLMVSACCKHFTAYDLEKWGEFSRYNF 235

Query: 763  NAVVTEQDMQDTYQPPFQSCIEQGKASCLMCSYNAVNGIPACADKELLQKARNDWSFKGY 942
            NAVVT+QD++DTYQPPF+ C++QGKASCLMCSYN VNG+PACA K+LL   RN W F+GY
Sbjct: 236  NAVVTQQDLEDTYQPPFRGCVQQGKASCLMCSYNEVNGVPACASKDLLGLVRNKWGFEGY 295

Query: 943  ITSDCDAVATIYEYQNYTRSA 1005
            I SDCDAVAT++EYQ Y +SA
Sbjct: 296  IASDCDAVATVFEYQKYAKSA 316


>emb|CBI25718.3| unnamed protein product [Vitis vinifera]
          Length = 768

 Score =  444 bits (1141), Expect = e-122
 Identities = 210/328 (64%), Positives = 259/328 (78%), Gaps = 1/328 (0%)
 Frame = +1

Query: 22   SFHFKYLIVTCLFTLKCLHTTSQTINPDLEYPCKPPYNS-YPFCDTSLPITTRAESIISL 198
            S  +++L +     +  L + S++ +P  ++PC PP NS YPFC+TSLPI+TRA+S++SL
Sbjct: 2    STEWRFLFICLFLQVLPLFSISESTHP--QFPCMPPTNSDYPFCNTSLPISTRAQSLVSL 59

Query: 199  LTLPEKIQQLCNNASGIPRLGIPAYEWWSESLHGIATNGPGVNFNGSIQAATSFPQVIVQ 378
            LTL EKIQQL + A+ IPRL IPAYEWWSESLHGIATNGPGV+FNG++ AATSFPQV++ 
Sbjct: 60   LTLSEKIQQLSDEAAAIPRLYIPAYEWWSESLHGIATNGPGVSFNGTVSAATSFPQVLLT 119

Query: 379  ASAFNRTLWFXXXXXXGVEARAMYNVGQAGLTYWAPNINIFRDPRWGRGQESPGEDPMVV 558
            A++FNR+LWF       VEARAMYNVGQAGLT+WAPNINIFRDPRWGRGQE+PGEDPMV 
Sbjct: 120  AASFNRSLWFSIGSAIAVEARAMYNVGQAGLTFWAPNINIFRDPRWGRGQETPGEDPMVA 179

Query: 559  SSFAIEFVRGFQREXXXXXXXXXXXXXXKRSLSDGGGDGNTGLMLSACCKHFTAYDLELW 738
            S++A+EFVRGFQ                      G  DG+ GLMLSACCKH TAYDLE W
Sbjct: 180  SAYAVEFVRGFQ----------------------GDSDGD-GLMLSACCKHLTAYDLEKW 216

Query: 739  HSFARYNFNAVVTEQDMQDTYQPPFQSCIEQGKASCLMCSYNAVNGIPACADKELLQKAR 918
             +F+RY+F+AVV+ QD++DTYQPPF+SC++QGKASCLMCSYN VNG+PACA ++L QKA+
Sbjct: 217  GNFSRYSFDAVVSNQDLEDTYQPPFRSCVQQGKASCLMCSYNRVNGVPACARQDLFQKAK 276

Query: 919  NDWSFKGYITSDCDAVATIYEYQNYTRS 1002
             +W FKGYITSDCDAVAT+YEYQ+Y  S
Sbjct: 277  TEWGFKGYITSDCDAVATVYEYQHYANS 304


>ref|XP_002527212.1| beta-glucosidase, putative [Ricinus communis]
            gi|223533388|gb|EEF35138.1| beta-glucosidase, putative
            [Ricinus communis]
          Length = 349

 Score =  442 bits (1137), Expect = e-122
 Identities = 212/334 (63%), Positives = 260/334 (77%), Gaps = 6/334 (1%)
 Frame = +1

Query: 22   SFHFKYLIVTCLFTLKCLHTTSQTINPDLEYPCKPP-YNSYPFCDTSLPITTRAESIISL 198
            + + + L  +C+   +   + S + +  L+YPC+PP +NSY FC+ SL + TRA S+ISL
Sbjct: 2    TLYLRSLFFSCIVLFEL--SVSNSESHKLQYPCQPPLHNSYTFCNQSLSVPTRAHSLISL 59

Query: 199  LTLPEKIQQLCNNASGIPRLGIPAYEWWSESLHGIATNGPGVNFN-GSIQAATSFPQVIV 375
            LTL EKI+QL +NASGIPR GIP YEWWSESLHGIA NGPGV+F  G + AAT FPQVI+
Sbjct: 60   LTLEEKIKQLSDNASGIPRFGIPPYEWWSESLHGIAINGPGVSFTIGPVSAATGFPQVII 119

Query: 376  QASAFNRTLWFXXXXXXGVEARAMYNVGQAGLTYWAPNINIFRDPRWGRGQESPGEDPMV 555
             A+AFNRTLWF       +EARAM+NVGQ+GLT+WAPN+NIFRDPRWGRGQE+PGEDPM+
Sbjct: 120  SAAAFNRTLWFLIGSAIAIEARAMHNVGQSGLTFWAPNVNIFRDPRWGRGQETPGEDPML 179

Query: 556  VSSFAIEFVRGFQ----REXXXXXXXXXXXXXXKRSLSDGGGDGNTGLMLSACCKHFTAY 723
             S++AIEFV+GFQ    +               KR L D   DG+ GLMLSACCKH TAY
Sbjct: 180  TSAYAIEFVKGFQGGNWKSGVSGSGSGRYGFGEKRMLRDD--DGDDGLMLSACCKHLTAY 237

Query: 724  DLELWHSFARYNFNAVVTEQDMQDTYQPPFQSCIEQGKASCLMCSYNAVNGIPACADKEL 903
            DLE W +F+RY+FNAVVTEQD++DTYQPPF+SCIE+GKASCLMCSYN VNG+PACA ++L
Sbjct: 238  DLEKWGNFSRYSFNAVVTEQDLEDTYQPPFRSCIEEGKASCLMCSYNEVNGVPACAREDL 297

Query: 904  LQKARNDWSFKGYITSDCDAVATIYEYQNYTRSA 1005
            LQKAR +W F+GYI SDCDAVATI+EYQNY++SA
Sbjct: 298  LQKAREEWGFEGYIVSDCDAVATIFEYQNYSKSA 331


>gb|AFI25186.1| putative beta-D-xylosidase [Nicotiana tabacum]
          Length = 791

 Score =  439 bits (1130), Expect = e-121
 Identities = 208/325 (64%), Positives = 245/325 (75%)
 Frame = +1

Query: 28   HFKYLIVTCLFTLKCLHTTSQTINPDLEYPCKPPYNSYPFCDTSLPITTRAESIISLLTL 207
            HF  LI+       C+H T    NP  ++PC+PP++ Y FC+ +LPI+TR +S+ISLLT+
Sbjct: 6    HFLLLIIRLNILGFCVHLTKS--NPQPQFPCQPPHHKYTFCNKNLPISTRVQSLISLLTI 63

Query: 208  PEKIQQLCNNASGIPRLGIPAYEWWSESLHGIATNGPGVNFNGSIQAATSFPQVIVQASA 387
             EKI  L +N + IPRLG+PAYEWWSESLHGIATNGP VNFNG I+  TSFPQVI+ A+A
Sbjct: 64   DEKILHLSDNTTSIPRLGLPAYEWWSESLHGIATNGPAVNFNGQIKGVTSFPQVILTAAA 123

Query: 388  FNRTLWFXXXXXXGVEARAMYNVGQAGLTYWAPNINIFRDPRWGRGQESPGEDPMVVSSF 567
            FNRTLW        VEARAMYN+GQAGLT+WAPNINI RDPRWGRGQE+PGEDPMVVS++
Sbjct: 124  FNRTLWHSIATAIAVEARAMYNLGQAGLTFWAPNINILRDPRWGRGQETPGEDPMVVSAY 183

Query: 568  AIEFVRGFQREXXXXXXXXXXXXXXKRSLSDGGGDGNTGLMLSACCKHFTAYDLELWHSF 747
            AIE+V GFQ                KR +     +    LMLSACCKHFTAYDLE W   
Sbjct: 184  AIEYVTGFQGLNPKAKKGNRNGYGKKRRVLKEDDNDGERLMLSACCKHFTAYDLEKWGDA 243

Query: 748  ARYNFNAVVTEQDMQDTYQPPFQSCIEQGKASCLMCSYNAVNGIPACADKELLQKARNDW 927
             RY+FNAVVT+QDM+DT+Q PF+SCI+QGKASCLMCSYN+VNG+PACADKELL K R DW
Sbjct: 244  TRYDFNAVVTKQDMEDTFQAPFRSCIQQGKASCLMCSYNSVNGVPACADKELLDKVRTDW 303

Query: 928  SFKGYITSDCDAVATIYEYQNYTRS 1002
             F GYITSDCDAVATIYE Q YT++
Sbjct: 304  GFDGYITSDCDAVATIYENQKYTKT 328


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